FC920842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_DANRE (Superoxide dismutase [Cu-Zn] OS=Danio rerio GN=sod1 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.580e-32 Identity = 62/114 (54.39%), Postives = 79/114 (69.30%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKGT V G V QE + P V +TGLTPG HGFH+H +GD TNGCIS G HFNP++ THG P D VRH GDLGN+ A+A+GVA+ I D ++L G ++++GR V+HE Sbjct: 9 LKGTGEVTGTVYFNQEGEKKPVKVTGEITGLTPGKHGFHVHAFGDNTNGCISAGPHFNPHDKTHGGPTDSVRHVGDLGNVTADASGVAKIEIEDAMLTLSGQHSIIGRTMVIHE 122
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_SOLCS (Superoxide dismutase [Cu-Zn] OS=Solidago canadensis var. scabra GN=SODCC PE=2 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 5.981e-32 Identity = 63/113 (55.75%), Postives = 79/113 (69.91%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V G + +QE +G PTTV ++GL PGPHGFH+H GDTTNGC+STG H+NP+ HGAP DE RHAGDLGN+ +G A+ TIVD QI L G +++GRA VVH Sbjct: 8 LSSSEGVSGTIFFSQEAEGAPTTVTGDLSGLKPGPHGFHVHALGDTTNGCMSTGPHYNPHGKDHGAPDDEHRHAGDLGNVTVGEDGTAKFTIVDKQIPLIGAQSIIGRAVVVH 120
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CARCR (Superoxide dismutase [Cu-Zn] OS=Caretta caretta PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 5.981e-32 Identity = 59/107 (55.14%), Postives = 75/107 (70.09%), Query Frame = 3 Query: 345 VEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 V+G++ Q+ GP T++ +TGLT G HGFH+HE+GD TNGC S GAHFNP HG P+D RH GDLGN++AN GVAE I D+ ISL G +++GR VVHE Sbjct: 28 VKGIIYFEQQGNGPVTLSGSITGLTEGKHGFHVHEFGDNTNGCTSAGAHFNPPGKNHGGPQDNERHVGDLGNVIANKEGVAEVCIKDSLISLTGSQSIIGRTMVVHE 134
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.020e-31 Identity = 63/112 (56.25%), Postives = 76/112 (67.86%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L G+ V+G V QE GPTT+ ++GL PG HGFH+H GDTTNGC+STG HFNP HGAP+D RHAGDLGN+ +G T+ D+QI L G N+VVGRA VVH Sbjct: 8 LTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQIPLTGLNSVVGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_HYLLA (Superoxide dismutase [Cu-Zn] OS=Hylobates lar GN=SOD1 PE=2 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 1.740e-31 Identity = 62/114 (54.39%), Postives = 80/114 (70.18%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG S V+G++ Q E GP V R+TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ +GVA+ +I D+ ISL G ++++GR VVHE Sbjct: 9 LKGDSPVQGIINFEQKESNGPVKVYGRITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVAKVSIEDSVISLSGDHSIIGRTLVVHE 122
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CHICK (Superoxide dismutase [Cu-Zn] OS=Gallus gallus GN=SOD1 PE=1 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 1.740e-31 Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 +KG + VEGV+ Q+ GP V ++TGL+ G HGFH+HE+GD TNGC S GAHFNP HG PKD RH GDLGN+ A GVAE I D+ ISL GP+ ++GR VVH Sbjct: 10 MKGDAPVEGVIHFQQQGSGPVKVTGKITGLSDGDHGFHVHEFGDNTNGCTSAGAHFNPEGKQHGGPKDADRHVGDLGNVTAK-GGVAEVEIEDSVISLTGPHCIIGRTMVVH 120
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC2_BRAJU (Superoxide dismutase [Cu-Zn] 2 OS=Brassica juncea GN=SODCC2 PE=2 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 2.969e-31 Identity = 64/112 (57.14%), Postives = 76/112 (67.86%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V+G + QE G TTV V+GL PG HGFH+H GDTTNG +STG HFNP+ HGAP+D RHAGDLGNI+ +G A TI D QI L GPN++VGRA VVH Sbjct: 8 LNSSEGVKGTIFFAQEGEGKTTVTGTVSGLKPGLHGFHVHALGDTTNGSMSTGPHFNPDGKQHGAPEDANRHAGDLGNIIVGDDGTATFTITDCQIPLSGPNSIVGRAVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CAPAN (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum GN=SODCC PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.877e-31 Identity = 61/112 (54.46%), Postives = 74/112 (66.07%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L + V G + +Q+ PTTV V+GL PG HGFH+H GDTTNGC+STG H+NP HGAP+DE RHAGDLGNI +G A TI D QI L GP +++GR VVH Sbjct: 8 LSSSECVSGTILFSQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDENRHAGDLGNITVGEDGTASFTITDEQIPLTGPQSIIGRGVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC2_XENLA (Superoxide dismutase [Cu-Zn] B OS=Xenopus laevis GN=sod1-B PE=1 SV=3) HSP 1 Score: 134.42 bits (337), Expect = 5.064e-31 Identity = 62/113 (54.87%), Postives = 79/113 (69.91%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 L G+ +V+GVV Q+D G +V ++ GLT G HGFH+H +GD TNGC+S G+HFNP N HGAP D RH GDLGN+ A GVA+ I D+ ISL GPN+++GR VVHE Sbjct: 8 LAGSGDVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPENKNHGAPGDTDRHVGDLGNVTAE-GGVAQFKITDSLISLKGPNSIIGRTAVVHE 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_HAECO (Superoxide dismutase [Cu-Zn] OS=Haemonchus contortus GN=SOD PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.613e-31 Identity = 61/113 (53.98%), Postives = 78/113 (69.03%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L+G V G V +Q+ + P + + GLTPG HGFH+H+YGD+TNGC S G HFNP N THG PKD+VRH GDLGN+ A A+GVA I D+ + + G +TVVGR+ VVH Sbjct: 9 LRGDPGVTGTVWFSQDKESDPCVIKGEIKGLTPGLHGFHVHQYGDSTNGCTSAGPHFNPFNKTHGGPKDDVRHVGDLGNVEAGADGVAHFEIKDHLVKIHGEHTVVGRSLVVH 121 The following BLAST results are available for this feature:
BLAST of FC920842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920842 ID=FC920842; Name=FC920842; organism=Citrus clementina; type=EST; length=666bpback to top |