FC920842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC5_MAIZE (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays GN=SODCC.2 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.869e-34 Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V+G + TQE GPT V V+GL PG HGFH+H GDTTNGC+STG H+NP + HGAP+DE RHAGDLGN+ A A+GVA + D+QI L GPN+++GRA VVH Sbjct: 8 LGSSDGVKGTIFFTQEGDGPTAVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum GN=SODCC.5 PE=3 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 6.391e-34 Identity = 64/112 (57.14%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V G + TQ+ PTTVN ++GL PG HGFH+H GDTTNGC+STG H+NP HGAP+DEVRHAGDLGNI +G A TI D QI L GP +++GRA VVH Sbjct: 8 LNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSJ (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. japonica GN=SODCC1 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.391e-34 Identity = 64/106 (60.38%), Postives = 78/106 (73.58%), Query Frame = 3 Query: 345 VEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 V+G + QE GPTTV V+GL PG HGFH+H GDTTNGC+STG H+NP HGAP+DE RHAGDLGN+ A +GVA +VD+QI L GPN+++GRA VVH Sbjct: 14 VKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSI (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. indica GN=SODCC1 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 6.391e-34 Identity = 64/106 (60.38%), Postives = 78/106 (73.58%), Query Frame = 3 Query: 345 VEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 V+G + QE GPTTV V+GL PG HGFH+H GDTTNGC+STG H+NP HGAP+DE RHAGDLGN+ A +GVA +VD+QI L GPN+++GRA VVH Sbjct: 14 VKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 8.346e-34 Identity = 65/112 (58.04%), Postives = 76/112 (67.86%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L ++ V G + +QE GPTTV + GL PG HGFH+H GDTTNGCISTG HFNPN HGAP+DE RHAGDLGNI +G TI DN I L G N+++GRA VVH Sbjct: 8 LSNSNEVSGTINFSQEGNGPTTVTGTLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGAPEDETRHAGDLGNINVGDDGTVSFTITDNHIPLTGTNSIIGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.859e-33 Identity = 64/113 (56.64%), Postives = 75/113 (66.37%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKGT V G V Q GP T+ +TGLTPG HGFH+H +GD TNGCIS G H+NP + HG P DE RH GDLGN+ AN NGVAE I D Q+ L G +++GR VVHE Sbjct: 7 LKGTGEVTGTVLFEQAADGPVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHE 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_BRAOC (Superoxide dismutase [Cu-Zn] OS=Brassica oleracea var. capitata GN=SODCC PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.428e-33 Identity = 65/112 (58.04%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V+G + T E G TTV V+GL PG HGFH+H GD TNGC+STG HFNP+ THGAP+D RHAGDLGNI+ +G A TI D+QI L GPN++VGRA VVH Sbjct: 8 LNSSEGVKGTIFFTHEGNGATTVTGTVSGLRPGLHGFHVHALGDNTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNIIVGDDGTATFTITDSQIPLSGPNSIVGRAIVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_ARATH (Superoxide dismutase [Cu-Zn] OS=Arabidopsis thaliana GN=SODCC PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.142e-33 Identity = 67/112 (59.82%), Postives = 78/112 (69.64%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V G + TQE G TTV+ V+GL PG HGFH+H GDTTNGC+STG HFNP+ THGAP+D RHAGDLGNI +G A TI D QI L GPN++VGRA VVH Sbjct: 8 LNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.142e-33 Identity = 63/112 (56.25%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V+G + TQE GPTTV ++GL PG HGFH+H GDTTNGC+STG HFNP HGAP+DE RHAGDLGN+ +G IVD+QI L G N+++GRA VVH Sbjct: 8 LGSSEGVKGTIYFTQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGNEHGAPEDETRHAGDLGNVTVGEDGTVNVNIVDSQIPLSGSNSIIGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.410e-33 Identity = 64/112 (57.14%), Postives = 80/112 (71.43%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V+G + +QE GPT+V V+GL PG HGFH+H GDTTNGC+STG HFNP HGAP+DE RHAGDLGNI A A+GVA + D+QI L G ++++GRA VVH Sbjct: 8 LASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVH 119 The following BLAST results are available for this feature:
BLAST of FC920842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920842 ID=FC920842; Name=FC920842; organism=Citrus clementina; type=EST; length=666bpback to top |