FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14954 contig Ccv1_Contig14954:702..1399. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.119e-47
Identity = 98/211 (46.45%), Postives = 136/211 (64.45%), Query Frame = 3
Query:   81 LELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYK--LASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD---PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            L   TN FS  N L  GGF  V++G L DG  +AVK+ +  + + +G  EF SE+ VL+  +HR++V L+G+C++   +LLVYEY+  G+L  HL+    +   PL W  R  +A+  ARG+ YLH        +HRD++P+NIL+  D    V DFGL R  P+G   +ETR+ GTFGYLAPEYA +G++T K DVYS GV+L+ELITGR
Sbjct:  581 LRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQS-FIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGR 790          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.461e-47
Identity = 95/213 (44.60%), Postives = 143/213 (67.14%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F +  +E ATN+F E N L +GGF  V++G+ P G  VAVK+    S QG++EF +EV V++  QHRN+V L+GFC+E   R+LVYE++ N SLD  ++    +  L+W+ R KI  G ARG+ YLH++ R+  I+HRD++  NIL+  D    + DFG+AR +  D       R++GT+GY++PEYA  GQ + K+DVYS GV+++E+I+G+
Sbjct:  339 FDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSRL-TIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGK 550          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.461e-47
Identity = 96/213 (45.07%), Postives = 139/213 (65.26%), Query Frame = 3
Query:   72 YAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVE---TRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            +  L+ AT+ FS  N L  GGF SV++GV   GQ +AVK+    S QGD EF +E+ +L+  QHRN+V L+GFC+E   R+LVYE+I N SLD+ ++  + R  L+W  R K+  G ARGL YLHE+ R   I+HRD++ +NIL+  +  P + DFGLA+             +++ GT+GY+APEYA  GQ + K DV+S GV+++E+ITG+
Sbjct:  351 FETLKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQLLDWGVRYKMIGGVARGLLYLHEDSRYR-IIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIITGK 562          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.461e-47
Identity = 98/211 (46.45%), Postives = 144/211 (68.25%), Query Frame = 3
Query:   72 YAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            Y  +  ATN+FSE N + +GGF  V++G   +G  VAVK+   +S QGD EF +EV V++  QHRN+V L+GF +  G R+LVYEY+ N SLD  L+    ++ L+W+ R K+  G ARG+ YLH++ R+  I+HRD++ +NIL+  D  P + DFGLAR +  D      +R++GTFGY+APEYA  GQ + K+DVYS GV+++E+I+G+
Sbjct:  327 YRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQDSRL-TIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEIISGK 536          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.909e-47
Identity = 103/214 (48.13%), Postives = 142/214 (66.36%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQ-EFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD--PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FT  EL +AT+ FS  N L  GGF  V++G L DG +VAVK+ K   ++G + +F +EVE++S A HRN++ L GFC+    RLLVY Y+ NGS+ S L  R      L+W  R+ IA+G+ARGL YLH+ C    I+HRD++  NIL+  +FE +VGDFGLA+     D  V T V GT G++APEY  +G+ +EK DV+  GV+L+ELITG+
Sbjct:  282 FTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 494          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.493e-47
Identity = 99/212 (46.70%), Postives = 138/212 (65.09%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVET-RVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            F    + +AT+ FS  N L +GGF +V++G  P+GQ VAVK+    S QGD EF +EV +L+  QH+N+V L+GFC E    +LVYE++ N SLD  ++  D R  L W  R +I  G ARGL YLHE+ ++  I+HRD++ +NIL+  +  P V DFG AR     +   ET R+ GT GY+APEY   GQI+ K+DVYS GV+L+E+I+G
Sbjct:  336 FDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLK-IIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISG 546          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 3.256e-47
Identity = 98/211 (46.45%), Postives = 142/211 (67.30%), Query Frame = 3
Query:   81 LELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP-LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETR----VLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            + LATN FS  N L EGGF +V++GVL  G+ +AVK+  + S QGD EF +EV +++  QHRN+V L+GFC++   R+L+YE+  N SLD +++  +R   L+W  R +I  G ARGL YLHE+ R   IVHRDM+ +N+L+     P + DFG+A+   D D   +TR    V GT+GY+APEYA SG+ + K DV+S GV+++E+I G+
Sbjct:  337 IRLATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFK-IVHRDMKASNVLLDDAMNPKIADFGMAKLF-DTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGK 545          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.554e-47
Identity = 100/214 (46.73%), Postives = 135/214 (63.08%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGD-MGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R FT AE+  AT  F +   +  GGF  V+RG L DG ++A+K+    S QG  EF +E+ +LS  +HR++V LIGFC E    +LVYEY+ NG+L SHL+G +  PL W  R +  +G+ARGL YLH     G I+HRD++  NIL+  +F   + DFGL++  P  D   V T V G+FGYL PEY +  Q+TEK+DVYS GVVL E +  R
Sbjct:  506 RKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERG-IIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCAR 718          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.554e-47
Identity = 103/221 (46.61%), Postives = 140/221 (63.35%), Query Frame = 3
Query:   45 FGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD--PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVL-GTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F  P R  T+A+L  ATN F   + +  GGF  V++  L DG VVA+K+    S QGD+EF +E+E +   +HRN+V L+G+C     RLLVYEY+  GSL+  L+ R +    L W ARRKIA+GAARGL +LH  C +  I+HRDM+ +N+L+  + E  V DFG+AR     D  +    L GT GY+ PEY QS + + K DVYS GVVL+EL+TG+
Sbjct:  869 FEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIKLNWPARRKIAIGAARGLAFLHHNC-IPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGK 1088          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.253e-47
Identity = 103/223 (46.19%), Postives = 145/223 (65.02%), Query Frame = 3
Query:   45 FGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP---LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP--DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F  P R  T+A L  ATN FS  + +  GGF  V++  L DG VVA+K+    + QGD+EF +E+E +   +HRN+V L+G+C     RLLVYEY+  GSL++ L+ + +     L+WSAR+KIA+GAARGL +LH  C +  I+HRDM+ +N+L+  DF   V DFG+AR     D  + V T + GT GY+ PEY QS + T K DVYS GV+L+EL++G+
Sbjct:  839 FEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSC-IPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVST-LAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGK 1059          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TMK1_ARATH1.119e-4746.45Probable receptor protein kinase TMK1 OS=Arabidops... [more]
CRK4_ARATH1.461e-4744.60Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK28_ARATH1.461e-4745.07Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK15_ARATH1.461e-4746.45Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
SERK4_ARATH1.909e-4748.13Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRK40_ARATH2.493e-4746.70Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK41_ARATH3.256e-4746.45Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
Y1357_ARATH5.554e-4746.73Probable receptor-like protein kinase At1g30570 OS... [more]
BRI1_SOLPE5.554e-4746.61Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRL3_ARATH7.253e-4746.19Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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