FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: BRAF1_CHICK (B-Raf proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=BRAF PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 59/212 (27.83%), Postives = 99/212 (46.70%), Query Frame = 3
Query:   84 ELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLA----RWQPDGDMGVETRVLGTFGYLAPEYAQ---SGQITEKADVYSLGVVLVELITGR 698
            E+   + +    +  G F +V++G       V +      + Q  Q F +EV VL   +H N+++ +G+  +   +L +    C GS   H         E      IA   A+G+ YLH +     I+HRD++ NNI +  D    +GDFGLA    RW          ++ G+  ++APE  +       + ++DVY+ G+VL EL+TG+
Sbjct:  491 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS----IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF---EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 693          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: ABL1_CAEEL (Tyrosine-protein kinase abl-1 OS=Caenorhabditis elegans GN=abl-1 PE=1 SV=4)

HSP 1 Score: 77.7962 bits (190), Expect = 6.197e-14
Identity = 57/206 (27.67%), Postives = 92/206 (44.66%), Query Frame = 3
Query:   78 ELELATNRFSEANFLAEGGFVSVHRGVLPDGQ-VVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692
            E EL  +     N L  G +  V+ G        +AVK  K   +    EF +E  ++    H+N+V L+G C  +    ++ E++CNG+L  +L   D+  L      ++A   A G+ YL         +HRD+   N LV+      + DFGLAR+  +              + APE       + K+DV++ GV+L E+ T
Sbjct:  303 EWELDRSEIIMHNKLGGGQYGDVYEGYWKRHDCTIAVKALK-EDAMPLHEFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEAR----HFIHRDLAARNCLVSEHNIVKIADFGLARFMKEDTYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIAT 503          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y0133_DICDI (Probable serine/threonine-protein kinase DDB_G0278665 OS=Dictyostelium discoideum GN=DDB_G0278665 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 67/215 (31.16%), Postives = 102/215 (47.44%), Query Frame = 3
Query:   72 YAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEV-LSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTH-----DFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            Y ELE+        N +  GG+ ++++     G  VAVK   ++      EF  E+E+      H N+V  +GFCV    + LV EYI  GSLD +L+  +        R K+A   A+G+ +LH       I+H D++P N LV            + DFGLA        G    V G+F Y++PE     + +  ADV+S G  L+E++T +
Sbjct:  189 YKELEIG-------NVIGGGGYGAIYKAKWR-GLSVAVKV--ISELSDGSEFEKELEMHKELLHHPNIVHFVGFCVSP--KCLVLEYIEGGSLDKYLHNPNYT-FSPQLRLKMANDIAKGMCFLHRNE----ILHLDLKPQNFLVVSISPEAPVSIKLADFGLATSSSRSFYG--PTVEGSFLYMSPEVFTQKKFSRAADVWSYGACLIEILTNK 384          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: SRC_RSVP (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain Prague C) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 61/191 (31.94%), Postives = 86/191 (45.03%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692
            L +G F  V  G   D   VA+K  K   +   + F  E +V+   +H  +V L     E+   +++ EY+  GSL   L G     L       +A   A G+ Y+         VHRD+R  NILV  +    V DFGLAR   D +            + APE A  G+ T K+DV+S G++L EL T
Sbjct:  273 LGQGCFGEVWMGTWNDTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 457          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: RIPK2_MOUSE (Receptor-interacting serine/threonine-protein kinase 2 OS=Mus musculus GN=Ripk2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 61/220 (27.73%), Postives = 107/220 (48.64%), Query Frame = 3
Query:   96 NRFSEANFLAEGGFVSVHRGVLPDGQV-VAVKQYKLASSQGDQE---FCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP-LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQ-------------PDGDMGVETRVLGTFGYLAPEYAQSGQ---ITEKADVYSLGVVLVELIT 692
            ++ ++ ++L+ G   +V      D +V VAVK   + +   D E      E E+L  A+   ++ ++G C E     +V EY+ NGSL+  L+ +   P + W  R +I    A G+ YLH       ++H D++  NIL+ ++F   + DFGL++W+             P+G         GT  Y+ PE  + GQ    + K D+YS  V++ E+++
Sbjct:   16 HKLADLHYLSRGASGTVSSARHADWRVRVAVKHLHIHTPLLDSERNDILREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKTEYPDIAWPLRFRILHEIALGVNYLHNMNPP--LLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSYKSAPEG---------GTIIYMPPENYEPGQKSRASVKHDIYSYAVIMWEVLS 224          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PKAA_STRCO (Serine/threonine-protein kinase pkaA OS=Streptomyces coelicolor GN=pkaA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 60/183 (32.79%), Postives = 85/183 (46.45%), Query Frame = 3
Query:  168 GQVVAVKQYKLA-SSQGD--QEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTH---DFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            G+ VA+K  K   +S  D    F  E  VL    H N+V +    VE     LV + I     D H Y R+  PL   A   +    A  L   H +     +VHRD++P N+L+     +  P++ DFG+AR      +      +GT  Y+APE A+    T   DVY  G++L EL+TGR
