FC920841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: NTRK2_MOUSE (BDNF/NT-3 growth factors receptor OS=Mus musculus GN=Ntrk2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 74/247 (29.96%), Postives = 107/247 (43.32%), Query Frame = 3 Query: 33 KAPVFGNPPRWFTYAELELATNRFSE---------ANFLAEGGFVSVHRGVL------PDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-----------PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGD-MGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692 K PV NP ++F +L + F + L EG F V D +VAVK K AS ++F E E+L+ QH ++V G CVE ++V+EY+ +G L+ L D L S IA A G+ YL + VHRD+ N LV + +GDFG++R D V + ++ PE + T ++DV+SLGVVL E+ T Sbjct: 506 KIPVIENP-QYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ----HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 747
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: NTRK2_HUMAN (BDNF/NT-3 growth factors receptor OS=Homo sapiens GN=NTRK2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 74/247 (29.96%), Postives = 107/247 (43.32%), Query Frame = 3 Query: 33 KAPVFGNPPRWFTYAELELATNRFSE---------ANFLAEGGFVSVHRGVL------PDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-----------PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGD-MGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692 K PV NP ++F +L + F + L EG F V D +VAVK K AS ++F E E+L+ QH ++V G CVE ++V+EY+ +G L+ L D L S IA A G+ YL + VHRD+ N LV + +GDFG++R D V + ++ PE + T ++DV+SLGVVL E+ T Sbjct: 507 KIPVIENP-QYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ----HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 748
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: NTRK2_CHICK (BDNF/NT-3 growth factors receptor OS=Gallus gallus GN=NTRK2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 74/247 (29.96%), Postives = 107/247 (43.32%), Query Frame = 3 Query: 33 KAPVFGNPPRWFTYAELELATNRFSE---------ANFLAEGGFVSVHRGVL------PDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-----------PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGD-MGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692 K PV NP ++F +L + F + L EG F V D +VAVK K AS ++F E E+L+ QH ++V G CVE ++V+EY+ +G L+ L D L S IA A G+ YL + VHRD+ N LV + +GDFG++R D V + ++ PE + T ++DV+SLGVVL E+ T Sbjct: 503 KIPVIENP-QYFGITNSQLKPDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ----HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 744
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: NTRK1_CHICK (High affinity nerve growth factor receptor (Fragment) OS=Gallus gallus GN=NTRK1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 72/246 (29.27%), Postives = 107/246 (43.50%), Query Frame = 3 Query: 3 PPPLCSTCQHKAPVFGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQ--VVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHL-------------YGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGD-MGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692 P C+ C H +W EL F + FLAE + LP+ + +VAVK K + +F E E+L+ QH ++V G C E ++V+EY+ +G L+ L G+ L S +IA A G+ YL VHRD+ N LV HD +GDFG++R D V R + ++ PE + T ++D++S GVVL E+ T Sbjct: 477 PQYFCNACVHHVQRRDIVLKW------ELGEGAFGKV-FLAECSHL------LPEQEKTLVAVKALKEVTENARLDFQREAELLTVLQHEHIVKFYGVCTEGDPLIMVFEYMKHGDLNRFLRSHGPDAKILDQGQGQPCGQLTLSHMLQIATQIASGMVYLASL----HFVHRDLATRNCLVGHDLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFT 705
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: LRRK2_HUMAN (Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens GN=LRRK2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 65/197 (32.99%), Postives = 109/197 (55.33%), Query Frame = 3 Query: 120 LAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFE-----PLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQI-TEKADVYSLGVVLVELIT 692 L +G F SV+R +G+ VAVK + +S + E+ VL H +++ L+ + R+LV E GSLD L +D+ L + + +IA+ A GLRYLH I++RD++P+N+L+ + + D+G+A++ MG++T GT G+ APE A+ I ++ADVYS G++L +++T Sbjct: 1885 LGDGSFGSVYRAAY-EGEEVAVKIFNKHTSL--RLLRQELVVLCHLHHPSLISLLAAGIRP--RMLVMELASKGSLD-RLLQQDKASLTRTLQHRIALHVADGLRYLHS----AMIIYRDLKPHNVLLFTLYPNAAIIAKIADYGIAQY--CCRMGIKTSE-GTPGFRAPEVARGNVIYNQQADVYSFGLLLYDILT 2068
