FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14954 contig Ccv1_Contig14954:702..1399. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CSK_MOUSE (Tyrosine-protein kinase CSK OS=Mus musculus GN=Csk PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13
Identity = 57/178 (32.02%), Postives = 87/178 (48.88%), Query Frame = 3
Query:  168 GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVED-GRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR----WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVEL 686
            G  VAVK  K  ++   Q F +E  V++  +H N+V L+G  VE+ G   +V EY+  GSL  +L  R R  L      K ++     + YL         VHRD+   N+LV+ D    V DFGL +     Q  G + V+        + APE  +  + + K+DV+S G++L E+
Sbjct:  216 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVLEAMEYLEGNN----FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK--------WTAPEALREKKFSTKSDVWSFGILLWEI 379          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CSK_CHICK (Tyrosine-protein kinase CSK OS=Gallus gallus GN=CSK PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13
Identity = 57/178 (32.02%), Postives = 87/178 (48.88%), Query Frame = 3
Query:  168 GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRL-LVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR----WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVEL 686
            G  VAVK  K  ++   Q F +E  V++  +H N+V L+G  VE+   L +V EY+  GSL  +L  R R  L      K ++     + YL         VHRD+   N+LV+ D    V DFGL +     Q  G + V+        + APE  +  + + K+DV+S G++L E+
Sbjct:  216 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKSGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE----ANNFVHRDLAARNVLVSEDNIAKVSDFGLTKEASSTQDTGKLPVK--------WTAPEALREKKFSTKSDVWSFGILLWEI 379          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: STK4_OTOGA (Serine/threonine-protein kinase 4 OS=Otolemur garnettii GN=STK4 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 57/194 (29.38%), Postives = 94/194 (48.45%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPD-GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            L EG + SV++ +  + GQ+VA+KQ  + S    QE   E+ ++      +VV   G   ++    +V EY   GS+   +  R++   E      I     +GL YLH   ++    HRD++  NIL+  +    + DFG+A    D  M     V+GT  ++APE  Q       AD++SLG+  +E+  G+
Sbjct:   36 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE-DEIATILQSTLKGLEYLHFMRKI----HRDIKAGNILLNTEGHAKLADFGVAGQLTD-TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 221          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: STK4_MOUSE (Serine/threonine-protein kinase 4 OS=Mus musculus GN=Stk4 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 57/194 (29.38%), Postives = 94/194 (48.45%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPD-GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            L EG + SV++ +  + GQ+VA+KQ  + S    QE   E+ ++      +VV   G   ++    +V EY   GS+   +  R++   E      I     +GL YLH   ++    HRD++  NIL+  +    + DFG+A    D  M     V+GT  ++APE  Q       AD++SLG+  +E+  G+
Sbjct:   36 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE-DEIATILQSTLKGLEYLHFMRKI----HRDIKAGNILLNTEGHAKLADFGVAGQLTD-TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 221          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: STK4_MACMU (Serine/threonine-protein kinase 4 OS=Macaca mulatta GN=STK4 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 57/194 (29.38%), Postives = 94/194 (48.45%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPD-GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            L EG + SV++ +  + GQ+VA+KQ  + S    QE   E+ ++      +VV   G   ++    +V EY   GS+   +  R++   E      I     +GL YLH   ++    HRD++  NIL+  +    + DFG+A    D  M     V+GT  ++APE  Q       AD++SLG+  +E+  G+
Sbjct:   36 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE-DEIATILQSTLKGLEYLHFMRKI----HRDIKAGNILLNTEGHAKLADFGVAGQLTD-TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 221          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: STK4_LEMCA (Serine/threonine-protein kinase 4 OS=Lemur catta GN=STK4 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 57/194 (29.38%), Postives = 94/194 (48.45%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPD-GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            L EG + SV++ +  + GQ+VA+KQ  + S    QE   E+ ++      +VV   G   ++    +V EY   GS+   +  R++   E      I     +GL YLH   ++    HRD++  NIL+  +    + DFG+A    D  M     V+GT  ++APE  Q       AD++SLG+  +E+  G+
