FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.730e-40
Identity = 95/219 (43.38%), Postives = 137/219 (62.56%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASS--QGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD---RDPLEWSARRKIAVGAARGLRYLHEECRVGC--IVHRDMRPNNILVTHDFEPLVGDFGLARWQP-DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F+Y ELE AT  FSE + + +G F  V +G+L DG VVAVK+   AS   +  +EF +E+++LS   H +++ L+G+C +   RLLVYE++ +GSL  HL+G+D   +  L W+ R  IAV AARG+ YLH      C  ++HRD++ +NIL+  D    V DFGL+   P D    +     GT GYL PEY +   +T K+DVYS GVVL+E+++GR
Sbjct:  493 FSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLH---GYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGR 708          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.260e-40
Identity = 96/214 (44.86%), Postives = 124/214 (57.94%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLY--GRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            R F   ELE AT  FS    L EGG  +V++G+L DG++VAVK+ K+      +EF +EV +LS   HRN+V L+G C+E    +LVYE+I NG+L  HL+    D     W  R +IAV  A  L YLH       I HRD++  NI++       V DFG +R        + T V GT GY+ PEY QS Q T+K+DVYS GVVL ELITG
Sbjct:  419 RVFNSRELEKATENFSLTRILGEGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAAS-SPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITG 631          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.952e-40
Identity = 90/231 (38.96%), Postives = 137/231 (59.31%), Query Frame = 3
Query:   33 KAPVFGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLA-------SSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRR--LLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            ++ ++  P   FT  ++  AT  F ++  +  G   +V++ V+P G+ +AVK+ +         S+  D  F +E+  L   +HRN+V L  FC   G    LL+YEY+  GSL   L+G     ++W  R  IA+GAA GL YLH +C+   I+HRD++ NNIL+  +FE  VGDFGLA+          + V G++GY+APEYA + ++TEK D+YS GVVL+EL+TG+
Sbjct:  796 ESDIYFVPKERFTVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELLHGGKSHSMDWPTRFAIALGAAEGLAYLHHDCKPR-IIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGK 1025          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.952e-40
Identity = 103/240 (42.92%), Postives = 143/240 (59.58%), Query Frame = 3
Query:    3 PPPLCSTCQHKAPVFGNPP------RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP-DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            PPPL +    K+    + P      R  TY E+   TN F     L +GGF +V+ G L DG  VAVK    +S+QG +EF +EVE+L    HR++V L+G+C +     L+YEY+ NG L  ++ G R  + L W  R +IAV AA+GL YLH  CR   +VHRD++  NIL+       + DFGL+R  P DG+  V T V GT GYL PEY ++  ++EK+DVYS GVVL+E++T +
Sbjct:  547 PPPLVTPGIVKSETRSSNPSIITRERKITYPEVLKMTNNFERV--LGKGGFGTVYHGNL-DGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPP-MVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQ 782          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.952e-40
Identity = 92/216 (42.59%), Postives = 134/216 (62.04%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP-LEWSARRKIAVGAARGLRYLHEECRVGC---IVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FTY+E+   T  F     L +GGF  V+ G +   + VAVK    +S+QG +EF +EV++L    H N+V L+G+C E     LVYE++ NG L  HL G+  +  + WS R +IA+ AA GL YLH    +GC   +VHRD++  NIL+  +F+  + DFGL+R +Q +G+    T + GT GYL PE   SG++ EK+DVYS G+VL+E+IT +
Sbjct:  554 FTYSEVVQVTKNFQRV--LGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLH----IGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQ 763          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.952e-40
Identity = 98/233 (42.06%), Postives = 139/233 (59.66%), Query Frame = 3
Query:   48 GNPPRW--FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLAS------------SQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP---DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            GNP +   F+  EL LAT+ FS    L  G F SV++GVL DG+ VA+K+ +L +            +  D  F +E+E +S   H+N+V L+GF  +   R+LVYEY+ NGSL  HL+    DPL W  R  IA+ AARG++YLHE   V  ++HRD++ +NIL+   +   V DFGL++  P   D    +     GT GY+ PEY +  Q+T K+DVYS GVVL+EL++G
