FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.701e-46
Identity = 99/211 (46.92%), Postives = 132/211 (62.56%), Query Frame = 3
Query:   69 TYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGD-MGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            ++AEL+  TN F  +  +  GGF  V RG L D   VAVK+    S QG  EF SE+ +LS  +HR++V L+G+C E    +LVYEY+  G L SHLYG    PL W  R ++ +GAARGL YLH     G I+HRD++  NIL+ +++   V DFGL+R  P  D   V T V G+FGYL PEY +  Q+T+K+DVYS GVVL E++  R
Sbjct:  478 SFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYGSTNPPLSWKQRLEVCIGAARGLHYLHTGSSQG-IIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCAR 687          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.701e-46
Identity = 96/213 (45.07%), Postives = 135/213 (63.38%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R+F+ +EL+ AT  F  +  +  GGF +V+ G L DG  VAVK+    S QG  EF +E+++LS  +HR++V LIG+C E+   +LVYE++ NG    HLYG++  PL W  R +I +G+ARGL YLH     G I+HRD++  NIL+       V DFGL++    G   V T V G+FGYL PEY +  Q+T+K+DVYS GVVL+E +  R
Sbjct:  512 RYFSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKNLAPLTWKQRLEICIGSARGLHYLHTGTAQG-IIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCAR 723          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.140e-46
Identity = 92/213 (43.19%), Postives = 141/213 (66.20%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F++  +E AT++FS++N +  GGF  V+RG L  G  VAVK+    S QG +EF +E  ++S  QH+N+V L+GFC+E   ++LVYE++ N SLD  L+    +  L+W+ R  I  G ARG+ YLH++ R+  I+HRD++ +NIL+  D  P + DFG+AR +  D       R+ GTFGY++PEYA  G  + K+DVYS GV+++E+I+G+
Sbjct:  333 FSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRL-TIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGK 544          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.140e-46
Identity = 95/212 (44.81%), Postives = 141/212 (66.51%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            F +  +E ATN F   N L +GGF  V++G L  G  VAVK+    S QG++EF +EV V++  QHRN+V L+G+C+E   ++LVYE++ N SLD  L+    +  L+W+ R KI  G ARG+ YLH++ R+  I+HRD++  NIL+  D  P + DFG+AR +  D    +  RV+GT+GY++PEYA  GQ + K+DVYS GV+++E+I+G
Sbjct:  314 FDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRL-TIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISG 524          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 183.726 bits (465), Expect = 8.019e-46
Identity = 101/221 (45.70%), Postives = 141/221 (63.80%), Query Frame = 3
Query:   42 VFGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP--LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            +F +  +  +Y +L  +TN F +AN +  GGF  V++  LPDG+ VA+K+      Q ++EF +EVE LS AQH N+V+L GFC     RLL+Y Y+ NGSLD  L+ R+  P  L+W  R +IA GAA+GL YLHE C    I+HRD++ +NIL+  +F   + DFGLAR     +  V T ++GT GY+ PEY Q+   T K DVYS GVVL+EL+T +
Sbjct:  714 LFQSNDKELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPH-ILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDK 933          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.019e-46
Identity = 100/214 (46.73%), Postives = 140/214 (65.42%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGR--DRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP-DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FT   +ELAT ++     + EGGF SV+RG L DGQ VAVK     S+QG +EF +E+ +LS  QH N+V L+G+C E  +++LVY ++ NGSL   LYG    R  L+W  R  IA+GAARGL YLH       ++HRD++ +NIL+ H     V DFG +++ P +GD  V   V GT GYL PEY ++ Q++EK+DV+S GVVL+E+++GR
Sbjct:  585 FTLEYIELATEKYK--TLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLH-TFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGR 795          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.019e-46
Identity = 98/204 (48.04%), Postives = 136/204 (66.67%), Query Frame = 3
Query:   90 ATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVET-RVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            AT+ FS  N L +GGF +V++G L +GQ VAVK+    S QGD EF +EV +L+  QHRN+V L+GFC E   ++LVYE++ N SLD  ++  + R  L W  R +I  G ARGL YLHE+ ++  I+HRD++ +NIL+  +  P V DFG AR     +   ET R+ GT GY+APEY   GQI+ K+DVYS GV+L+E+I+G
Sbjct:  349 ATDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLK-IIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISG 551          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.368e-45
Identity = 94/208 (45.19%), Postives = 140/208 (67.31%), Query Frame = 3
Query:   81 LELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLY-GRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            +E AT  FS+ N L +GGF  V +GVL DG  +AVK+    S+QG QEF +E  +++  QHRN+V ++GFC+E   ++LVYE++ N SLD  L+    +  L+W+ R KI VG ARG+ YLH +  +  I+HRD++ +NIL+  + EP V DFG+AR ++ D       RV+GT GY++PEY   GQ + K+DVYS GV+++E+I+G+
Sbjct:  314 IEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLK-IIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGK 520          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.368e-45
Identity = 95/213 (44.60%), Postives = 139/213 (65.26%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGR-DRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F +  + +AT+ FS  N + EGGF  V++G LPDG  +AVK+  + S QG+ EF +EV +++  QH+N+V L GF +++  RLLVYE+I N SLD  L+    +  L+W  R  I VG +RGL YLHE      I+HRD++ +N+L+     P + DFG+AR +  D    V  RV+GT+GY+APEYA  G+ + K DVYS GV+++E+ITG+
Sbjct:  321 FDFETIRVATDDFSLTNKIGEGGFGVVYKGHLPDGLEIAVKRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFP-IIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGK 532          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.368e-45
Identity = 96/212 (45.28%), Postives = 138/212 (65.09%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            F +  +  ATN F   N L +GGF  V++G  P G  VAVK+    S QG++EF +EV V++  QHRN+V L+G+C+E   ++LVYE++ N SLD  L+    +  L+W+ R KI  G ARG+ YLH++ R+  I+HRD++  NIL+  D  P V DFG+AR +  D       RV+GT+GY+APEYA  GQ + K+DVYS GV++ E+I+G
Sbjct:  496 FDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDSRL-TIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISG 706          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5241_ARATH4.701e-4646.92Probable receptor-like protein kinase At5g24010 OS... [more]
Y4391_ARATH4.701e-4645.07Probable receptor-like protein kinase At4g39110 OS... [more]
CRK35_ARATH6.140e-4643.19Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH6.140e-4644.81Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
PSKR1_ARATH8.019e-4645.70Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
NORK_PEA8.019e-4646.73Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CRK39_ARATH8.019e-4648.04Putative cysteine-rich receptor-like protein kinas... [more]
CRK33_ARATH1.368e-4545.19Putative cysteine-rich receptor-like protein kinas... [more]
CRK27_ARATH1.368e-4544.60Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK23_ARATH1.368e-4545.28Putative cysteine-rich receptor-like protein kinas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
back to top