FC920842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_HALRO (Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 8.637e-31 Identity = 59/107 (55.14%), Postives = 76/107 (71.03%), Query Frame = 3 Query: 342 NVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 +V+G + Q+ G TV V+GL PG HGFH+HEYGD TNGC S+G HFNP HGAP+D++RH GDLGNI A+++GVA I D ISL G ++++GRA VVH Sbjct: 12 SVKGTLNFKQDAIGSCTVTGEVSGLIPGKHGFHIHEYGDLTNGCTSSGGHFNPFKQIHGAPEDDIRHVGDLGNITADSSGVATVNITDRMISLTGEHSIIGRAVVVH 118
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODE_ONCVO (Extracellular superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-4 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.128e-30 Identity = 62/113 (54.87%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGP-TTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L+G + V G++ Q GG TT++ V+GLTPG HGFH+H+YGD TNGC S G H+NP THG P D ++H GDLGNIVA ANGVAE I I L GP +V+G + VVH Sbjct: 51 LRGDAGVSGIIYFQQGSGGSITTISGSVSGLTPGLHGFHVHQYGDQTNGCTSAGDHYNPFGKTHGGPNDRIKHIGDLGNIVAGANGVAEVYINSYDIKLRGPLSVIGHSLVVH 163
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CAEEL (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-1 PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.473e-30 Identity = 59/107 (55.14%), Postives = 76/107 (71.03%), Query Frame = 3 Query: 345 VEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 V G + +TQ+ + + + GLTPG HGFH+H+YGD+TNGCIS G HFNP THG PK E+RH GDLGN+ A A+GVA+ + D ++L GPNTVVGR+ VVH Sbjct: 36 VTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVH 142
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC1_XENLA (Superoxide dismutase [Cu-Zn] A OS=Xenopus laevis GN=sod1-A PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.473e-30 Identity = 61/113 (53.98%), Postives = 76/113 (67.26%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 L G+ +V+GVV Q+D G TV ++ GLT G HGFH+H +GD TNGC+S G HFNP N HG+PKD RH GDLGN+ A GVA+ D QISL G +++GR VVHE Sbjct: 8 LAGSGDVKGVVRFEQQDDGDVTVEGKIEGLTDGNHGFHIHVFGDNTNGCLSAGPHFNPQNKNHGSPKDADRHVGDLGNVTAE-GGVAQFKFTDPQISLKGERSIIGRTAVVHE 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_RAT (Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus GN=Sod1 PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 5.598e-30 Identity = 59/114 (51.75%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGG-PTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG V+GV+ Q+ G P V+ ++TGLT G HGFH+H+YGD T GC + G HFNP++ HG P DE RH GDLGN+ A +GVA +I D ISL G ++++GR VVHE Sbjct: 9 LKGDGPVQGVIHFEQKASGEPVVVSGQITGLTEGEHGFHVHQYGDNTQGCTTAGPHFNPHSKKHGGPADEERHVGDLGNVAAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHE 122
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_HORSE (Superoxide dismutase [Cu-Zn] OS=Equus caballus GN=SOD1 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 7.312e-30 Identity = 59/114 (51.75%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG V GV+ Q+ +GGP + + GLT G HGFH+HE+GD T GC + GAHFNP + HG PKDE RH GDLGN+ A+ NG A+ + D+ ISL G ++++GR VVHE Sbjct: 9 LKGDGPVHGVIHFEQQQEGGPVVLKGFIEGLTKGDHGFHVHEFGDNTQGCTTAGAHFNPLSKKHGGPKDEERHVGDLGNVTADENGKADVDMKDSVISLSGKHSIIGRTMVVHE 122
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC1_DICDI (Superoxide dismutase [Cu-Zn] 1 OS=Dictyostelium discoideum GN=sodA PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.312e-30 Identity = 65/113 (57.52%), Postives = 75/113 (66.37%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQED-GGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 +KG V GVV TQE+ P TVN +TGL G HGFH+H +GDTTNGC+S G HFNP HGAP DE RH GDLGNIVA+ + TI D ISL G +T+VGR VVH Sbjct: 9 IKG-EKVNGVVKFTQENKDSPVTVNYDITGLEKGEHGFHVHAFGDTTNGCVSAGPHFNPFGKNHGAPSDEDRHVGDLGNIVADGESNTKGTISDKIISLFGEHTIVGRTMVVH 120
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_RABIT (Superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD1 PE=1 SV=3) HSP 1 Score: 130.183 bits (326), Expect = 9.550e-30 Identity = 60/113 (53.10%), Postives = 73/113 (64.60%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG VE + Q+ GP V R+TGLT G H FH+H++GD GC S G HFNP + HG PKDE RH GDLGN+ A +NGVA+ I D+ ISL G +V+GR VVHE Sbjct: 9 LKGDGPVEATIHFEQKGTGPVVVKGRITGLTEGLHEFHVHQFGDNRQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAGSNGVADVLIEDSVISLSGDMSVIGRTLVVHE 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_MACMU (Superoxide dismutase [Cu-Zn] OS=Macaca mulatta GN=SOD1 PE=2 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.247e-29 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG S V+G + Q E GP V +TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A +GVA+ + D+ ISL G ++++GR VVHE Sbjct: 9 LKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHE 122
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_MACFU (Superoxide dismutase [Cu-Zn] OS=Macaca fuscata fuscata GN=SOD1 PE=2 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.247e-29 Identity = 60/114 (52.63%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG S V+G + Q E GP V +TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A +GVA+ + D+ ISL G ++++GR VVHE Sbjct: 9 LKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHE 122 The following BLAST results are available for this feature:
BLAST of FC920842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920842 ID=FC920842; Name=FC920842; organism=Citrus clementina; type=EST; length=666bpback to top |