FC920843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_STAAC (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain COL) GN=pdhB PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.599e-27 Identity = 63/175 (36.00%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G G+ +G A G +PV+E F + D I A++ + S G + P+ R P G H+ A PGLKV+ P DA+GLL ++IR DPVV+L + LY Sbjct: 3 QMTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGTKTAPVTIRGPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLY 177
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27 Identity = 61/175 (34.86%), Postives = 96/175 (54.86%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G G+ +G A G +PV+E F + D + A++ + S G P+ R P G H+ A PGLKV+ P DA+GLL ++I+ DPVV+L + LY Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLY 177
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27 Identity = 61/175 (34.86%), Postives = 96/175 (54.86%), Query Frame = 2 Query: 11 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISVPIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 QM + +A+N AL E+ D V + GE+VG G +++++GL +++G +RV DTP+ E+G G+ +G A G +PV+E F + D + A++ + S G P+ R P G H+ A PGLKV+ P DA+GLL ++I+ DPVV+L + LY Sbjct: 3 QMTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGTKPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLY 177
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODBB_BOVIN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Bos taurus GN=BCKDHB PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 4.354e-25 Identity = 62/177 (35.03%), Postives = 96/177 (54.24%), Query Frame = 2 Query: 8 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISV-PIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 ++M + +A+ SALD ++ DP + GE+V + G ++ + GL +KYG +RV +TP+ E G G G+G A G + E ++ A D I+N AAK Y S + + R P G HSQ A++A PG+KV+ P S A+GLL + I D +P +F ++LY Sbjct: 69 QKMNLFQAVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVVPRSPFQAKGLLLSCIEDKNPCIFFEPKILY 244
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODBB_RAT (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Rattus norvegicus GN=Bckdhb PE=1 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 7.427e-25 Identity = 61/177 (34.46%), Postives = 96/177 (54.24%), Query Frame = 2 Query: 8 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISV-PIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 ++M + +++ SALD ++ DP + GE+V + G ++ + GL +KYG +RV +TP+ E G G G+G A G + E ++ A D I+N AAK Y S + + R P G HSQ A++A PG+KV+ P S A+GLL + I D +P +F ++LY Sbjct: 67 QKMNLFQSITSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILY 242
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODBB_MOUSE (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Mus musculus GN=Bckdhb PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 7.427e-25 Identity = 61/177 (34.46%), Postives = 96/177 (54.24%), Query Frame = 2 Query: 8 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISV-PIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY 535 ++M + +++ SALD ++ DP + GE+V + G ++ + GL +KYG +RV +TP+ E G G G+G A G + E ++ A D I+N AAK Y S + + R P G HSQ A++A PG+KV+ P S A+GLL + I D +P +F ++LY Sbjct: 67 QKMNLFQSITSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRAPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILY 242
BLAST of FC920843 vs. ExPASy Swiss-Prot
Match: ODBB_HUMAN (2-oxoisovalerate dehydrogenase subunit beta, mitochondrial OS=Homo sapiens GN=BCKDHB PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 7.427e-25 Identity = 64/194 (32.99%), Postives = 102/194 (52.58%), Query Frame = 2 Query: 8 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSPGQISV-PIVFRRPNGAAAGVGAQHSQCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL*NELLY---GESFPVSAEDLDSS 577 ++M + +++ SALD ++ DP + GE+V + G ++ + GL +KYG +RV +TP+ E G G G+G A G + E ++ A D I+N AAK Y S + + R P G HSQ A++A PG+KV+ P S A+GLL + I D +P +F ++LY E P+ ++ S Sbjct: 69 QKMNLFQSVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHGALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFFEPKILYRAAAEEVPIEPYNIPLS 261 The following BLAST results are available for this feature:
BLAST of FC920843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920843 ID=FC920843; Name=FC920843; organism=Citrus clementina; type=EST; length=594bpback to top |