FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: LCK_SAISC (Proto-oncogene tyrosine-protein kinase LCK OS=Saimiri sciureus GN=LCK PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 67/227 (29.52%), Postives = 97/227 (42.73%), Query Frame = 3
Query:   12 LCSTCQHKAPVFGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692
            L   CQ + P     P W    E+   T +  E   L  G F  V  G   +   VAVK  K  S   D  F +E  ++   QH+ +V L     E+   ++  EY+ NGSL   L       L  +    +A     G+ +L E       +HRD+R  NILV+      + DFGLAR   D +            + APE    G  T K+DV+S G+++ E++T
Sbjct:  220 LSRPCQTQKP---QKPWWEDEWEVPRETLKLVER--LGAGQFGEVWMGYYNEHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHKRLVRLYAVVTEEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIVEGMAFLEERN----YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILMTEIVT 435          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: ITK_HUMAN (Tyrosine-protein kinase ITK/TSK OS=Homo sapiens GN=ITK PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 60/228 (26.32%), Postives = 101/228 (44.30%), Query Frame = 3
Query:    9 PLCSTCQHKAPVFGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692
            P+C   Q KAPV         Y +  +  +  +    +  G F  VH G   +   VA+K  +   +  +++F  E EV+    H  +V L G C+E     LV+E++ +G L  +L  + R          + +    G+ YL E     C++HRD+   N LV  +    V DFG+ R+  D      T       + +PE     + + K+DV+S GV++ E+ +
Sbjct:  337 PVCFGRQ-KAPVTAG----LRYGKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE----ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 553          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: FER_CANFA (Proto-oncogene tyrosine-protein kinase Fer OS=Canis familiaris GN=FER PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 57/189 (30.16%), Postives = 92/189 (48.68%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQ-EFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVE 683
            L +G F  V++G+L D   VAVK  K    Q  + +F  E ++L    H N+V LIG C +     ++ E +  G   S L  + +D ++     K ++ AA G+ YL  +    CI HRD+   N LV  +    + DFG++R +  G             + APE    G+ + ++DV+S G++L E
Sbjct:  569 LGKGNFGEVYKGILKDKTAVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPIYIIMELVPGGDFLSFL-RKKKDEIKLKQLVKFSLDAASGMSYLESK---NCI-HRDLAARNCLVGENNVLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWE 752          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: RAF1_RAT (RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus GN=Raf1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 63/200 (31.50%), Postives = 102/200 (51.00%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGS-LDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLA----RWQPDGDMGVETRVLGTFGYLAPEYAQ---SGQITEKADVYSLGVVLVELITG 695
            +  G F +V++G       V + +    + +  Q F +EV VL   +H N+++ +G+  +D   L +    C GS L  HL+ ++    +      IA   A+G+ YLH +     I+HRDM+ NNI +       +GDFGLA    RW   G   VE +  G+  ++APE  +   +   + ++DVYS G+VL EL+TG
Sbjct:  355 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTKDN--LAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKN----IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW--SGSQQVE-QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 544          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PKSC_STRCO (Serine/threonine-protein kinase pksC OS=Streptomyces coelicolor GN=pksC PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 68/221 (30.77%), Postives = 103/221 (46.61%), Query Frame = 3
Query:   72 YAELELATNRFSEANFLAEGGFVSVHRG---VLPDGQVVAVKQYKLASSQGDQE-FCSEVEVLSCAQHRNVVMLIGFCVEDGRRL----LVYEYICNGSLDSHLYG--RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDG--DMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            YA   LA  R+   + L EGG  SVH     VL     +     +L   Q  +E F  E + ++   H N+V +     +D   +    +V EY+    L S L    R +  +      KI       L   HE   +G +VHRD++P N+++T      V DFG+AR    G   M     V+GT  YL+PE A    +  ++D+YS+G++L +L+TGR
Sbjct:   10 YAGRALAGGRYQLRDLLGEGGMASVHLAYDSVLDRQVAIKTLHTELGREQAFRERFRREAQAVAKLTHTNIVSVFDTGEDDLDGMTTPYIVMEYVEGRPLGSVLDEDVRQQGAMPADKALKITADVLAALEISHE---MG-LVHRDIKPGNVMMTKRGVVKVMDFGIARAMQSGVTSMTQTGMVVGTPQYLSPEQALGRGVDARSDLYSVGIMLFQLVTGR 226          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PKNK_MYCBO (Probable serine/threonine-protein kinase pknK OS=Mycobacterium bovis GN=pknK PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 72/210 (34.29%), Postives = 98/210 (46.67%), Query Frame = 3