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: LCK_AOTNA (Proto-oncogene tyrosine-protein kinase LCK OS=Aotus nancymaae GN=LCK PE=2 SV=4) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 68/227 (29.96%), Postives = 98/227 (43.17%), Query Frame = 3 Query: 12 LCSTCQHKAPVFGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692 L CQ + P P W E+ T + E L G F V G D VAVK K S D F +E ++ QH+ +V L ++ ++ EY+ NGSL L L + +A A G+ ++ E +HRD+R NILV+ + DFGLAR D + + APE G T K+DV+S G++L E++T Sbjct: 220 LSRPCQTQKP---QKPWWEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNDHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 435
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: ITK_MOUSE (Tyrosine-protein kinase ITK/TSK OS=Mus musculus GN=Itk PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.561e-15 Identity = 60/228 (26.32%), Postives = 102/228 (44.74%), Query Frame = 3 Query: 9 PLCSTCQHKAPVFGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692 P+CS Q KAPV Y + + + + + G F VH G + VA+K + + +++F E EV+ H +V L G C+E LV+E++ +G L +L + R + + G+ YL + C++HRD+ N LV + V DFG+ R+ D T + +PE + + K+DV+S GV++ E+ + Sbjct: 342 PVCSWRQ-KAPVTAG----LRYGKWVIQPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIQ-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRSQ-RGLFAAETLLGMCLDVCEGMAYLEK----ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 558
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y4251_DICDI (Probable serine/threonine-protein kinase DDB_G0284251 OS=Dictyostelium discoideum GN=DDB_G0284251 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14 Identity = 60/197 (30.46%), Postives = 100/197 (50.76%), Query Frame = 3 Query: 120 LAEGGFVSVHRGVL-PDGQVVAVKQYKLASSQGD----QEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695 + G F V +G+ G+ VA+KQ + S++ D Q EVE+L +H N+V ++G + + EY+ NGSL + PL +GL YLH ++HRD++ +NIL+T + + DFG+A Q D + + V+GT ++APE + + +D++SLG ++EL+TG Sbjct: 42 IGRGAFGQVFKGLNGKTGEFVAIKQ--IDSNKIDESSLQSVKGEVEILHKLRHNNIVKVLGVVEVQAQLNFILEYVENGSLRDVI--EKFGPLSEELCIIYLYQMLQGLAYLHSNK----VIHRDIKASNILITKEGVIKLADFGVAS-QIDSESQLRFSVVGTPYWMAPESIEISGCSSASDIWSLGSTMIELLTG 229
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PKN2_CLOAB (Probable serine/threonine-protein kinase CA_C1728 OS=Clostridium acetobutylicum GN=CA_C1728 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14 Identity = 56/206 (27.18%), Postives = 103/206 (50.00%), Query Frame = 3 Query: 93 TNRFSEANFLAEGGFVSVHRGV-LPDGQVVAVKQYKLASSQGDQ---EFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698 +NR+ + GG V++ + + VAVK K ++ ++ +F E + + N+V + + +V EY+ +L + ++ +E++ A A+ L + H+ IVHRD++P+NI+VT D V DFG+A+ + + +V+G+ YL+PE AQ + + D+YS G+VL E+ TG+ Sbjct: 7 SNRYKIEEEIGVGGTAVVYKAMDTLLNRHVAVKVLKHEFTEDEEFVFKFKREASAAARIANANIVNIYDVGADGNVNYIVMEYVAGKTLKKLI--KENGKIEFNKIIDYATQIAKALNFAHKNG----IVHRDIKPHNIMVTDDDIIKVTDFGIAKASNESTITTTNKVVGSAHYLSPEQAQGIPVDCRTDIYSFGIVLYEMATGK 206
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PKNL_MYCTU (Probable serine/threonine-protein kinase pknL OS=Mycobacterium tuberculosis GN=pknL PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.631e-14 Identity = 68/212 (32.08%), Postives = 109/212 (51.42%), Query Frame = 3 Query: 78 ELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQ--GDQEFCSE--VEVLSCAQHRNVVMLIGFCV-EDGRR-LLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695 E L +R+ +A GG +V+RG+ D ++ K+ S+ GD++F + +E + A+ N ++ + +DGR LV E I G+L L +R P+ A + GL H R G +VHRD++P NIL++ D + + DFGL R + +LGT YL+PE + G ++DVYS+GV++ EL+TG Sbjct: 11 ESALLDSRYLVQAKIASGGTSTVYRGL--DVRLDRPVALKVMDSRYAGDEQFLTRFRLEARAVARLNNRALVAVYDQGKDGRHPFLVMELIEGGTLRELLI--ERGPMPPHAVVAVLRPVLGGLAAAH---RAG-LVHRDVKPENILISDDGDVKLADFGLVRAVAAASITSTGVILGTAAYLSPEQVRDGNADPRSDVYSVGVLVYELLTG 214 The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bpback to top |