FC920845

Overview
NameFC920845
Unique NameFC920845
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9369 contig Ccv1_Contig9369:64..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920845 vs. ExPASy Swiss-Prot
Match: EXG_PICAN (Glucan 1,3-beta-glucosidase OS=Pichia angusta PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 75/230 (32.61%), Postives = 114/230 (49.57%), Query Frame = 1
Query:    4 SYITDDDFKFLSSNGINAVRIPVGWWIANDPAPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAVPGSQNGNEHSATRDGFQEWGDSNIAD-TVAVIDFLAARYCN---RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFAS--GLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWT 675
            ++I ++DFK +++ G+N VRIP+G+W A   A   P+V G  + LD A +W  KYG+K  VDLH  PGSQNG ++S  R        +   D TV V+D L ++Y        +  IEL+NEPL   +  D L  +Y  GY  VR   +   +I    L       +L+      +  V++D H+Y +F       ++ Q+ID  +   A   G    +    +  GEWT
Sbjct:  102 TWIKEEDFKGMANAGLNFVRIPIGYW-AFQLAEGDPYVQGQQEYLDKALEWCAKYGLKAWVDLHGAPGSQNGFDNSGKRGEIGWQNTTGYVDLTVQVLDQLTSKYGGSNYSDVIIGIELLNEPLGSYLDFDQLVDFYNKGYQLVRNNGNAPVIIHDAYLPDHTFDNVLNTEQDPNVWEVIVDHHHYQVFDEG----SLSQSID-EHVSTACGWGQSENTEYHYSLCGEWT 325          
BLAST of FC920845 vs. ExPASy Swiss-Prot
Match: SPR1_YEAST (Sporulation-specific glucan 1,3-beta-glucosidase OS=Saccharomyces cerevisiae GN=SPR1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.015e-24
Identity = 65/191 (34.03%), Postives = 107/191 (56.02%), Query Frame = 1
Query:    4 SYITDDDFKFLSSNGINAVRIPVGWWIANDPAPPKPFVGGSSKV-LDNAFDWAEKYGVKVIVDLHAVPGSQNGNEHSATRDGFQEWGDSNIADTVAVIDFLAARYCN---RPSLAAIELINEPLAPGVALDTLKS-YYKAGYDAVR-KYTSTAYVIMSNRLGPADHKE-LLSFASGLSRVVIDVHYYNLFS 555
            ++  ++DF  ++S G N VRIP+G+W A       P+V    +  LD A DWA KYG+KV +DLH   GSQNG ++S  RD ++   D N++ T+  + ++ ++Y       ++  IEL+NEPL P + ++ LK+   K  YD +R K  S   +++ +   P  + +  L+       V+ID H+Y +FS
Sbjct:  113 TFYKEEDFAKIASQGFNLVRIPIGYW-AFTTLSHDPYVTAEQEYFLDRAIDWARKYGLKVWIDLHGAAGSQNGFDNSGLRDSYKFLEDENLSATMKALTYILSKYSTDVYLDTVIGIELLNEPLGPVIDMERLKNLLLKPAYDYLRNKINSNQIIVIHDAFQPYHYWDGFLNDEKNEYGVIIDHHHYQVFS 302          
BLAST of FC920845 vs. ExPASy Swiss-Prot
Match: SPR1_SACBA (Sporulation-specific glucan 1,3-beta-glucosidase OS=Saccharomyces bayanus GN=SPR1 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.143e-24
Identity = 74/233 (31.76%), Postives = 124/233 (53.22%), Query Frame = 1
Query:    4 SYITDDDFKFLSSNGINAVRIPVGWWIANDPAPPKPFVGGSSK-VLDNAFDWAEKYGVKVIVDLHAVPGSQNGNEHSATRDGFQEWGDSNIADTVAVIDFLAARYCN---RPSLAAIELINEPLAPGVALDTLKS-YYKAGYDAVR-KYTSTAYVIMSNRLGPADHKELLSFASGLSR---VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWT 675
            ++  ++DF  ++S G N VRIPVG+W A       P+V G  +  LD A DWA KYG+KV +DLH   GSQNG ++S  RD ++   +  ++ T+  + ++ ++Y       ++  IEL+NEPL P   ++ LK+ + K  YD +R K  S   ++M +   P ++ +  +F +G      V++D H+Y +FS      N+ + I     + A   G  T S    +  GE++
