FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14954 contig Ccv1_Contig14954:702..1399. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.980e-45
Identity = 93/211 (44.08%), Postives = 140/211 (66.35%), Query Frame = 3
Query:   72 YAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            Y  ++ ATN FSE N +  GGF  V++G   +G  VAVK+    S QGD EF +EV V++  +H+N+V ++GF +E   R+LVYEY+ N SLD+ L+    +  L W+ R  I  G ARG+ YLH++ R+  I+HRD++ +NIL+  D  P + DFG+AR +  D      +R++GT+GY++PEYA  GQ + K+DVYS GV+++E+I+GR
Sbjct:  326 YRAIQAATNDFSENNKIGRGGFGDVYKGTFSNGTEVAVKRLSKTSEQGDTEFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSLDNFLFDPAKKGQLYWTQRYHIIGGIARGILYLHQDSRL-TIIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGR 535          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.198e-45
Identity = 98/219 (44.75%), Postives = 136/219 (62.10%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDP-----LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R+F + EL+ AT  F E      GGF  V+ G +  G  VA+K+   +S QG  EF +E+++LS  +HR++V LIGFC E+   +LVYEY+ NG L  HLYG ++ DP     L W  R +I +G+ARGL YLH     G I+HRD++  NIL+  +    V DFGL++  P  +  V T V G+FGYL PEY +  Q+T+K+DVYS GVVL E++  R
Sbjct:  511 RYFPFTELQTATQNFDENAVCGVGGFGKVYIGEIDGGTQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQG-IIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCAR 728          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.198e-45
Identity = 106/232 (45.69%), Postives = 142/232 (61.21%), Query Frame = 3
Query:   21 TCQHKAP----VFGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP-DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            T QH  P    +F    R FTY+E+E  T+ F     L EGGF  V+ G+L   Q +AVK    +S QG +EF +EVE+L    H N+V L+G+C E+    L+YEY  NG L  HL G R   PL+WS+R KI V  A+GL YLH  C+   +VHRD++  NIL+   F+  + DFGL+R  P  G+  V T V GT GYL PEY ++ ++ EK+DVYS G+VL+E+IT R
Sbjct:  545 TVQHGLPNRPSIFTQTKR-FTYSEVEALTDNFERV--LGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGGSPLKWSSRLKIVVETAQGLEYLHTGCKPP-MVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSR 772          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 5.198e-45
Identity = 94/213 (44.13%), Postives = 142/213 (66.67%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F    +E AT+ FSE N L +GGF  V++G+L +G  +AVK+    S QG+ EF +EV V++  QH N+V L+GF ++   +LLVYE++ N SLD  L+    R+ L+W+ RR I  G  RG+ YLH++ R+  I+HRD++ +NIL+  D  P + DFG+AR +  D  +    RV+GTFGY++PEY   GQ + K+DVYS GV+++E+I+G+
Sbjct:  327 FDLKTIESATSNFSERNKLGKGGFGEVYKGMLMNGTEIAVKRLSKTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVSNKSLDYFLFDPTKRNQLDWTMRRNIIGGITRGILYLHQDSRLK-IIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGK 538          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.789e-45
Identity = 99/225 (44.00%), Postives = 142/225 (63.11%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPD----------GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLY---GRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMG-VETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F++ EL+LAT  F   + + EGGF  V RG L +          G V+AVK+      QG +E+ +E+  L    H N+V LIG+C+ED +RLLVYE++  GSL++HL+    +D  PL W  R K+A+ AA+GL +LH +     +++RD++ +NIL+  DF   + DFGLAR  P G+   V TRV+GTFGY APEY  +G +  ++DVYS GVVL+EL+ GR
Sbjct:   49 FSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSD--PVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGR 271          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.866e-45
Identity = 97/210 (46.19%), Postives = 136/210 (64.76%), Query Frame = 3
Query:   72 YAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDM-GVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            +A ++ ATN F E+  +  GGF  V++G L DG  VAVK+    S QG  EF +E+E+LS  +HR++V LIG+C E+   +L+YEY+ NG++ SHLYG     L W  R +I +GAARGL YLH       ++HRD++  NIL+  +F   V DFGL++  P+ D   V T V G+FGYL PEY +  Q+T+K+DVYS GVVL E++  R
Sbjct:  475 FAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLPSLTWKQRLEICIGAARGLHYLHTGDSKP-VIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCAR 683          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.158e-44
Identity = 94/213 (44.13%), Postives = 140/213 (65.73%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F    +E AT  FSE N L  GGF  V++G+L +G  +AVK+    S QG+ EF +EV V++  QH N+V L+GF ++   +LLVYE++ N SLD  L+    R+ L+W+ RR I  G  RG+ YLH++ R+  I+HRD++ +NIL+  D  P + DFG+AR +  D  +    RV+GTFGY++PEY   GQ + K+DVYS GV+++E+I+G+
Sbjct:  347 FDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFDPNKRNQLDWTVRRNIIGGITRGILYLHQDSRLK-IIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGK 558          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.975e-44
Identity = 96/215 (44.65%), Postives = 143/215 (66.51%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGR-DRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVE---TRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F ++ L+ AT+ FS  N L EGGF +V++GVL DGQ +AVK+    + QG+ EF +E  +++  QHRN+V L+G+ +E   RLLVYE++ + SLD  ++     + LEW  R KI  G ARGL YLH++ R+  I+HRD++ +NIL+  +  P + DFG+AR   D D   +    R++GTFGY+APEY   GQ + K DVYS GV+++E+I+G+
Sbjct:  332 FDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGNELEWEIRYKIIGGVARGLLYLHQDSRLR-IIHRDLKASNILLDEEMTPKIADFGMARLF-DIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGK 544          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.580e-44
Identity = 100/219 (45.66%), Postives = 143/219 (65.30%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQ-VVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR---DPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPD--GDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R F+  E++ ATN F +   +  GGF SV++G +  G  +VAVK+ ++ S+QG +EF +E+E+LS  +H ++V LIG+C ED   +LVYEY+ +G+L  HL+ RD+    PL W  R +I +GAARGL+YLH   +   I+HRD++  NIL+  +F   V DFGL+R  P       V T V GTFGYL PEY +   +TEK+DVYS GVVL+E++  R
Sbjct:  504 RRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKY-TIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCR 721          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.580e-44
Identity = 93/212 (43.87%), Postives = 133/212 (62.74%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR-DPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F Y+ LE AT  F  AN L +GGF +V++GVLPDG+ +AVK+    +     +F +EV ++S  +H+N+V L+G        LLVYEY+ N SLD  ++  +R   L+W  R  I VG A GL YLHE+  V  I+HRD++ +NIL+    +  + DFGLAR   D    + T + GT GY+APEY   GQ+TE  DVYS GV+++E++TG+
Sbjct:  313 FKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVK-IIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGK 523          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK7_ARATH3.980e-4544.08Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
Y5613_ARATH5.198e-4544.75Probable receptor-like protein kinase At5g61350 OS... [more]
Y2289_ARATH5.198e-4545.69Probable LRR receptor-like serine/threonine-protei... [more]
CRK18_ARATH5.198e-4544.13Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
Y3545_ARATH6.789e-4544.00Probable receptor-like protein kinase At3g55450 OS... [more]
HERK_ARATH8.866e-4546.19Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
CRK17_ARATH1.158e-4444.13Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK26_ARATH1.975e-4444.65Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
Y5900_ARATH2.580e-4445.66Putative receptor-like protein kinase At5g39000 OS... [more]
CRK2_ARATH2.580e-4443.87Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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