FC920847

Overview
NameFC920847
Unique NameFC920847
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920847 vs. ExPASy Swiss-Prot
Match: THS1_VITVI (Stilbene synthase 1 OS=Vitis vinifera GN=VINST1 PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 8.691e-87
Identity = 134/180 (74.44%), Postives = 161/180 (89.44%), Query Frame = 1
Query:   61 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 600
            MA+V+E RNAQRA GPAT+LAIGTATP H V Q+DY DYYFR+TKSEHMTELK+KF R+CDKSMIKKRY++LTEE+L+E+PN+ AYMAPSL+ RQ+I+  EVP+LG++AA KA+KEWGQPKSKITHL+FCTTSGV+MPGADY+L  L+GL  SV+R M+Y QGC+AGGTVLR AKDLAEN
Sbjct:    1 MASVEEFRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPRLGRDAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAEN 180          

HSP 2 Score: 53.9138 bits (128), Expect = 8.691e-87
Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 3
Query:  606 GARVLVVCSEITAVTFRGPADTHLDSLVGQA 698
            GARVLVVCSEIT VTFRGP++  LDSLVGQA
Sbjct:  183 GARVLVVCSEITVVTFRGPSEDALDSLVGQA 213          
BLAST of FC920847 vs. ExPASy Swiss-Prot
Match: THS3_VITVI (Stilbene synthase 3 (Fragment) OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.617e-85
Identity = 134/177 (75.71%), Postives = 158/177 (89.27%), Query Frame = 1
Query:   70 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 600
            V+EIRNAQRA GPAT+LAIGTATP H V Q+DY DYYFR+TKSE M+ELK+KF R+CDKSMIKKRY++LTEE+L+E+PN+ AYMAPSL+ RQ+I+  EVPKLGKEAA KA+KEWGQPKSKITHL+FCTTSGV+MPGADY+L  L+GL  SV+R M+Y QGC+AGGTVLR AKDLAEN
Sbjct:    1 VEEIRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFRVTKSEPMSELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAEN 177          

HSP 2 Score: 53.9138 bits (128), Expect = 1.617e-85
Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 3
Query:  606 GARVLVVCSEITAVTFRGPADTHLDSLVGQA 698
            GARVLVVCSEIT VTFRGP++  LDSLVGQA
Sbjct:  180 GARVLVVCSEITVVTFRGPSEDALDSLVGQA 210          
BLAST of FC920847 vs. ExPASy Swiss-Prot
Match: THS3_ARAHY (Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 3.590e-85
Identity = 132/180 (73.33%), Postives = 157/180 (87.22%), Query Frame = 1
Query:   61 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 600
            M +V  IR  QRA+GPATVLAIGTA P + ++Q+ Y DYYFR+T SEHMT+LK+KF+R+C+++ IK R+MYLTEEILKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L  L+GL P VKR+MMY QGCFAGGTVLRLAKDLAEN
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCIDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNRHMYLTEEILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPCVKRYMMYHQGCFAGGTVLRLAKDLAEN 180          

HSP 2 Score: 53.9138 bits (128), Expect = 3.590e-85
Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 3
Query:  600 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQA 698
            +K ARVL+VCSE TAVTFRGP++T +DSLVGQA
Sbjct:  181 NKDARVLIVCSENTAVTFRGPSETDMDSLVGQA 213          
BLAST of FC920847 vs. ExPASy Swiss-Prot
Match: THS1_ARAHY (Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 4.682e-85
Identity = 133/180 (73.89%), Postives = 157/180 (87.22%), Query Frame = 1
Query:   61 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 600
            M +V  IR  QRA+GPATVLAIGTA P + V+Q+ Y DYYFR+T  EHMT+LK+KF+R+C+++ IK R+MYLTEEILKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L  L+GL PSVKR+MMY QGCFAGGTVLRLAKDLAEN
Sbjct:    1 MVSVSGIRKVQRAEGPATVLAIGTANPPNCVDQSTYADYYFRVTNGEHMTDLKKKFQRICERTQIKNRHMYLTEEILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAEN 180          