Query:   84 ELATNRFSEANFLAEGGFVSVHRGVLPD-GQVVAVKQYKLASSQGDQE-FCSEVEV---LSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVL-GTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            EL    F     +  GGF  V+R V P   + VAVK       + + E F  E      LS   H   V+ +G  +  GR  +V  Y    SL++ +  R   PL+W     I V  A  L   H   RVG + HRD++P NIL+T   EP + DFG+AR    G     T V+ G+  + APE  +    T  +DVYSLG  L  ++TG
Sbjct:   20 ELLEAGFDNVEEIGRGGFGVVYRCVQPSLDRAVAVKVLSTDLDRDNLERFLREQRAMGRLSGHPHIVTVLQVGV-LAGGRPFIVMPYHAKNSLETLI--RRHGPLDWRETLSIGVKLAGALEAAH---RVGTL-HRDVKPGNILLTDYGEPQLTDFGIARIA--GGFETATGVIAGSPAFTAPEVLEGASPTPASDVYSLGATLFCVLTG 220          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: IPL1_YARLI (Spindle assembly checkpoint kinase OS=Yarrowia lipolytica GN=IPL1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14
Identity = 51/171 (29.82%), Postives = 83/171 (48.54%), Query Frame = 3
Query:  183 VKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            +++ +L     +++F  EVE+ S  +H NV+ L G   +  R  L+ EY+ +G L   L  R++     S         +  L YLH +     I+HRD++P NIL+  +    + DFG   W         + + GT  YL PE  QS    +  DV+SLG+++ E + G
Sbjct:  130 MEKKELVEGNVEKQFRREVEIQSNLRHTNVLRLFGHFHDKDRVYLILEYVVHGELYKLL--RNQKRFTESTASSYIYQMSEALLYLHGKN----IIHRDIKPENILLHFNDTIKISDFG---WSVHAPSNRRSTLCGTMDYLPPEIVQSRPYDKNVDVWSLGILMYEFLCG 291          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: STK_HYDAT (Tyrosine-protein kinase STK OS=Hydra attenuata GN=STK PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14
Identity = 57/191 (29.84%), Postives = 88/191 (46.07%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692
            L  G F  V  GV  +   VAVK  K   +     F  E  V+   +H+++V L   C +     +V EY+  GSL  +L   +   L+      +A   A G+ +L  +      +HRD+   NILV  ++   V DFGLAR   D +            + APE A   + T K+DV+S G+++ E++T
Sbjct:  246 LGAGQFGEVWAGVWNNTTQVAVKTLK-PGTMSPASFLDEAGVMKKLRHKHLVQLYAICSDREPIYIVTEYMSGGSLLDYLSKGEGVNLQLPTLIDMAAQVASGMAFLEAQG----YIHRDLAARNILVGENYICKVADFGLARLIEDDEYTAHEGAKFPIKWTAPEAALYNRFTIKSDVWSFGILMAEIVT 431          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: ROR1_DROME (Tyrosine-protein kinase transmembrane receptor Ror OS=Drosophila melanogaster GN=Ror PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14
Identity = 62/201 (30.85%), Postives = 100/201 (49.75%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPDGQ----VVAVKQYKL-ASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLY------GRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGD-MGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVEL 686
            L EG F  V++G L         VA+K  K  AS +  Q+F  E+E++S  +H+N+V ++G  +      +++EY+ NG L   L       G+    LE+    +IA+  + G++YL         VHRD+   N LV       + DFGL+R     D   V+++ L    ++  E    G+ T ++DV+S GVVL E+
Sbjct:  416 LGEGAFGKVYKGQLLQPNKTTITVAIKALKENASVKTQQDFKREIELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSPTEGKSLSQLEF---LQIALQISEGMQYLSAH----HYVHRDLAARNCLVNEGLVVKISDFGLSRDIYSSDYYRVQSKSLLPVRWMPSESILYGKFTTESDVWSFGVVLWEI 609          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PHO85_YEAST (Cyclin-dependent protein kinase PHO85 OS=Saccharomyces cerevisiae GN=PHO85 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.745e-14
Identity = 59/213 (27.70%), Postives = 102/213 (47.89%), Query Frame = 3
Query:   90 ATNRFSEANFLAEGGFVSVHRGV-LPDGQVVAVKQYKLASSQGDQEFC-SEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGS---LDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLG----TFGYLAPEYAQ-SGQITEKADVYSLGVVLVELITGR 698
            ++++F +   L  G + +V++G+    G  VA+K+ KL S +G       E+ ++   +H N+V L      + +  LV+E++ N     +DS   G     LE +  +       +GL + HE      I+HRD++P N+L+    +  +GDFGLAR       G+          T  Y AP+    S   +   D++S G +L E+ITG+
Sbjct:    3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK----ILHRDLKPQNLLINKRGQLKLGDFGLAR-----AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LCK_SAISC2.782e-1429.52Proto-oncogene tyrosine-protein kinase LCK OS=Saim... [more]
ITK_HUMAN2.782e-1426.32Tyrosine-protein kinase ITK/TSK OS=Homo sapiens GN... [more]
FER_CANFA2.782e-1430.16Proto-oncogene tyrosine-protein kinase Fer OS=Cani... [more]
RAF1_RAT3.633e-1431.50RAF proto-oncogene serine/threonine-protein kinase... [more]
PKSC_STRCO3.633e-1430.77Serine/threonine-protein kinase pksC OS=Streptomyc... [more]
PKNK_MYCBO3.633e-1434.29Probable serine/threonine-protein kinase pknK OS=M... [more]
IPL1_YARLI3.633e-1429.82Spindle assembly checkpoint kinase OS=Yarrowia lip... [more]
STK_HYDAT4.745e-1429.84Tyrosine-protein kinase STK OS=Hydra attenuata GN=... [more]
ROR1_DROME4.745e-1430.85Tyrosine-protein kinase transmembrane receptor Ror... [more]
PHO85_YEAST4.745e-1427.70Cyclin-dependent protein kinase PHO85 OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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