FC920843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ACOB_BACSU (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta OS=Bacillus subtilis GN=acoB PE=3 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 5.871e-30 Identity = 73/182 (40.11%), Postives = 100/182 (54.95%), Query Frame = 2 Query: 26 EALNSALDEEMSADPKVFLMGEEVG------------EYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 +A+N A+ M D V L+GE+V + G ++KGL++++G RVLDTPI+EAG+ G + AA GL+P+ E M +F D +IN AK YM G+ VPI R GA AQHSQ + S+PGLK + P + DA+GLL AAI D DPV F ++ Y Sbjct: 9 DAINEAMKLAMRKDENVLLIGEDVAGGAAVDHLQDDEAWGGVLGVTKGLVQEFGRTRVLDTPISEAGYMGAAMAAASTGLRPIAELMFNDFIGTCFDQVINQGAKFRYMFGGKAQVPITVRTTYGAGFRAAAQHSQSLYGLFTSIPGLKTVVPSNPYDAKGLLLAAIEDNDPVFFFEDKTSY 190
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_LEIXX (Pyruvate dehydrogenase E1 component subunit beta OS=Leifsonia xyli subsp. xyli GN=pdhB PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.806e-29 Identity = 61/170 (35.88%), Postives = 98/170 (57.65%), Query Frame = 2 Query: 5 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVF 514 V+ + + +ALN+ L + + ADPKV ++GE+VG G +++++GL ++G RV+DTP+ EAG G +G A G +PVVE F D I AK G +S+P+V R P+G G H + A++A GL++++P + DA +++ AI DPV+F Sbjct: 14 VQSLPMVKALNAGLRQALVADPKVLILGEDVGPLGGVFRVTEGLQSEFGASRVVDTPLAEAGIVGTAIGLAMRGYRPVVEIQFNGFVFPGFDQITTQLAKMANRHSGAVSMPVVIRIPHGGHIGAVEHHQEAPEAYFAHTAGLRIVAPSTPHDAYWMIQEAIASDDPVIF 183
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODBB_DICDI (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Dictyostelium discoideum GN=bkdB PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.970e-29 Identity = 67/177 (37.85%), Postives = 101/177 (57.06%), Query Frame = 2 Query: 8 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISV-PIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 ++M + +A+N+ +D M D K + GE+VG + G ++ + GL +KYG RV +TP+ E G G +G A G P+ E ++ A D I+N AAK Y S GQ + R P GA G HSQ +++ PGLKV+ P + +A+GLL A+IR+ DPV+F +L+Y Sbjct: 47 QKMNLFQAINNGMDIAMQKDSKAVVFGEDVG-FGGVFRCTVGLRDKYGASRVFNTPLCEQGIAGFAIGLAAQGATPIAEIQFADYIFPAFDQIVNEAAKYRYRSGGQFDCGSLTIRSPYGAVGHGGHYHSQSPESYFGHTPGLKVVIPSTPIEAKGLLLASIREKDPVIFFEPKLMY 222
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_BACSU (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus subtilis GN=pdhB PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 1.889e-28 Identity = 64/175 (36.57%), Postives = 98/175 (56.00%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 QM + +A+ AL E+ D V + GE+VG G ++ ++GL +++G +RV DTP+ E+G G+ +G G +PV+E F F + +D + A+ Y S G+ + P+ R P G H+ A PG+KV+ P + DA+GLL +AIRD DPVVFL + LY Sbjct: 3 QMTMIQAITDALRTELKNDENVLVFGEDVGVNGGVFRATEGLQKEFGEDRVFDTPLAESGIGGLALGLGLNGFRPVMEIQFFGFVYEVMDSVSGQMARMRYRSGGRWTSPVTIRSPFGGGVHTPELHADSLEGLVAQQPGIKVVIPSTPYDAKGLLISAIRDNDPVVFLEHMKLY 177
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_STAAW (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MW2) GN=pdhB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27 Identity = 63/175 (36.00%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G G+ +G A G +PV+E F + D I A++ + S G + P+ R P G H+ A PGLKV+ P DA+GLL ++IR DPVV+L + LY Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY 177
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_STAAU (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus GN=pdhB PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27 Identity = 63/175 (36.00%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G G+ +G A G +PV+E F + D I A++ + S G + P+ R P G H+ A PGLKV+ P DA+GLL ++IR DPVV+L + LY Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY 177
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_STAAS (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MSSA476) GN=pdhB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27 Identity = 63/175 (36.00%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G G+ +G A G +PV+E F + D I A++ + S G + P+ R P G H+ A PGLKV+ P DA+GLL ++IR DPVV+L + LY Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY 177
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_STAAR (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MRSA252) GN=pdhB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27 Identity = 63/175 (36.00%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G G+ +G A G +PV+E F + D I A++ + S G + P+ R P G H+ A PGLKV+ P DA+GLL ++IR DPVV+L + LY Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY 177
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_STAAN (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain N315) GN=pdhB PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27 Identity = 63/175 (36.00%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G G+ +G A G +PV+E F + D I A++ + S G + P+ R P G H+ A PGLKV+ P DA+GLL ++IR DPVV+L + LY Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY 177
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_STAAM (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhB PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27 Identity = 63/175 (36.00%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G G+ +G A G +PV+E F + D I A++ + S G + P+ R P G H+ A PGLKV+ P DA+GLL ++IR DPVV+L + LY Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY 177 The following BLAST results are available for this feature:
BLAST of FC920843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920843 ID=FC920843; Name=FC920843; organism=Citrus clementina; type=EST; length=594bpback to top |