FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14954 contig Ccv1_Contig14954:702..1399. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.787e-45
Identity = 99/221 (44.80%), Postives = 138/221 (62.44%), Query Frame = 3
Query:   45 FGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD--PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVL-GTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F  P R  T+A+L  ATN F   + +  GGF  V++ +L DG  VA+K+    S QGD+EF +E+E +   +HRN+V L+G+C     RLLVYE++  GSL+  L+   +    L WS RRKIA+G+ARGL +LH  C    I+HRDM+ +N+L+  + E  V DFG+AR     D  +    L GT GY+ PEY QS + + K DVYS GVVL+EL+TG+
Sbjct:  864 FEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPH-IIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGK 1083          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.787e-45
Identity = 103/225 (45.78%), Postives = 143/225 (63.56%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPD----------GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR--DPLEWSARRKIAVGAARGLRYLH-EECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMG-VETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F++AEL+ AT  F   + L EGGF  V +G + +          G V+AVK+      QG QE+ +EV  L    HR++V LIG+C+ED  RLLVYE++  GSL++HL+ R     PL W  R K+A+GAA+GL +LH  E RV   ++RD + +NIL+  ++   + DFGLA+  P GD   V TRV+GT GY APEY  +G +T K+DVYS GVVL+EL++GR
Sbjct:   56 FSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETRV---IYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGR 277          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 2.333e-45
Identity = 91/213 (42.72%), Postives = 144/213 (67.61%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR-DPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            + +  +E ATN+FS +N L EGGF +V++G L +G  VAVK+    S QG +EF +E  +++  QHRN+V L+GFC+E   ++L+YE++ N SLD  L+  ++   L+W+ R KI  G ARG+ YLH++ R+  I+HRD++ +NIL+  D  P + DFGLA  +  +   G   R+ GT+ Y++PEYA  GQ + K+D+YS GV+++E+I+G+
Sbjct:  338 YDFKTIEAATNKFSTSNKLGEGGFGAVYKGKLSNGTDVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQLDWTRRYKIIGGIARGILYLHQDSRLK-IIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGK 549          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.333e-45
Identity = 96/214 (44.86%), Postives = 139/214 (64.95%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMG-VETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R F+ +E++  T+ F E+N +  GGF  V++GV+  G  VA+K+    S QG  EF +E+E+LS  +H+++V LIG+C E G   L+Y+Y+  G+L  HLY   R  L W  R +IA+GAARGL YLH   +   I+HRD++  NIL+  ++   V DFGL++  P+ + G V T V G+FGYL PEY +  Q+TEK+DVYS GVVL E++  R
Sbjct:  507 RRFSLSEIKHGTHNFDESNVIGVGGFGKVYKGVIDGGTKVAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIGAARGLHYLHTGAKY-TIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCAR 719          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.047e-45
Identity = 96/215 (44.65%), Postives = 139/215 (64.65%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLA--SSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP--LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            +T + L++ATN FS+ N + EG    V+R   P+G+++A+K+   A  S Q +  F   V  +S  +H N+V L G+C E G+RLLVYEY+ NG+LD  L+  D     L W+AR K+A+G A+ L YLHE C +  IVHR+ +  NIL+  +  P + D GLA   P+ +  V T+V+G+FGY APE+A SG  T K+DVY+ GVV++EL+TGR
Sbjct:  383 YTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVC-LPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGR 596          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.047e-45
Identity = 99/221 (44.80%), Postives = 138/221 (62.44%), Query Frame = 3
Query:   51 NPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVL--PDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP---LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            N P    Y +L  AT+ F E   +  GGF +V RG L  P    +AVK+    S QG +EF +E+E L   +H+N+V L G+C +    LL+Y+YI NGSLDS LY R R     L W+AR KIA G A GL YLHEE     ++HRD++P+N+L+  D  P +GDFGLAR    G     T V+GT GY+APE A++G+ +  +DV++ GV+L+E+++GR
Sbjct:  344 NHPHRLRYKDLYAATDGFKENRIVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEK-VVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGR 563          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 3.047e-45
Identity = 94/211 (44.55%), Postives = 141/211 (66.82%), Query Frame = 3
Query:   72 YAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            Y  ++ ATN F+E+N +  GGF  V++G   +G+ VAVK+    S QG+ EF +EV V++  QHRN+V L+GF ++   R+LVYEY+ N SLD  L+   +   L+W  R  I  G ARG+ YLH++ R+  I+HRD++ +NIL+  D  P + DFG+AR +  D      +R++GT+GY+APEYA  GQ + K+DVYS GV+++E+I+GR
Sbjct:  343 YRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRL-TIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGR 552          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.047e-45
Identity = 94/211 (44.55%), Postives = 141/211 (66.82%), Query Frame = 3
Query:   72 YAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            Y  ++ ATN F+E+N +  GGF  V++G   +G+ VAVK+    S QG+ EF +EV V++  QHRN+V L+GF ++   R+LVYEY+ N SLD  L+   +   L+W  R  I  G ARG+ YLH++ R+  I+HRD++ +NIL+  D  P + DFG+AR +  D      +R++GT+GY+APEYA  GQ + K+DVYS GV+++E+I+GR
Sbjct:  341 YRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQLDWMQRYNIIGGIARGILYLHQDSRL-TIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGR 550          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.047e-45
Identity = 98/213 (46.01%), Postives = 139/213 (65.26%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F +  +  AT+ FS  N + +GGF SV++G LP G+ +AVK+    S QG+ EF +EV +L+  QHRN+V L+GFC E    +LVYE++ N SLD  ++  + R  L W  R +I  G ARGL YLHE+ ++  I+HRD++ +NIL+     P V DFG+AR +  D    V  +V+GTFGY+APEY ++   + K DVYS GVVL+E+ITGR
Sbjct:  327 FDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLR-IIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFSVKTDVYSFGVVLLEMITGR 538          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.047e-45
Identity = 96/221 (43.44%), Postives = 143/221 (64.71%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR----DP-----LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F +  LE AT++FS  N L +GGF  V++G+LP+   VAVK+    S QG QEF +EV +++  QH+N+V L+GFC+E   ++LVYE++ N SL+  L+G  +    DP     L+W  R  I  G  RGL YLH++ R+  I+HRD++ +NIL+  D  P + DFG+AR ++ D       RV+GTFGY+ PEY   GQ + K+DVYS GV+++E++ G+
Sbjct:  309 FDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRL-TIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGK 528          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BRI1_ARATH1.787e-4544.80Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
APK1A_ARATH1.787e-4545.78Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
CRK11_ARATH2.333e-4542.72Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
ANX2_ARATH2.333e-4544.86Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
SRF8_ARATH3.047e-4544.65Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
LRKA2_ARATH3.047e-4544.80Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK8_ARATH3.047e-4544.55Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK6_ARATH3.047e-4544.55Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK38_ARATH3.047e-4546.01Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK32_ARATH3.047e-4543.44Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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