FC920842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_DROWI (Superoxide dismutase [Cu-Zn] OS=Drosophila willistoni GN=Sod PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 6.844e-28 Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 3 Query: 342 NVEGVVTLTQEDGG-PTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 + +G V QED G P V VTGL G HGFH+HE+GD TNGC+S+G HFNP++ HGAP DE RH GDLGNI A+ +G I D++I+L G N+++GR VVH Sbjct: 12 DAKGTVFFEQEDNGAPVKVTGEVTGLGKGLHGFHVHEFGDNTNGCMSSGPHFNPHSKEHGAPGDENRHLGDLGNIEASGSGPTAVNITDSKITLVGANSIIGRTVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CAPHI (Superoxide dismutase [Cu-Zn] OS=Capra hircus GN=SOD1 PE=2 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 6.844e-28 Identity = 59/113 (52.21%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG V+G + + G V +TGLT G HGFH+H++GD T GC S G HFNP + HG PKDE RH GDLGN+ A+ NGVA IVD ISL G +++GR VVHE Sbjct: 9 LKGDGPVQGTIHF-EAKGDKVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHE 120
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_PAETN (Superoxide dismutase [Cu-Zn] OS=Paecilomyces tenuipes GN=SOD1 PE=3 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 1.167e-27 Identity = 58/114 (50.88%), Postives = 75/114 (65.79%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L+G + V G VT QE + PTT+ +TG P GFH+H +GD TNGC S G HFNP+ THGAP D RH GDLGN+ +A G A+ +I D+Q+ L GP++V+GR VVH Sbjct: 8 LRGDAKVGGTVTFEQESESAPTTITYDLTGNDPNAERGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDAARHVGDLGNVKTDAQGNAKGSIQDSQVKLIGPHSVIGRTVVVH 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_DROVI (Superoxide dismutase [Cu-Zn] OS=Drosophila virilis GN=Sod PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.167e-27 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 3 Query: 342 NVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 + +G V QE +G P V VTGL G HGFH+HE+GD TNGC+S+G HFNP HGAP DE RH GDLGNI+AN +G I D +I+L G N+++GR VVH Sbjct: 12 DAKGTVFFEQEGEGCPVKVTGEVTGLAKGQHGFHVHEFGDNTNGCMSSGPHFNPYQKEHGAPTDENRHLGDLGNIIANGDGPTPVNICDCKITLLGANSIIGRTVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC5_DICDI (Superoxide dismutase [Cu-Zn] 5 OS=Dictyostelium discoideum GN=sodE PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.396e-27 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 +KG V+G++ Q D P ++ ++GL G HGFH+HE+GDTTNGC+S GAHFNP HG+P DE RH GDLGNI +N + + I DN I+L G N+++GR+ VVH+ Sbjct: 7 IKG-DGVDGIINFKQNDNKSPVIISGVISGLKEGKHGFHVHEFGDTTNGCLSAGAHFNPFKKEHGSPNDENRHVGDLGNIESNKDKKSIINITDNIITLFGQNSIIGRSIVVHD 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CHYAM (Superoxide dismutase [Cu-Zn] OS=Chymomyza amoena GN=Sod PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 5.794e-27 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 3 Query: 342 NVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 + +G V QED P V +TGL G HGFH+HE+GD TNGC+S+G HFNP N HGAP DE RH GDLGNI A +G + I D++I+L G N++VGR VVH Sbjct: 12 DAKGTVYFEQEDACAPVKVCGEITGLNKGQHGFHVHEFGDNTNGCMSSGPHFNPLNKEHGAPTDENRHLGDLGNIEAPGDGPTKVCINDSKITLFGENSIVGRTVVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CORMI (Superoxide dismutase [Cu-Zn] OS=Cordyceps militaris GN=SOD1 PE=2 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 7.567e-27 Identity = 57/114 (50.00%), Postives = 73/114 (64.04%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L+G + V G VT QE + PTT+ +TG P GFH+H +GD TNGC S G HFNP+ THGAP D RH GDLGNI + G A+ ++ D+ + L GP++VVGR VVH Sbjct: 8 LRGDAKVAGTVTFEQESESAPTTITWDITGNDPNAERGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDAARHVGDLGNIKTDGQGNAKGSVQDSHVKLIGPHSVVGRTVVVH 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_NEUCR (Superoxide dismutase [Cu-Zn] OS=Neurospora crassa GN=sod-1 PE=1 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 1.291e-26 Identity = 57/114 (50.00%), Postives = 73/114 (64.04%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 ++G SNV+G V QE + PTT+ ++G P GFH+H +GD TNGC S G HFNP+ THG EVRH GDLGNI +A G A+ T+ DN + L GP +V+GR VVH Sbjct: 8 VRGDSNVKGTVIFEQESESAPTTITYDISGNDPNAKRGFHIHTFGDNTNGCTSAGPHFNPHGTTHGDRTAEVRHVGDLGNIETDAQGNAKGTVTDNLVKLIGPESVIGRTVVVH 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_BOTFU (Superoxide dismutase [Cu-Zn] OS=Botryotinia fuckeliana GN=sod1 PE=3 SV=3) HSP 1 Score: 118.627 bits (296), Expect = 2.875e-26 Identity = 56/114 (49.12%), Postives = 72/114 (63.16%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 ++G S + G VT Q E+ PTT+ +TG G H+H++GD TNGC S G HFNP+ THGAP DEVRH GDLGN +A G A ++ D+ I L GP +V+GR VVH Sbjct: 8 VRGDSKISGTVTFEQSEENSPTTITWNITGNDANAERGMHVHQFGDNTNGCTSAGPHFNPHGQTHGAPTDEVRHVGDLGNFKTDAQGNATGSVQDSHIKLIGPLSVIGRTVVVH 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC4_DICDI (Superoxide dismutase [Cu-Zn] 4 OS=Dictyostelium discoideum GN=sodD PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.875e-26 Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 3 Query: 345 VEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVA-NANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 V G + +QE +G P VN ++GL+ G HGFH+HE+GDT+NGC+S GAHFNP ++ HG P +RH GDLGNI + ++ VA I DN ISL G +++GR VVHE Sbjct: 13 VNGTIIFSQENEGSPVYVNGTISGLSGGLHGFHIHEFGDTSNGCLSAGAHFNPFHVEHGGPNSAIRHVGDLGNITSCPSSKVANVLIQDNVISLFGDLSIIGRTLVVHE 121 The following BLAST results are available for this feature:
BLAST of FC920842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920842 ID=FC920842; Name=FC920842; organism=Citrus clementina; type=EST; length=666bpback to top |