FC920842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_PIG (Superoxide dismutase [Cu-Zn] OS=Sus scrofa GN=SOD1 PE=1 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26 Identity = 52/113 (46.02%), Postives = 69/113 (61.06%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQEDGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHE 665 LKG V+G + + V + GL G HGFH+H++GD T GC S G HFNP + HG PKD+ RH GDLGN+ A +GVA I D+ I+L G ++++GR VVHE Sbjct: 9 LKGDGPVQGTIYFELKGEKTVLVTGTIKGLAEGDHGFHVHQFGDNTQGCTSAGPHFNPESKKHGGPKDQERHVGDLGNVTAGKDGVATVYIEDSVIALSGDHSIIGRTMVVHE 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_DROBS (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila busckii GN=Sod PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.093e-25 Identity = 56/108 (51.85%), Postives = 69/108 (63.89%), Query Frame = 3 Query: 342 NVEGVVTLTQE-DGGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 + +G V QE + P V VTGL G HGFH+HE+GD TNGC+S+G HFNP HGAP DE RH GDLGNI A +G I D +I+L G N+++GR VVH Sbjct: 4 DAKGTVFFEQESEKCPVKVTGEVTGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPQGKEHGAPTDENRHLGDLGNITATGDGPTAVDICDCKITLFGANSIIGRTVVVH 111
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_YARLI (Superoxide dismutase [Cu-Zn] OS=Yarrowia lipolytica GN=SOD1 PE=3 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25 Identity = 54/114 (47.37%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L+G S V G VT Q+ + GP TV + G P GFH+HE+GD TNGC S G HFNP HG P D RH GDLGN+ ++ GVA+ + D+ + L G N++VGR V+H Sbjct: 8 LRGDSKVSGTVTFEQDSESGPVTVTYDIKGNDPNAERGFHVHEFGDNTNGCTSAGPHFNPFKKNHGGPTDSERHVGDLGNVKTDSEGVAKGVLKDSLLKLTGDNSIVGRTVVIH 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_KLULA (Superoxide dismutase [Cu-Zn] OS=Kluyveromyces lactis GN=SOD1 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25 Identity = 56/114 (49.12%), Postives = 73/114 (64.04%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 LKG S+V G+V QE + T ++ +TG GFH+H +GD TNGC S G HFNP N HGAP+DE RH GDLGNI +A G+++ ++ D I L GP ++VGR VVH Sbjct: 8 LKGDSSVSGIVRFEQESEDQQTKISWEITGNDANALRGFHIHTFGDNTNGCTSAGPHFNPFNKNHGAPEDEERHVGDLGNIPTDAQGISKGSLTDKHIKLLGPLSIVGRTVVVH 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_EMENI (Superoxide dismutase [Cu-Zn] OS=Emericella nidulans GN=sodA PE=1 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25 Identity = 58/114 (50.88%), Postives = 71/114 (62.28%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQED-GGPTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L+G S V G VT Q D TTV+ +TG P GFH+H++GD TNGC S G HFNP THGAP+DEVRH GDLGN +A G ++ + D I L G +V+GR VVH Sbjct: 8 LRGDSKVSGTVTFEQADENSNTTVSWNITGNDPNAERGFHIHQFGDNTNGCTSAGPHFNPFGKTHGAPEDEVRHVGDLGNFKTDAEGNSKGSKTDKLIKLIGAESVLGRTLVVH 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CERCA (Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata GN=Sod PE=3 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.864e-25 Identity = 56/108 (51.85%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 342 NVEGVVTLTQEDG-GPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 +V+G V Q+D P V V GL G HGFH+HE+GD TNGC S G HFNP +HGAP D RH GDLGNI A+ +G + I D I+L G N++VGR VVH Sbjct: 12 DVKGTVHFEQQDAKSPVLVTGEVNGLAKGLHGFHVHEFGDNTNGCTSAGPHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISDKLITLFGENSIVGRTIVVH 119
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODE_DIRIM (Extracellular superoxide dismutase [Cu-Zn] OS=Dirofilaria immitis PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25 Identity = 52/110 (47.27%), Postives = 69/110 (62.73%), Query Frame = 3 Query: 336 TSNVEGVVTLTQED-GGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 + V G++ Q + TT+ + GLTPG HGFH+H+YG NGC S AH+NP THG P + ++H GDL NI A A+GVA I+ N I L GP +V+GR+ VVH Sbjct: 48 SDTVNGIIYFQQNNRASATTIYGTINGLTPGLHGFHIHQYGIKANGCTSAAAHYNPFEKTHGRPTNNIKHIGDLRNIKAGADGVANVNIISNHIQLSGPLSVIGRSLVVH 157
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_CLAPU (Superoxide dismutase [Cu-Zn] OS=Claviceps purpurea GN=SOD1 PE=3 SV=3) HSP 1 Score: 115.546 bits (288), Expect = 2.434e-25 Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L+G + V G V QE + PTT+ +TG GFH+H +GD TNGC S G HFNP+ THGAP DE RH GDLGN+ + G A+ ++ D + L GP++V+GR V+H Sbjct: 8 LRGDAKVGGTVVFEQESESAPTTITWDITGNDANAKRGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDEARHVGDLGNLETDGQGNAKGSVKDEHVKLIGPHSVIGRTVVIH 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_COLGL (Superoxide dismutase [Cu-Zn] OS=Colletotrichum gloeosporioides GN=SOD1 PE=3 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 3.179e-25 Identity = 53/114 (46.49%), Postives = 72/114 (63.16%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQE-DGGPTTVNVRVTGLTPGP-HGFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 ++G S V G + QE + PT + ++G G H+H +GD TNGC S G HFNP+N THGAP+D RH GDLGNI +ANG ++ T+ D+ + L GP +V+GR VVH Sbjct: 8 VRGDSKVTGSIVFEQESESAPTKITWDISGNDANAKRGMHIHTFGDNTNGCTSAGPHFNPHNKTHGAPEDSNRHVGDLGNIETDANGNSKGTVTDSHVKLIGPESVIGRTIVVH 121
BLAST of FC920842 vs. ExPASy Swiss-Prot
Match: SODC_HUMLT (Superoxide dismutase [Cu-Zn] OS=Humicola lutea PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.152e-25 Identity = 55/114 (48.25%), Postives = 71/114 (62.28%), Query Frame = 3 Query: 327 LKGTSNVEGVVTLTQ-EDGGPTTVNVRVTGLTPGPH-GFHLHEYGDTTNGCISTGAHFNPNNMTHGAPKDEVRHAGDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVH 662 L+G S + G VT Q + PTTV+ +TG P G H+H++GD TNGC S G H+NP THGAP DEVRH GDLGNI +A G A ++ D I + G +++GR VVH Sbjct: 8 LRGDSKITGTVTFEQANESAPTTVSWNITGHDPNAERGMHIHQFGDNTNGCTSAGPHYNPFKKTHGAPTDEVRHVGDLGNIKTDAEGNAVGSVQDKLIKVIGAESILGRTIVVH 121 The following BLAST results are available for this feature:
BLAST of FC920842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920842 ID=FC920842; Name=FC920842; organism=Citrus clementina; type=EST; length=666bpback to top |