Sbjct:   42 GETVAIKVLKEELASDADIVMRFLRERSVLLRLTHPNIVRVRDLVVEGELLALVMDLI--DGPDLHRYLRENGPLTPVAAALLTAQIADALAASHADG----VVHRDLKPANVLLKQTGGEMHPMLTDFGIARLADSPGLTRTHEFVGTPAYVAPESAEGRPQTSAVDVYGAGILLYELVTGR 218          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: FGFR3_CHICK (Fibroblast growth factor receptor 3 OS=Gallus gallus GN=FGFR3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 70/242 (28.93%), Postives = 111/242 (45.87%), Query Frame = 3
Query:   57 PRWFTYAELELATNRFSEANFLAEGGF--------VSVHRGVLPDGQVVAVKQYKLASSQGD-QEFCSEVEVLSC-AQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARR--------------KIAVGAARGLRYL-HEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFG-----YLAPEYAQSGQITEKADVYSLGVVLVELIT 692
            P+W      ELA +R +    L EG F        + + +        VAVK  K  ++  D  +  SE+E++    +H+N++ L+G C +DG   ++ EY   G+L  +L  R    +++S                   A   ARG+ YL  ++C     +HRD+   N+LVT D    + DFGLAR   + D   +T    T G     ++APE       T ++DV+S GV+L E+ T
Sbjct:  457 PKW------ELARSRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKAITVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKC-----IHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKT----TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 683          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: VAB1_CAEEL (Ephrin receptor 1 OS=Caenorhabditis elegans GN=vab-1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 55/181 (30.39%), Postives = 86/181 (47.51%), Query Frame = 3
Query:  171 QVVAVKQYKLASS-QGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR--DPLEWSARRKIAVGAARGLRYLHEECRVGCIVH-RDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFG-----YLAPEYAQSGQITEKADVYSLGVVLVEL 686
            + VA+K  K  SS +   EF +E  ++    H NV+ LIG        ++V EY+ NGSLD  L   D+  + + W    ++  G A G++YL +   V  +   RD+   N+L+  +    + DFGL+R        VE       G     + APE     + T  +DV+S GVV+ E+
Sbjct:  743 ETVAIKTLKSGSSAKAKAEFLTEATIMGQFSHPNVIRLIGVVTSAEPVMIVAEYMANGSLDQFLRNTDQRGEKVHWEKITEMLYGIASGMKYLTDMGYVHRVSFLRDLAARNVLLDMELRCKIADFGLSRGVRSEGSSVEPEYTTNGGKIPVRWTAPEAITHRKFTPSSDVWSFGVVIWEV 923          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: STK4L_DICDI (Serine/threonine-protein kinase 4 homolog B OS=Dictyostelium discoideum GN=krsB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 57/194 (29.38%), Postives = 94/194 (48.45%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPD-GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETR----VLGTFGYLAPEYAQSGQITEKADVYSLGVVLVEL 686
            L  G F SV++      G +VAVK   +  ++  QE   E+ ++   + + VV   G   +D    ++ EY   GS+   +   +R  L       +     +GL YLH   ++    HRD++P NILV+ + E  + DFG++     G +   TR    V+GT  +LAPE  Q      KAD+++LG+  +E+
Sbjct:   29 LGRGSFGSVYKATYKKTGNIVAVKLVPI--NEDFQEILKEINIMKQCKSKYVVQYYGNYFKDETCWIIMEYCAFGSVSDMMNITNR-VLNEEQIALVCYSTLKGLYYLHRNSKI----HRDIKPGNILVSEEGECKLADFGVS-----GQLSERTRKRNTVIGTPFFLAPEVIQEVGYDNKADIWALGISAIEM 210          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PATS1_DICDI (Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum GN=pats1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 68/211 (32.23%), Postives = 107/211 (50.71%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPDGQVVAVKQYK-------------LASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFE-----PLVGDFGLARWQPD-GDMGVETRVLGTFGYLAPEYA-QSGQITEKADVYSLGVVLVELIT 692
            + EGG   V+R     GQ VAVK+ K             ++ S+   EF  E  V+S  +H N+V L G C++     +V EY+ +G+L S L+  + +   W  R K+A+  + G+ +LH       I+HRD++  NIL+    E       V DFGL+  Q    + GVE  +     +LAPE   ++ + + + DVY+ GV+L EL+T
Sbjct: 2253 IGEGGAALVYRARW-QGQTVAVKKLKTIENLDSPIEINDISLSKAFNEFRRECWVMSELEHPNIVQLKGLCLDP--LCIVTEYLPHGNLYSFLHKPEME-FSWLFRLKVALDISSGMAFLHSS--TPPIIHRDLKSPNILLASINENAQTIAKVVDFGLSGLQHTITNRGVENPL-----WLAPEILNKTKEASTQTDVYAFGVILWELVT 2452          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BRAF1_CHICK6.197e-1427.83B-Raf proto-oncogene serine/threonine-protein kina... [more]
ABL1_CAEEL6.197e-1427.67Tyrosine-protein kinase abl-1 OS=Caenorhabditis el... [more]
Y0133_DICDI8.094e-1431.16Probable serine/threonine-protein kinase DDB_G0278... [more]
SRC_RSVP8.094e-1431.94Tyrosine-protein kinase transforming protein Src O... [more]
RIPK2_MOUSE8.094e-1427.73Receptor-interacting serine/threonine-protein kina... [more]
PKAA_STRCO8.094e-1432.79Serine/threonine-protein kinase pkaA OS=Streptomyc... [more]
FGFR3_CHICK8.094e-1428.93Fibroblast growth factor receptor 3 OS=Gallus gall... [more]
VAB1_CAEEL1.057e-1330.39Ephrin receptor 1 OS=Caenorhabditis elegans GN=vab... [more]
STK4L_DICDI1.057e-1329.38Serine/threonine-protein kinase 4 homolog B OS=Dic... [more]
PATS1_DICDI1.057e-1332.23Probable serine/threonine-protein kinase pats1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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