FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40
Identity = 91/216 (42.13%), Postives = 129/216 (59.72%), Query Frame = 3
Query:   51 NPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            N  + F+  +LE AT+RF+ +  L +GG  +V++G+L DG +VAVK+ K    +  +EF +E+ +LS   HRNVV ++G C+E    +LVYE+I N +L  HL+    D P+ W  R  IA   A  L YLH    +  I HRD++  NIL+       V DFG++R     D  + T V GT GY+ PEY QS   T K+DVYS GV+L+EL+TG
Sbjct:  373 NRTKVFSSNDLENATDRFNASRILGQGGQGTVYKGMLEDGMIVAVKKSKALKEENLEEFINEIILLSQINHRNVVKILGCCLETEVPILVYEFIPNRNLFDHLHNPSEDFPMSWEVRLCIACEVADALSYLHSAVSIP-IYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTG 587          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40
Identity = 91/212 (42.92%), Postives = 131/212 (61.79%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FT   ++ ATN + E+  L +GG  +V++G+LPD  +VA+K+ +L +    ++F +EV VLS   HRNVV ++G C+E    LLVYE+I +G+L  HL+G   D  L W  R +IA   A  L YLH    +  I+HRD++  NIL+  +    V DFG +R  P     + T V GT GYL PEY  +G + EK+DVYS GVVL+EL++G+
Sbjct:  392 FTEKGMKEATNGYHESRILGQGGQGTVYKGILPDNSIVAIKKARLGNRSQVEQFINEVLVLSQINHRNVVKVLGCCLETEVPLLVYEFINSGTLFDHLHGSLYDSSLTWEHRLRIATEVAGSLAYLHSSASIP-IIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQ 602          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.035e-40
Identity = 95/233 (40.77%), Postives = 136/233 (58.37%), Query Frame = 3
Query:   18 STCQHKAPVFGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQ--GDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETR----VLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            +TCQ+  P F    + F+ AEL+LATN FSE N L EG   SV+R  LPDGQ   V+   ++S     +++F   ++  S  +H N+V L+GFC+E+G  LLVYEY+ + SL + ++     PL W  R +IA+G AR L YLH       I H D++  NIL+  +  P + D GLA  +P     V+ R     +   GY+APE+ Q G    K+D Y+LGV+L+EL+TGR
Sbjct:  392 ATCQY--PSFA---KLFSAAELQLATNCFSEENLLGEGPLGSVYRAKLPDGQFAVVRNIPMSSLSLHEEEQFTEVLQTASKLRHPNIVTLLGFCIENGEHLLVYEYVGHLSLYNAMHDEVYKPLSWGLRLRIAIGVARALDYLHSSF-CPPIAHSDLKATNILLDEELTPRIADCGLASLRPLTSNSVKLRASEIAIQNTGYIAPEHGQPGSSGTKSDTYALGVLLLELLTGR 618          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.575e-40
Identity = 94/214 (43.93%), Postives = 130/214 (60.75%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGR-DRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMG-VETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FTY+E+   T        L EGGF  V+ G L   + VAVK     S+QG +EF +EVE+L    H N+V L+G+C E     L+YEY+ NG L  HL G+     L W  R +IA+ AA GL YLH  C+   +VHRD++  NIL+  +F+  + DFGL+R +Q  GD   V T V GT GYL PEY  + +++EK+DVYS G++L+E+IT +
Sbjct:  556 FTYSEVMEMTKNLQRP--LGEGGFGVVYHGDLNGSEQVAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCK-PAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQ 766          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 8.588e-40
Identity = 96/215 (44.65%), Postives = 136/215 (63.26%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR-DPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP-DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R FTY+E+   T  F     L +GGF +V+ G L D QV AVK    +S+QG +EF +EVE+L    HR++V L+G+C +     L+YEY+  G L  ++ G+   + L W  R +IAV AA+GL YLH  CR   +VHRD++P NIL+    +  + DFGL+R  P DG+  V T V GT GYL PEY ++  ++EK+DVYS GVVL+E++T +
Sbjct:  558 RKFTYSEVLKMTKNFERV--LGKGGFGTVYHGNLDDTQV-AVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPP-MVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQ 768          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.588e-40
Identity = 94/212 (44.34%), Postives = 129/212 (60.85%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMG-VETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            +TYAE+   T +F     L +GGF  V+ G +   + VAVK    +S+QG +EF +EVE+L    H N+V L+G+C E     L+Y+Y+ NG L  H  G     + W  R  IAV AA GL YLH  C+   IVHRD++ +NIL+    +  + DFGL+R  P GD   V T V GTFGYL  EY Q+ +++EK+DVYS GVVL+E+IT +