Sbjct:  113 TFYKEEDFAKIASQGFNMVRIPVGYW-AFTTLSHDPYVTGEQEYFLDKAVDWARKYGLKVWIDLHGAAGSQNGFDNSGLRDSYKFLDEEYLSATMKALTYILSKYSTDIYLDTVIGIELLNEPLGPVFDMERLKNLFLKPAYDYLRNKIMSKQIIVMHDAFQPYNYWD--NFLNGDKEEYGVILDHHHYQVFSPIELARNMNERI-----KIACQWGVGTLSEKHWSVAGEFS 337          
BLAST of FC920845 vs. ExPASy Swiss-Prot
Match: EXG1_YEAST (Glucan 1,3-beta-glucosidase I/II OS=Saccharomyces cerevisiae GN=EXG1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.354e-23
Identity = 67/203 (33.00%), Postives = 111/203 (54.68%), Query Frame = 1
Query:    4 SYITDDDFKFLSSNGINAVRIPVGWWIANDPAPPKPFVGG-SSKVLDNAFDWAEKYGVKVIVDLHAVPGSQNGNEHSATRDGFQEWGDSNIADTVAVIDFLAARYCNR---PSLAAIELINEPLAPGVALDTLKSYYKA-GYDAVR-KYTSTAYVIMSNRLGPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI 591
            ++  + DF  ++S G N VRIP+G+W A       P+V G     LD A  WA    +KV VDLH   GSQNG ++S  RD ++   DSN+A T  V++++  +Y       ++  IELINEPL P + +D +K+ Y A  Y+ +R    S   +I+ +   P ++  + ++   G   V ID H+Y +F+++    ++ ++I
Sbjct:  112 TFYQEQDFANIASQGFNLVRIPIGYW-AFQTLDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTTNVLNYILKKYSAEEYLDTVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHI 313          
BLAST of FC920845 vs. ExPASy Swiss-Prot
Match: EXG_SACBA (Glucan 1,3-beta-glucosidase OS=Saccharomyces bayanus GN=EXG1 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.072e-21
Identity = 64/196 (32.65%), Postives = 102/196 (52.04%), Query Frame = 1
Query:    4 SYITDDDFKFLSSNGINAVRIPVGWW----IANDPAPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAVPGSQNGNEHSATRDGFQEWGDSNIADTVAVIDFLAARYCNR---PSLAAIELINEPLAPGVALDTLKS-YYKAGYDAVRK-YTSTAYVIMSNRLGPADH-KELLSFASGLSRVVIDVHYYNLFSNN 561
            ++  + DF  ++S G N VRIP+G+W    + NDP       G     LD A  WA    +KV VDLH   GSQNG ++S  RD ++   DSN+A T   ++++  +Y       ++  IELINEPL P + +D +K+ Y    Y+ +R    S   +IM +     ++  + ++   G   V ID H+Y +F ++
Sbjct:  112 TFYQEQDFANIASQGFNLVRIPIGYWAFATLDNDPY----VTGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYEFLEDSNLAVTTKALNYILKKYSAEEYLDTVIGIELINEPLGPVLDMDKMKNDYLLPAYEYLRNTIESNQIIIMHDAFQQFNYWDDFMTETDGYWGVTIDHHHYQVFDSS 303          
BLAST of FC920845 vs. ExPASy Swiss-Prot
Match: EXG1_HANAN (Glucan 1,3-beta-glucosidase 1 OS=Hansenula anomala GN=EXG1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19
Identity = 74/253 (29.25%), Postives = 119/253 (47.04%), Query Frame = 1
Query:    4 SYITDDDFKFLSSNGINAVRIPVGWWIANDPAPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAVPGSQNGNEHSATRDGFQEWGD--SNIADTVAVIDFLAARYCNR---PSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPAD------------------HKELLSFASGLSR-----VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWT 675
            +Y T+ DFK +   G+N VRIP+G+W A       P+V G    LD A +WA++  +KV +DLH VPGSQNG ++S  R G   W D   NI  +   ++++  +Y       ++  IE++NEP    +   D L  YY + YD   K+ S  + ++     P                    + ELL    G+ +     +V+D H+Y +FS   + L+  +N    + +   +  A      P + VGEW+
