FC920843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_RICBR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia bellii (strain RML369-C) GN=pdhB PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 4.159e-68 Identity = 122/182 (67.03%), Postives = 154/182 (84.62%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLYGESFPVS 556 Q+ VREAL A+ EEM D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA+DHI+NSAAK++YMS GQ+ PIVFR PNGAA+ V AQHSQ YAA Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FL NE+LYG SF +S Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAMDHIVNSAAKTHYMSGGQVRCPIVFRGPNGAASRVAAQHSQNYAACYSYIPGLKVVAPYSAEDHKGLMITAIRDDNPVIFLENEILYGHSFDIS 183
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_RICFE (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia felis GN=pdhB PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 3.521e-67 Identity = 122/181 (67.40%), Postives = 150/181 (82.87%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLYGESFPV 553 Q+ VREAL A+ EEM D KVF+MGEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ PIVFR PNGAA+ V AQHSQ Y A Y+ VPGLKV++PYS+ED +GL+ AIRD +PV+FL NE+LYG SF V Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVMGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQAKCPIVFRGPNGAASRVAAQHSQNYTACYSHVPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDV 182
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_RICCN (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia conorii GN=pdhB PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 3.521e-67 Identity = 121/181 (66.85%), Postives = 151/181 (83.43%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLYGESFPV 553 Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++GP+RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFR PNGAA+ V AQHSQ Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PVVFL NE+LYG SF V Sbjct: 2 QITVREALRDAMQEEMIRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGPKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVVFLENEILYGHSFDV 182
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 3.521e-67 Identity = 123/194 (63.40%), Postives = 151/194 (77.84%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLYGESFPVSAEDLDSSFCPPI 592 Q+ VR+A+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G VPIVFR PNGA+AGV AQHSQC+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV L NEL+YG F E F PI Sbjct: 32 QVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPI 225
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3) HSP 1 Score: 254.218 bits (648), Expect = 3.521e-67 Identity = 123/194 (63.40%), Postives = 151/194 (77.84%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLYGESFPVSAEDLDSSFCPPI 592 Q+ VR+A+N +DEE+ D KVFL+GEEV +Y GAYK+S+GL +KYG +R++DTPI+E GF GI VGAA GL+P+ EFMTFNFSMQAID +INSAAK+ YMS G VPIVFR PNGA+AGV AQHSQC+AAWY PGLKV+SP++SEDA+GL+K+AIRD +PVV L NEL+YG F E F PI Sbjct: 32 QVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPI 225
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_ZYMMO (Pyruvate dehydrogenase E1 component subunit beta OS=Zymomonas mobilis GN=pdhB PE=3 SV=2) HSP 1 Score: 250.751 bits (639), Expect = 3.893e-66 Identity = 124/185 (67.03%), Postives = 150/185 (81.08%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLYGESFPVSAED 565 Q +REAL A+ EEM D +VF+MGEEV EYQGAYK+++GLL+++G RV+DTPI+E GF+GIGVGAA GL+PV+EFMT NFSMQAIDHIINSAAK++YMS GQ+ PIVFR PNGAA VGAQH+Q + WYA+VPGL VL+PY + DA+GLLKAAIR DPVVFL ELLYG++F V D Sbjct: 138 QQTLREALRDAMAEEMRRDDRVFVMGEEVAEYQGAYKVTQGLLQEFGARRVVDTPISEYGFSGIGVGAAMEGLRPVIEFMTMNFSMQAIDHIINSAAKTHYMSGGQVRCPIVFRGPNGAAPRVGAQHTQNFGPWYAAVPGLVVLAPYDAIDAKGLLKAAIRSDDPVVFLECELLYGKTFDVPKMD 322
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_RICTY (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia typhi GN=pdhB PE=3 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 3.893e-66 Identity = 119/181 (65.75%), Postives = 150/181 (82.87%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLYGESFPV 553 Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFR PNGAA+ V AQHSQ Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FL NE+LYG SF V Sbjct: 2 QITVREALRDAMQEEMLRDDKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDV 182
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_RICPR (Pyruvate dehydrogenase E1 component subunit beta OS=Rickettsia prowazekii GN=pdhB PE=3 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 3.893e-66 Identity = 119/181 (65.75%), Postives = 150/181 (82.87%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLYGESFPV 553 Q+ VREAL A+ EEM D KVF++GEEV EYQGAYK+++GLLE++G +RV+DTPITE GF G+ VGAA+ GL+P+VEFMTFNF+MQA DHI+NSAAK++YMS GQ+ PIVFR PNGAA+ V AQHSQ Y A Y+ +PGLKV++PYS+ED +GL+ AIRD +PV+FL NE+LYG SF V Sbjct: 2 QITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDV 182
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_ASCSU (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Ascaris suum PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 3.084e-63 Identity = 119/190 (62.63%), Postives = 142/190 (74.74%), Query Frame = 2 Query: 20 VREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLYGESFPVSAEDLDSSFCPP 589 VR+ALN+ALDEE+ D +VFL+GEEV +Y GAYKISKGL +KYG R+ DTPITE G+ VGAA GL+P+ EFM+ NFSMQ IDHIINSAAK++YMS G+ VPIVFR NGAA GV QHSQ + AW+ PG+KV+ PY EDARGLLKAA+RD +PV+ L NE+LYG FPVS E F P Sbjct: 36 VRDALNAALDEEIKRDDRVFLIGEEVAQYDGAYKISKGLWKKYGDGRIWDTPITEMAIAGLSVGAAMNGLRPICEFMSMNFSMQGIDHIINSAAKAHYMSAGRFHVPIVFRGANGAAVGVAQQHSQDFTAWFMHCPGVKVVVPYDCEDARGLLKAAVRDDNPVICLENEILYGMKFPVSPEAQSPDFVLP 225
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_CYAME (Pyruvate dehydrogenase E1 component subunit beta OS=Cyanidioschyzon merolae GN=pdhB PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.001e-42 Identity = 87/175 (49.71%), Postives = 122/175 (69.71%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 ++ + EAL A+DEEM+ D +VF++GE+VG Y G+YK++K L KYG RVLDTPI E FTG+ +GAA GLKPVVE M +F + A + I N+A +Y S G S+P+V R P G + A+HSQ A++ +VPGLK+++ + +A+GLLKAAIRD +PV+FL + LLY Sbjct: 4 KLFMYEALREAIDEEMARDKRVFVLGEDVGHYGGSYKVTKQLHTKYGDLRVLDTPIAENSFTGMAIGAAMTGLKPVVEGMNLSFLLLAFNQISNNAGMLHYTSGGNWSIPLVIRGPGGIGKQLSAEHSQRIEAYFQAVPGLKIVACSTPYNAKGLLKAAIRDNNPVLFLEHVLLY 178 The following BLAST results are available for this feature:
BLAST of FC920843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920843 ID=FC920843; Name=FC920843; organism=Citrus clementina; type=EST; length=594bpback to top |