Sbjct:   36 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE-DEIATILQSTLKGLEYLHFMRKI----HRDIKAGNILLNTEGHAKLADFGVAGQLTD-TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 221          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: STK4_HUMAN (Serine/threonine-protein kinase 4 OS=Homo sapiens GN=STK4 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 57/194 (29.38%), Postives = 94/194 (48.45%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPD-GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            L EG + SV++ +  + GQ+VA+KQ  + S    QE   E+ ++      +VV   G   ++    +V EY   GS+   +  R++   E      I     +GL YLH   ++    HRD++  NIL+  +    + DFG+A    D  M     V+GT  ++APE  Q       AD++SLG+  +E+  G+
Sbjct:   36 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE-DEIATILQSTLKGLEYLHFMRKI----HRDIKAGNILLNTEGHAKLADFGVAGQLTD-TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 221          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: STK4_CERAE (Serine/threonine-protein kinase 4 OS=Cercopithecus aethiops GN=STK4 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 57/194 (29.38%), Postives = 94/194 (48.45%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPD-GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            L EG + SV++ +  + GQ+VA+KQ  + S    QE   E+ ++      +VV   G   ++    +V EY   GS+   +  R++   E      I     +GL YLH   ++    HRD++  NIL+  +    + DFG+A    D  M     V+GT  ++APE  Q       AD++SLG+  +E+  G+
Sbjct:   36 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE-DEIATILQSTLKGLEYLHFMRKI----HRDIKAGNILLNTEGHAKLADFGVAGQLTD-TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 221          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: STK4_BOVIN (Serine/threonine-protein kinase 4 OS=Bos taurus GN=STK4 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 57/194 (29.38%), Postives = 94/194 (48.45%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPD-GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            L EG + SV++ +  + GQ+VA+KQ  + S    QE   E+ ++      +VV   G   ++    +V EY   GS+   +  R++   E      I     +GL YLH   ++    HRD++  NIL+  +    + DFG+A    D  M     V+GT  ++APE  Q       AD++SLG+  +E+  G+
Sbjct:   36 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE-DEIATILQSTLKGLEYLHFMRKI----HRDIKAGNILLNTEGHAKLADFGVAGQLTD-TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 221          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: SRC_RSVH1 (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain H-19) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13
Identity = 60/191 (31.41%), Postives = 85/191 (44.50%), Query Frame = 3
Query:  120 LAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELIT 692
            L +G F  V  G       VA+K  K   +   + F  E +V+   +H  +V L     E+   +++ EY+  GSL   L G     L       +A   A G+ Y+         VHRD+R  NILV  +    V DFGLAR   D +            + APE A  G+ T K+DV+S G++L EL T
Sbjct:  273 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN----YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 457          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK_MOUSE4.017e-1332.02Tyrosine-protein kinase CSK OS=Mus musculus GN=Csk... [more]
CSK_CHICK4.017e-1332.02Tyrosine-protein kinase CSK OS=Gallus gallus GN=CS... [more]
STK4_OTOGA5.246e-1329.38Serine/threonine-protein kinase 4 OS=Otolemur garn... [more]
STK4_MOUSE5.246e-1329.38Serine/threonine-protein kinase 4 OS=Mus musculus ... [more]
STK4_MACMU5.246e-1329.38Serine/threonine-protein kinase 4 OS=Macaca mulatt... [more]
STK4_LEMCA5.246e-1329.38Serine/threonine-protein kinase 4 OS=Lemur catta G... [more]
STK4_HUMAN5.246e-1329.38Serine/threonine-protein kinase 4 OS=Homo sapiens ... [more]
STK4_CERAE5.246e-1329.38Serine/threonine-protein kinase 4 OS=Cercopithecus... [more]
STK4_BOVIN5.246e-1329.38Serine/threonine-protein kinase 4 OS=Bos taurus GN... [more]
SRC_RSVH15.246e-1331.41Tyrosine-protein kinase transforming protein Src O... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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