FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14954 contig Ccv1_Contig14954:702..1399. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.473e-47
Identity = 103/221 (46.61%), Postives = 140/221 (63.35%), Query Frame = 3
Query:   45 FGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR--DPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVL-GTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F  P R  T+A+L  ATN F   + +  GGF  V++  L DG VVA+K+    S QGD+EF +E+E +   +HRN+V L+G+C     RLLVYEY+  GSL+  L+ R +    L W ARRKIA+GAARGL +LH  C +  I+HRDM+ +N+L+  + E  V DFG+AR     D  +    L GT GY+ PEY QS + + K DVYS GVVL+EL+TG+
Sbjct:  869 FEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKIGIKLNWPARRKIAIGAARGLAFLHHNC-IPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGK 1088          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.237e-46
Identity = 100/226 (44.25%), Postives = 147/226 (65.04%), Query Frame = 3
Query:   33 KAPVFGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVE-----TRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            K P+     + + + EL+ AT+ FS+ + +  GG+  V++G LP G VVAVK+ +  S QG +EF +E+E+LS   HRN+V L+G+C + G ++LVYEY+ NGSL   L  R R PL  + R +IA+G+ARG+ YLH E     I+HRD++P+NIL+     P V DFG+++       GV+     T V GT GY+ PEY  S ++TEK+DVYSLG+V +E++TG
Sbjct:  608 KPPMNMESVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPP-IIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTG 832          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.616e-46
Identity = 98/229 (42.79%), Postives = 141/229 (61.57%), Query Frame = 3
Query:   21 TCQHKAPVFGNP---PRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            T  HK+ ++ +     R+F+ +EL+  T  F  +  +  GGF +V+ G + DG  VA+K+    S QG  EF +E+++LS  +HR++V LIG+C E+   +LVYEY+ NG    HLYG++  PL W  R +I +GAARGL YLH     G I+HRD++  NIL+       V DFGL++    G   V T V G+FGYL PEY +  Q+T+K+DVYS GVVL+E +  R
Sbjct:  495 TGSHKSNLYNSALGLGRYFSLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYGKNLSPLTWKQRLEICIGAARGLHYLHTGTAQG-IIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCAR 722          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.616e-46
Identity = 94/211 (44.55%), Postives = 145/211 (68.72%), Query Frame = 3
Query:   72 YAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            Y  ++ AT+ F E+N + +GGF  V++G L DG  VAVK+   +S QG+ EF +EV +++  QHRN+V L+GFC++   R+LVYEY+ N SLD  L+    +  L+W+ R KI  G ARG+ YLH++ R+  I+HRD++ +NIL+  D  P + DFG+AR +  D      +R++GT+GY++PEYA  GQ + K+DVYS GV+++E+I+G+
Sbjct:  327 YRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRL-TIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGK 536          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.110e-46
Identity = 96/213 (45.07%), Postives = 138/213 (64.79%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F +  +E ATN F ++N L  GGF  V +G  P+G  VAVK+    S QG++EF +EV +++  QHRN+V L+GF VE   ++LVYEY+ N SLD  L+  R R  L+W  R  I  G  RG+ YLH++ R+  I+HRD++  NIL+  D  P + DFG+AR ++ D       RV+GTFGY+ PEY  +GQ + K+DVYS GV+++E+I G+
Sbjct:  323 FDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRL-TIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGK 534          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.110e-46
Identity = 103/224 (45.98%), Postives = 143/224 (63.84%), Query Frame = 3
Query:   45 FGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP----LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP--DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F  P R  T+A L  ATN FS    +  GGF  V++  L DG VVA+K+    + QGD+EF +E+E +   +HRN+V L+G+C     RLLVYEY+  GSL++ L+ +        L W+AR+KIA+GAARGL +LH  C +  I+HRDM+ +N+L+  DFE  V DFG+AR     D  + V T + GT GY+ PEY QS + T K DVYS GV+L+EL++G+
Sbjct:  840 FEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSC-IPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVST-LAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGK 1061          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.110e-46
Identity = 100/224 (44.64%), Postives = 143/224 (63.84%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPD----------GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR--DPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMG-VETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FT+AEL+ AT  F   + L EGGF SV +G + +          G V+AVK+      QG QE+ +EV  L    H N+V LIG+C+ED  RLLVYE++  GSL++HL+ R     PL W+ R K+A+GAA+GL +LH       +++RD + +NIL+  ++   + DFGLA+  P GD   V TR++GT+GY APEY  +G +T K+DVYS GVVL+E+++GR
Sbjct:   57 FTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHN--AETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGR 278          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.756e-46
Identity = 100/222 (45.05%), Postives = 140/222 (63.06%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLP----------DGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGD-MGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FT+ EL+ AT  F   + L EGGF  V +G +            G VVAVK+ K    QG +E+ +EV  L    H N+V L+G+CVE   RLLVYE++  GSL++HL+ R   PL W+ R K+A+GAA+GL +LH+      +++RD +  NIL+  +F   + DFGLA+  P GD   V T+V+GT GY APEY  +G++T K+DVYS GVVL+EL++GR
Sbjct:   71 FTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFLHD--AKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGR 290          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.600e-46
Identity = 90/209 (43.06%), Postives = 132/209 (63.16%), Query Frame = 3
Query:   72 YAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            + ++  ATN F E   + +GGF  V++ +LPDG   A+K+ K  S QG  EF +E++VLS  +HR++V L G+C E+   +LVYE++  G+L  HLYG +   L W  R +I +GAARGL YLH     G I+HRD++  NIL+       V DFGL++     +  +   + GTFGYL PEY Q+ ++TEK+DVY+ GVVL+E++  R
Sbjct:  478 FTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFAR 686          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.600e-46
Identity = 92/213 (43.19%), Postives = 141/213 (66.20%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F +  +E+AT+ FS  N L +GGF  V++G+LP+   +AVK+    S QG QEF +EV +++  QH+N+V L+GFC+E   ++LVYE++ N SLD  L+  + +  L+W  R  I  G  RGL YLH++ R+  I+HRD++ +NIL+  D  P + DFG+AR ++ D       RV+GTFGY+ PEY   GQ + K+DVYS GV+++E++ G+
Sbjct:  327 FDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFDPKMKSQLDWKRRYNIIGGVTRGLLYLHQDSRL-TIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGK 538          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BRI1_SOLLC9.473e-4746.61Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
Y5374_ARATH1.237e-4644.25Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH1.616e-4642.79Probable receptor-like protein kinase At2g21480 OS... [more]
CRK10_ARATH1.616e-4644.55Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
CRK16_ARATH2.110e-4645.07Putative cysteine-rich receptor-like protein kinas... [more]
BRL1_ARATH2.110e-4645.98Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
APK1B_ARATH2.110e-4644.64Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
APK2B_ARATH2.756e-4645.05Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y2232_ARATH3.600e-4643.06Probable receptor-like protein kinase At2g23200 OS... [more]
CRK31_ARATH3.600e-4643.19Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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