FC920842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CEBAP (Superoxide dismutase [Cu-Zn] OS=Cebus apella GN=SOD1 PE=2 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.379e-28 Identity = 58/114 (50.88%), Postives = 75/114 (65.79%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG V+G + Q E GP V +TGL G HGFH+H++GD T GC S G HFNP + HG P+DE RH GDLGN+ A +GVA+ +I D+ ISL G ++++GR VVHE Sbjct: 9 LKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHE 122
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CALJA (Superoxide dismutase [Cu-Zn] OS=Callithrix jacchus GN=SOD1 PE=2 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.379e-28 Identity = 58/114 (50.88%), Postives = 75/114 (65.79%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG V+G + Q E GP V +TGL G HGFH+H++GD T GC S G HFNP + HG P+DE RH GDLGN+ A +GVA+ +I D+ ISL G ++++GR VVHE Sbjct: 9 LKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHE 122
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_BOSMU (Superoxide dismutase [Cu-Zn] OS=Bos mutus grunniens GN=SOD1 PE=2 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.379e-28 Identity = 59/113 (52.21%), Postives = 73/113 (64.60%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG V+G + + G V +TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ NGVA IVD+ ISL G +++GR VVHE Sbjct: 9 LKGDGPVQGTIHF-EAKGDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAVVDIVDSLISLSGEYSIIGRTMVVHE 120
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CRYGA (Superoxide dismutase [Cu-Zn] OS=Cryptococcus gattii GN=SOD1 PE=2 SV=3) HSP 1 Score: 125.176 bits (313), Expect = 3.072e-28 Identity = 60/114 (52.63%), Postives = 73/114 (64.04%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 LKG S V GV+T TQE +G P TV+ + L GFH+HE+GD TNGC S G HFNP+ HGAP D RH GDLGN+ + NGVA I D +SL GP +++GR VVH Sbjct: 8 LKGDSPVTGVITFTQEKEGAPVTVSGDIKNLDANAERGFHVHEFGDNTNGCTSAGPHFNPHGKNHGAPSDSERHVGDLGNVKTDGNGVASVNISDKSLSLFGPYSIIGRTIVVH 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC6_DICDI (Probable superoxide dismutase [Cu-Zn] 6 OS=Dictyostelium discoideum GN=sodF PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.072e-28 Identity = 61/107 (57.01%), Postives = 77/107 (71.96%), Query Frame = 3 Query: 345 VEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 VEG VTL+QE +G P +N V+GLTPG HG H+HE+GDT+NGCIS G H+NP + HG+P D RH GDLGNI A +NGVA +I D +SL G +V+GR V+H Sbjct: 13 VEGKVTLSQECEGSPIYINGTVSGLTPGQHGMHVHEFGDTSNGCISAGDHYNPLHREHGSPLDVERHIGDLGNIKALSNGVATISIRDTIMSLFGDISVMGRTMVIH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_BOVIN (Superoxide dismutase [Cu-Zn] OS=Bos taurus GN=SOD1 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.012e-28 Identity = 59/113 (52.21%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG V+G + + G V +TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ NGVA IVD ISL G +++GR VVHE Sbjct: 9 LKGDGPVQGTIHF-EAKGDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHE 120
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_BOMMO (Superoxide dismutase [Cu-Zn] OS=Bombyx mori PE=1 SV=3) HSP 1 Score: 124.79 bits (312), Expect = 4.012e-28 Identity = 60/109 (55.05%), Postives = 72/109 (66.06%), Query Frame = 3 Query: 342 NVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVA-NANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 +V G V Q+D P V+ V GLT G HGFH+HE+GD TNGC S GAHFNP HG P VRH GDLGNI A +GV + +I D+QISL GPN+++GR VVH Sbjct: 12 DVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVH 120
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_XIPGL (Superoxide dismutase [Cu-Zn] OS=Xiphias gladius GN=sod1 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.240e-28 Identity = 61/115 (53.04%), Postives = 75/115 (65.22%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVN--VRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 L+G G V QE G V + + GLTPG HGFH+H +GD TNGCIS G HFNP + H PKDE RH GDLGN+ A+ANGVA+ I D +ISL GP +++GR V+HE Sbjct: 9 LRGAGETTGTVYFEQE-GNANAVGKGIILKGLTPGEHGFHVHGFGDNTNGCISAGPHFNPASKKHAGPKDEDRHVGDLGNVTADANGVAKIDITD-KISLTGPYSIIGRTMVIHE 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_SHEEP (Superoxide dismutase [Cu-Zn] OS=Ovis aries GN=SOD1 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.240e-28 Identity = 59/113 (52.21%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG V+G + + G V +TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ NGVA IVD ISL G +++GR VVHE Sbjct: 9 LKGDGPVQGTIRF-EAKGDKVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHE 120
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_PONPY (Superoxide dismutase [Cu-Zn] OS=Pongo pygmaeus GN=SOD1 PE=2 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 6.844e-28 Identity = 60/115 (52.17%), Postives = 77/115 (66.96%), Query Frame = 3 Query: 327 LKG-TSNVEGVVTLTQED-GGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG S V+G++ Q++ GP V + GLT G HGFH+HE+GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ +GVA +I D+ ISL G + ++GR VVHE Sbjct: 9 LKGDNSPVKGIINFEQKERNGPVKVWGSIEGLTEGLHGFHVHEFGDNTVGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVASVSIEDSVISLSGDHCIIGRTLVVHE 123 The following BLAST results are available for this feature:
BLAST of FC920842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920842 ID=FC920842; Name=FC920842; organism=Citrus clementina; type=EST; length=666bpback to top |