Sbjct:   98 TYFTESDFKDIKDYGLNLVRIPIGYW-AFYLLEDDPYVQGQEPYLDKALEWAKQNDLKVWIDLHGVPGSQNGFDNSGKR-GNVTWQDDEENIELSYKTLNYIFGKYGGENLTDTVIGIEIVNEPFHSKLNETDMLDFYYNSYYDFRIKHNSRNFFLIQEAFEPIGFWNTHLNNDYTNVSKPFLNDELLE--EGVPKNYFHDIVLDHHHYEVFS--VDQLDKSENARIQDIKNYGESVAKEQEYHP-SLVGEWS 343          
BLAST of FC920845 vs. ExPASy Swiss-Prot
Match: EXG2_YEAST (Glucan 1,3-beta-glucosidase 2 OS=Saccharomyces cerevisiae GN=EXG2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 59/216 (27.31%), Postives = 104/216 (48.15%), Query Frame = 1
Query:    4 SYITDDDFKFLSSNGINAVRIPVGWWIANDPAPPKPFV------------GGSSKVLDNAFDWAEKYGVKVIVDLHAVPGSQNGNEHSATRDGFQEWGDSNIAD----TVAVIDFLAARYCN---RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRK----YTSTAYVIMSNRLGPAD-HKELLSFASGLSRVVIDVHYYNLFSNNFNGLNV 579
            ++IT+DDF+ + +NG N VRIP+G+W          ++            G   K L+NA +WA+KY + V +DLH  PGSQNG ++S  R  + + G   + +    T+A+   +   + N   +  +  I+++NEPL   + +  +   Y   +D ++K      +T +VI     G    + EL      +S      HY+NL   N++  ++
Sbjct:  118 TWITEDDFEQIKTNGFNLVRIPIGYWAWKQNTDKNLYIDNITFNDPYVSDGLQLKYLNNALEWAQKYELNVWLDLHGAPGSQNGFDNSGERILYGDLGWLRLNNTKELTLAIWRDMFQTFLNKGDKSPVVGIQIVNEPLGGKIDVSDITEMYYEAFDLLKKNQNSSDNTTFVIHDGFQGIGHWNLELNPTYQNVSH-----HYFNLTGANYSSQDI 328          
The following BLAST results are available for this feature:
BLAST of FC920845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
EXG_PICAN6.075e-2532.61Glucan 1,3-beta-glucosidase OS=Pichia angusta PE=3... [more]
SPR1_YEAST3.015e-2434.03Sporulation-specific glucan 1,3-beta-glucosidase O... [more]
SPR1_SACBA5.143e-2431.76Sporulation-specific glucan 1,3-beta-glucosidase O... [more]
EXG1_YEAST4.354e-2333.00Glucan 1,3-beta-glucosidase I/II OS=Saccharomyces ... [more]
EXG_SACBA1.072e-2132.65Glucan 1,3-beta-glucosidase OS=Saccharomyces bayan... [more]
EXG1_HANAN6.506e-1929.25Glucan 1,3-beta-glucosidase 1 OS=Hansenula anomala... [more]
EXG2_YEAST3.022e-1627.31Glucan 1,3-beta-glucosidase 2 OS=Saccharomyces cer... [more]

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Properties
Property NameValue
Genbank descriptionC32013G03EF RVDevelop1 Citrus clementina cDNA clone C32013G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920845 ID=FC920845; Name=FC920845; organism=Citrus clementina; type=EST; length=704bp
GACAGTTACATCACTGATGACGATTTCAAATTCCTGTCATCAAATGGTAT
CAATGCTGTGAGAATTCCAGTTGGGTGGTGGATTGCAAACGATCCAGCGC
CGCCAAAGCCTTTTGTAGGGGGCTCATCAAAAGTCTTAGACAATGCTTTC
GATTGGGCAGAAAAATATGGGGTGAAGGTTATTGTTGATTTGCATGCGGT
CCCAGGTTCGCAGAACGGCAATGAACACAGCGCGACAAGAGATGGATTCC
AGGAATGGGGAGATTCTAACATAGCAGATACTGTTGCTGTAATTGACTTT
CTGGCTGCAAGATATTGTAATAGGCCAAGCCTTGCTGCCATTGAGTTGAT
TAATGAGCCGCTTGCTCCTGGGGTCGCTTTGGACACTTTGAAAAGTTATT
ACAAGGCAGGTTATGATGCTGTGAGGAAATACACTTCAACTGCTTACGTG
ATCATGTCCAATCGTCTGGGACCTGCTGATCATAAGGAGCTACTCTCATT
TGCAAGTGGCCTTAGTCGCGTAGTCATTGATGTGCATTACTACAATCTGT
TCAGCAACAATTTCAATGGCTTGAATGTGCAACAGAACATTGATTATGTC
AACAACCAACGAGCTTCTGATCTTGGCGCCGTCACTACTTCTAATGGCCC
TCTAACTTTTGTTGGGGAATGGACATGTGAATGGAATGTAAAGGACGCAT
NCAA
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