FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.749e-49
Identity = 100/212 (47.17%), Postives = 140/212 (66.04%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGR-DRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F+Y  LE AT+ FS+ N L +GG  SV++GVL +G+ VAVK+    + Q    F +EV ++S   H+N+V L+G  +     LLVYEYI N SL  +L+ R D  PL W+ R KI +G A G+ YLHEE  +  I+HRD++ +NIL+  DF P + DFGLAR  P+    + T + GT GY+APEY   G++TEKADVYS GV+++E+ITG+
Sbjct:  311 FSYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLFFNTKQWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLR-IIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGK 521          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.749e-49
Identity = 100/205 (48.78%), Postives = 140/205 (68.29%), Query Frame = 3
Query:   90 ATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            ATN FS  N L +GGF SV++G+LP GQ +AVK+ +  S QG  EF +EV +L+  QHRN+V L+GFC E    +LVYE++ N SLD  ++  + R  L W  R  I  G ARGL YLHE+ ++  I+HRD++ +NIL+  +  P V DFG+AR +  D   G  +RV+GT+GY+APEYA  GQ + K+DVYS GV+L+E+I+G+
Sbjct:  341 ATNNFSLENKLGQGGFGSVYKGILPSGQEIAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKRRVLTWDVRYTIIEGVARGLLYLHEDSQLR-IIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGK 544          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.749e-49
Identity = 101/212 (47.64%), Postives = 143/212 (67.45%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            F    + +ATN FS  N L +GGF SV++G+LP GQ +AVK+    S QG+ EF +EV +L+  QHRN+V L+GFC E    +LVYE++ N SLD  ++  D R  L W  R +I  G ARGL YLHE+ ++  I+HRD++ +NIL+  +  P V DFG+AR +  D   G  +RV+GT+GY+APEY + GQ + K+DVYS GV+L+E+I+G
Sbjct:  328 FDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLR-IIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISG 538          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 7.749e-49
Identity = 103/214 (48.13%), Postives = 146/214 (68.22%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQ-EFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGR--DRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F+  EL++A++ FS  N L  GGF  V++G L DG +VAVK+ K   +QG + +F +EVE++S A HRN++ L GFC+    RLLVY Y+ NGS+ S L  R   + PL+W  R++IA+G+ARGL YLH+ C    I+HRD++  NIL+  +FE +VGDFGLA+     D  V T V GT G++APEY  +G+ +EK DV+  GV+L+ELITG+
Sbjct:  277 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 489          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.012e-48
Identity = 105/222 (47.30%), Postives = 141/222 (63.51%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPD----------GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGD-MGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FT+ EL+ AT  F + N L EGGF  V +G +            G VVAVKQ K    QG +E+ +EV  L    H N+V+L+G+C E   RLLVYE++  GSL++HL+ R   PL W+ R K+AVGAA+GL +LHE      +++RD +  NIL+  DF   + DFGLA+  P GD   V T+V+GT GY APEY  +G++T K+DVYS GVVL+ELI+GR
Sbjct:   74 FTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHE--AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGR 293          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.726e-48
Identity = 104/214 (48.60%), Postives = 144/214 (67.29%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQ-EFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD--PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F+  EL++AT+ FS  N L  GGF  V++G L DG +VAVK+ K   + G + +F +EVE++S A HRN++ L GFC+    RLLVY Y+ NGS+ S L  R     PL WS R++IA+G+ARGL YLH+ C    I+HRD++  NIL+  +FE +VGDFGLAR     D  V T V GT G++APEY  +G+ +EK DV+  G++L+ELITG+
Sbjct:  293 FSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 505          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.846e-48
Identity = 100/205 (48.78%), Postives = 138/205 (67.32%), Query Frame = 3
Query:   90 ATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR--DPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            AT+ FS+ N + +GGF +V++  LP  + VAVK+   A +QG++EF +E+E L   +H N+V L+G+C     +LLVYEY+ NGSLD  L  +    + L+WS R KIAVGAARGL +LH    +  I+HRD++ +NIL+  DFEP V DFGLAR     +  V T + GTFGY+ PEY QS + T K DVYS GV+L+EL+TG+
Sbjct:  913 ATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSEAKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGF-IPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGK 1116          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.023e-48
Identity = 106/221 (47.96%), Postives = 144/221 (65.16%), Query Frame = 3
Query:   45 FGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYK-LASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDP-LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FG   R F + EL+LAT+ FSE N L +GGF  V++GVLPD   VAVK+     S  GD  F  EVE++S A HRN++ LIGFC     RLLVY ++ N SL   L   +  DP L+W  R++IA+GAARG  YLHE C    I+HRD++  N+L+  DFE +VGDFGLA+        V T+V GT G++APEY  +G+ +E+ DV+  G++L+EL+TG+
Sbjct:  272 FGQLKR-FAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPK-IIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQ 490          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 5.023e-48
Identity = 101/214 (47.20%), Postives = 145/214 (67.76%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQ-EFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGR--DRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F+  EL++A++ FS  N L  GGF  V++G L DG +VAVK+ K   + G + +F +EVE++S A HRN++ L GFC+    RLLVY Y+ NGS+ S L  R   + PL+W  R++IA+G+ARGL YLH+ C    I+HRD++  NIL+  +FE +VGDFGLA+     D  V T V GT G++APEY  +G+ +EK DV+  G++L+ELITG+
Sbjct:  290 FSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQ 502          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.560e-48
Identity = 95/213 (44.60%), Postives = 146/213 (68.54%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F ++ +E ATN+FSE+N L  GGF  V++G L  G+ VA+K+    S+QG +EF +EV+V++  QHRN+  L+G+C++   ++LVYE++ N SLD  L+  + R  L+W  R KI  G ARG+ YLH + R+  I+HRD++ +NIL+  D  P + DFG+AR +  D       R++GT+GY++PEYA  G+ + K+DVYS GV+++ELITG+
Sbjct:  335 FQFSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRL-TIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGK 546          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK3_ARATH7.749e-4947.17Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
CRK37_ARATH7.749e-4948.78Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK36_ARATH7.749e-4947.64Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
BAK1_ARATH7.749e-4948.13BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
APK2A_ARATH1.012e-4847.30Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
SERK2_ARATH1.726e-4848.60Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
EXS_ARATH3.846e-4848.78Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y5129_ARATH5.023e-4847.96Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH5.023e-4847.20Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK25_ARATH6.560e-4844.60Cysteine-rich receptor-like protein kinase 25 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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