FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.580e-44
Identity = 94/212 (44.34%), Postives = 139/212 (65.57%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            F +  +  AT+ F   N L +GGF  V++G  P G  VAVK+    S QG++EF +EV V++  QHRN+V L+G+C+E   ++LVYE++ N SLD  L+    +  L+WS R KI  G ARG+ YLH++ R+  I+HRD++  NIL+  D  P V DFG+AR +  D       RV+GT+GY+APEYA  G+ + K+DVYS GV+++E+++G
Sbjct:  332 FDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQDSRL-TIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSG 542          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.369e-44
Identity = 104/225 (46.22%), Postives = 137/225 (60.89%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRG-VLPDGQ------VVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGR----RLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGD-MGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R F+Y EL  AT  FS    + EGGF  V++G +L +G       VVA+K+      QG +++ +EV+ L    H NVV LIG+C EDG     RLLVYEY+ N SL+ HL+ R    L W  R +I +GAA GL YLH+      +++RD + +N+L+   F P + DFGLAR  PDGD   V T  +GT GY APEY Q+G +  K+DVYS GVVL E+ITGR
Sbjct:   72 RVFSYEELSKATYVFSRKLVIGEGGFGIVYKGKILSNGDSSDPPLVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSHTLPWKKRLEIMLGAAEGLTYLHDLK----VIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGR 292          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.369e-44
Identity = 100/219 (45.66%), Postives = 143/219 (65.30%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQ-VVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR---DPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPD--GDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R F+  E++ ATN F E   +  GGF SV++G +  G  +VAVK+ ++ S+QG +EF +E+E+LS  +H ++V LIG+C +D   +LVYEY+ +G+L  HL+ RD+    PL W  R +I +GAARGL+YLH   +   I+HRD++  NIL+  +F   V DFGL+R  P       V T V GTFGYL PEY +   +TEK+DVYS GVVL+E++  R
Sbjct:  511 RRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKY-TIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCR 728          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.369e-44
Identity = 100/209 (47.85%), Postives = 132/209 (63.16%), Query Frame = 3
Query:   78 ELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGR--DRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            EL  +TN FS+AN +  GGF  V++   PDG   AVK+      Q ++EF +EVE LS A+H+N+V L G+C     RLL+Y ++ NGSLD  L+ R      L W  R KIA GAARGL YLH+ C    ++HRD++ +NIL+   FE  + DFGLAR     D  V T ++GT GY+ PEY+QS   T + DVYS GVVL+EL+TGR
Sbjct:  746 ELLKSTNNFSQANIIGCGGFGLVYKANFPDGSKAAVKRLSGDCGQMEREFQAEVEALSRAEHKNLVSLQGYCKHGNDRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPN-VIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGR 953          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.369e-44
Identity = 97/205 (47.32%), Postives = 133/205 (64.88%), Query Frame = 3
Query:   90 ATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP--LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            +T+ F++AN +  GGF  V++  LPDG  VA+K+    + Q D+EF +EVE LS AQH N+V L+G+C     +LL+Y Y+ NGSLD  L+ +   P  L+W  R +IA GAA GL YLH+ C    I+HRD++ +NIL++  F   + DFGLAR     D  V T ++GT GY+ PEY Q+   T K DVYS GVVL+EL+TGR
Sbjct:  739 STSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPH-ILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGR 942          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.369e-44
Identity = 96/214 (44.86%), Postives = 136/214 (63.55%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMG-VETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R F+  E++  T  F ++N +  GGF  V++GV+     VAVK+    S QG  EF +E+E+LS  +H+++V LIG+C E G   LVY+Y+  G+L  HLY   +  L W  R +IA+GAARGL YLH   +   I+HRD++  NILV  ++   V DFGL++  P+ + G V T V G+FGYL PEY +  Q+TEK+DVYS GVVL E++  R
Sbjct:  503 RRFSLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDGTTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGAKY-TIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCAR 715          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.747e-44
Identity = 97/216 (44.91%), Postives = 137/216 (63.43%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQ-----HRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FTYA++  AT+ FSE   +  GG+ +V+RGVLPDG+ VAVK+ +   ++ ++EF +E+EVLS        H N+V L G+C++   ++LV+EY+  GSL+  +   D+  L+W  R  IA   ARGL +LH EC    IVHRD++ +N+L+       V DFGLAR    GD  V T + GT GY+APEY Q+ Q T + DVYS GV+ +EL TGR
Sbjct:  802 FTYADILKATSNFSEERVVGRGGYGTVYRGVLPDGREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELI--TDKTKLQWKKRIDIATDVARGLVFLHHECYPS-IVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGR 1014          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 5.747e-44
Identity = 98/214 (45.79%), Postives = 138/214 (64.49%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGR--DRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP-DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FT   +E AT ++     + EGGF SV+RG L DGQ VAVK     S+QG +EF +E+ +LS  QH N+V L+G+C E  +++LVY ++ NGSL   LYG    R  L+W  R  IA+GAARGL YLH       ++HRD++ +NIL+       V DFG +++ P +GD  V   V GT GYL PEY ++ Q++EK+DV+S GVVL+E+++GR
Sbjct:  586 FTLEYIEQATEQYK--TLIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLH-TFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGR 796          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.747e-44
Identity = 96/228 (42.11%), Postives = 143/228 (62.72%), Query Frame = 3
Query:   54 PPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPD----------GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR--DPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMG-VETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            P + FT+ EL+LAT  F   + + EGGF  V +G L +          G V+AVK+      QG +E+ +E+  L    H N+V LIG+C+ED  RLLVYE++  GSL++HL+ R     PL W  R  +A+ AA+GL +LH +     +++RD++ +NIL+  D+   + DFGLAR  P GD+  V TRV+GT+GY APEY  SG +  ++DVYS GV+L+E+++G+
Sbjct:   51 PVKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSD--PVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGK 276          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.803e-44
Identity = 93/223 (41.70%), Postives = 144/223 (64.57%), Query Frame = 3
Query:   66 FTYAELEL----------ATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            + + ELEL          AT  FS  N L +GGF  V++G L DG+ +AVK+    S QG  EF +EV +++  QH N+V ++G C+E   ++L+YEY+ N SLDS+L+G+  R  L W+ R  I  G ARGL YLH++ R   I+HRD++ +NIL+  +  P + DFG+AR ++ D       +V+GT+GY++PEYA  G  +EK+DV+S GV+++E+++G+
Sbjct:  506 YKFEELELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFR-IIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGK 727          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK20_ARATH2.580e-4444.34Putative cysteine-rich receptor-like protein kinas... [more]
Y5707_ARATH3.369e-4446.22Probable receptor-like protein kinase At5g47070 OS... [more]
Y5389_ARATH3.369e-4445.66Probable receptor-like protein kinase At5g38990 OS... [more]
PSKR2_ARATH3.369e-4447.85Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
PSKR1_DAUCA3.369e-4447.32Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
ANX1_ARATH3.369e-4444.86Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y1743_ARATH5.747e-4444.91Probable LRR receptor-like serine/threonine-protei... [more]
NORK_MEDTR5.747e-4445.79Nodulation receptor kinase OS=Medicago truncatula ... [more]
BIK1_ARATH5.747e-4442.11Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
SRK6_BRAOE9.803e-4441.70Putative serine/threonine-protein kinase receptor ... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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