Sbjct:  560 YTYAEVLAMTKKFERV--LGKGGFGMVYHGYINGTEEVAVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDHLALIYQYMVNGDLKKHFSG--SSIISWVDRLNIAVDAASGLEYLHIGCK-PLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNK 766          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.588e-40
Identity = 85/198 (42.93%), Postives = 130/198 (65.66%), Query Frame = 3
Query:  105 SEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            +E + +  GGF +V++  + DG+V A+K+    +   D+ F  E+E+L   +HR +V L G+C     +LL+Y+Y+  GSLD  L+ R  + L+W +R  I +GAA+GL YLH +C    I+HRD++ +NIL+  + E  V DFGLA+   D +  + T V GTFGYLAPEY QSG+ TEK DVYS GV+++E+++G+
Sbjct:  307 NEEHIIGCGGFGTVYKLAMDDGKVFALKRILKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHERG-EQLDWDSRVNIIIGAAKGLSYLHHDCSPR-IIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGK 502          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.122e-39
Identity = 89/212 (41.98%), Postives = 130/212 (61.32%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FT  +++ ATN +  +  L +GG  +V++G+LPD  +VA+K+ +L  +   ++F +EV VLS   HRNVV L+G C+E    LLVYE+I  GSL  HL+G      L W  R +IA+  A  + YLH    +  I+HRD++  NIL+  +    V DFG ++ +P     + T V GT GYL PEY  +  + EK+DVYS GVVL+ELI+G+
Sbjct:   96 FTEEDMKEATNGYDVSRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNNQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITGGSLFDHLHGSMFVSSLTWEHRLEIAIEVAGAIAYLHSGASIP-IIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQ 306          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.122e-39
Identity = 93/213 (43.66%), Postives = 127/213 (59.62%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            R F+  ELE AT+ F++   L +GG  +V++G+L DG++VAVK+ K       +EF +EV VL+   HRN+V L+G C+E    +LVYE++ NG L   L+    D  + W  R  IA+  A  L YLH       I HRD++  NIL+       V DFG +R        + T+V GTFGY+ PEY QS + TEK+DVYS GVVLVEL+TG
Sbjct:  402 RIFSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFP-IYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTG 613          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.465e-39
Identity = 92/218 (42.20%), Postives = 132/218 (60.55%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPL-EWSARRKIAVGAARGLRYLHEECRVGC---IVHRDMRPNNILVTHDFEPLVGDFGLARWQP-DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R FTY+E+   TN F     + EGGF  V  G +   + VAVK    +S+QG +EF +EV++L    H N+V L+G+C E     L+YE++ NG L  HL G+   P+  W  R +IA  AA GL YLH    +GC   +VHRD++  NIL+   ++  + DFGL+R  P  G+  V T + GT GYL PEY  + +++EK+DVYS G+VL+E+IT +
Sbjct:  568 RKFTYSEVTKMTNNFGRV--VGEGGFGVVCHGTVNGSEQVAVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGGKPIVNWGTRLRIAAEAALGLEYLH----IGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQ 779          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
WAKLG_ARATH5.035e-4042.13Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
WAK2_ARATH5.035e-4042.92Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
SRF2_ARATH5.035e-4040.77Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
MEE39_ARATH6.575e-4043.93Probable LRR receptor-like serine/threonine-protei... [more]
Y5189_ARATH8.588e-4044.65Probable LRR receptor-like protein kinase At1g5189... [more]
Y1756_ARATH8.588e-4044.34Probable LRR receptor-like serine/threonine-protei... [more]
FEI1_ARATH8.588e-4042.93LRR receptor-like serine/threonine-protein kinase ... [more]
WAKLS_ARATH1.122e-3941.98Putative wall-associated receptor kinase-like 16 O... [more]
WAKLB_ARATH1.122e-3943.66Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
Y5596_ARATH1.465e-3942.20Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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