Sbjct:  423 GNPGQLMEFSIDELALATDGFSVRFHLGIGSFGSVYQGVLSDGRHVAIKRAELTNPTLSGTTMRHRRADKDSAFVNELESMSRLNHKNLVRLLGFYEDTEERILVYEYMKNGSLADHLHNPQFDPLSWQTRLMIALDAARGIQYLHEFI-VPPVIHRDIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSG 654          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.855e-40
Identity = 91/212 (42.92%), Postives = 131/212 (61.79%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FT   ++ AT+ + E   L +GG  +V++G+LPD  +VA+K+ +L  +   ++F +EV VLS   HRNVV L+G C+E    LLVYE+I +G+L  HL+G   D  L W  R ++AV  A  L YLH    +  I+HRD++  NIL+  +    V DFG +R  P     + T V GT GYL PEY  +G + EK+DVYS GVVL+EL++G+
Sbjct:  398 FTEEGMKEATDGYDENRILGQGGQGTVYKGILPDNSIVAIKKARLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIP-IIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQ 608          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40
Identity = 89/214 (41.59%), Postives = 137/214 (64.02%), Query Frame = 3
Query:   75 AELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD---PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRV---LGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            ++L  AT  F + N +A G   ++++G L DG ++ +K+ +  S + ++EF +E++ L   ++RN+V L+G+CV +  RLL+YEY+ NG L   L+  D +   PL+W +R KIA+G A+GL +LH  C    I+HR++    IL+T +FEP + DFGLAR     D  + T V    G FGY+APEY+++   T K DVYS GVVL+EL+TG+
Sbjct:  294 SDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQ-DSQRSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPR-IIHRNISSKCILLTAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQ 505          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40
Identity = 97/215 (45.12%), Postives = 134/215 (62.33%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP-DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R  TY E+   TN F     L +GGF +V+ G L D QV AVK    +S+QG +EF +EVE+L    HRN+V L+G+C +     L+YEY+ NG L  ++ G R  + L W  R +IAV AA+GL YLH  C    +VHRD++  NIL+   +   + DFGL+R  P DG+  V T V GT GYL PEY ++  ++EK+DVYS GVVL+E++T +
Sbjct:  554 RRITYPEVLKMTNNFERV--LGKGGFGTVYHGNLEDTQV-AVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGC-TPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQ 764          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40
Identity = 94/211 (44.55%), Postives = 127/211 (60.19%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            F+  ELE AT+ F+    L +GG  +V++G+L DG++VAVK+ K+      +EF +EV VLS   HRN+V L+G C+E    +LVYE+I NG L   L+    D  + W  R +I+V  A  L YLH       + HRD++  NIL+   +   V DFG +R        + T V GTFGYL PEY Q+ Q T+K+DVYS GVVLVELITG
Sbjct:  409 FSSKELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTP-VYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITG 618          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRI4_MAIZE1.730e-4043.38Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
WAKLJ_ARATH2.260e-4044.86Wall-associated receptor kinase-like 10 OS=Arabido... [more]
Y2317_ARATH2.952e-4038.96Probable leucine-rich repeat receptor-like protein... [more]
Y1518_ARATH2.952e-4042.92Probable LRR receptor-like serine/threonine-protei... [more]
RLK7_ARATH2.952e-4042.59Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
ACCR4_ARATH2.952e-4042.06Serine/threonine-protein kinase-like protein CCR4 ... [more]
WAK4_ARATH3.855e-4042.92Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
Y5838_ARATH5.035e-4041.59Probably inactive leucine-rich repeat receptor-lik... [more]
Y5188_ARATH5.035e-4045.12Probable LRR receptor-like serine/threonine-protei... [more]
WAKLI_ARATH5.035e-4044.55Wall-associated receptor kinase-like 22 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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