HSP 2 Score: 52.7582 bits (125), Expect = 4.682e-85
Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 3
Query:  600 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQA 698
            +K ARVL+VCSE TAVTFRGP +T +DSLVGQA
Sbjct:  181 NKDARVLIVCSENTAVTFRGPNETDMDSLVGQA 213          
BLAST of FC920847 vs. ExPASy Swiss-Prot
Match: CHS2_HORVU (Chalcone synthase 2 OS=Hordeum vulgare GN=CHS2 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.966e-85
Identity = 135/177 (76.27%), Postives = 156/177 (88.14%), Query Frame = 1
Query:   70 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 600
            ++E+R AQRA+G ATVLAIGTA PA+ V QA YPDYYFR+TKSEH+ +LKEKF+RMCDKSMI+KR+M+LTEEIL +NP +CA+M  SLDAR  I +VEVPKLG+ AA KAIKEWGQP SKITHL+FCTTSGVDMPGADYQLTKL+GL P+VKR MMYQQGCF G TVLRLAKD+AEN
Sbjct:    6 LKEVRMAQRAEGLATVLAIGTAVPANCVYQATYPDYYFRVTKSEHLADLKEKFQRMCDKSMIRKRHMHLTEEILIKNPKICAHMETSLDARHAIALVEVPKLGQGAAEKAIKEWGQPLSKITHLVFCTTSGVDMPGADYQLTKLLGLSPTVKRLMMYQQGCFGGATVLRLAKDIAEN 182          

HSP 2 Score: 54.6842 bits (130), Expect = 7.966e-85
Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 3
Query:  600 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQA 698
            ++GARVLVVCSEITA+ FRGP  +HLDSLVG A
Sbjct:  183 NRGARVLVVCSEITAMAFRGPCKSHLDSLVGHA 215          
BLAST of FC920847 vs. ExPASy Swiss-Prot
Match: 2PS_GERHY (2-pyrone synthase OS=Gerbera hybrida GN=2PS PE=1 SV=2)

HSP 1 Score: 278.87 bits (712), Expect = 1.482e-83
Identity = 135/177 (76.27%), Postives = 153/177 (86.44%), Query Frame = 1
Query:   70 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 600
            V+ IR A RA G AT+LAIGTATP + V QADY DYYFR+TKSEHM +LKEKFKR+C+K+ IKKRY+ LTE+ L+ENP MC +MAPSL+ARQD+VV  VP LGKEAA KAI EWG PKSKITHLIFCTT+GVDMPGADYQL KL+GL PSVKR+M+YQQGC AGGTVLRLAKDLAEN
Sbjct:    9 VEVIREAGRAQGLATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKRYLALTEDYLQENPTMCEFMAPSLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYMLYQQGCAAGGTVLRLAKDLAEN 185          

HSP 2 Score: 52.373 bits (124), Expect = 1.482e-83
Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 3
Query:  600 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQA 698
            +KG+RVL+VCSEITA+ F GP + HLDSLV QA
Sbjct:  186 NKGSRVLIVCSEITAILFHGPNENHLDSLVAQA 218          
BLAST of FC920847 vs. ExPASy Swiss-Prot
Match: ACS2_RUTGR (Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 9.521e-83
Identity = 128/180 (71.11%), Postives = 157/180 (87.22%), Query Frame = 1
Query:   61 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 600
            M +++E+R AQ+++GPA +LAIGTATP +   QADYPDYYF+ITKSEHMTELK+KFK +C+KSMI+KR+M  ++E LK NP +C +M  SL+ARQDI VVE P++GKEAA KAIKEWG PKS ITHLIFCT++GVDMPGADYQLT+++GL PSVKR M+YQQGC+AGGTVLRLAKDLAEN
Sbjct:    1 MESLKEMRKAQKSEGPAAILAIGTATPDNVYIQADYPDYYFKITKSEHMTELKDKFKTLCEKSMIRKRHMCFSQEFLKANPEVCKHMGKSLNARQDIAVVETPRIGKEAAVKAIKEWGHPKSSITHLIFCTSAGVDMPGADYQLTRMLGLNPSVKRMMIYQQGCYAGGTVLRLAKDLAEN 180          

HSP 2 Score: 51.2174 bits (121), Expect = 9.521e-83
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 3
Query:  600 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQA 698
            +KG+RVLVVCSE+TA TFRGP+   +DSLVGQA
Sbjct:  181 NKGSRVLVVCSELTAPTFRGPSPDAVDSLVGQA 213          
BLAST of FC920847 vs. ExPASy Swiss-Prot
Match: ACS3_RUTGR (Probable acridone synthase 3 OS=Ruta graveolens GN=ACS3 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 2.309e-81
Identity = 126/180 (70.00%), Postives = 155/180 (86.11%), Query Frame = 1
Query:   61 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 600
            M +++E+R AQ ++GPA +LAIGTA P +   QADYPDYYF++TKSEHMTELK+KF+ +C+KSMI+KR+M  +EE LK NP +C +M  SL+ARQDI VVE P+LG EAA KAIKEWGQPKS ITHLIFC+++GVDMPGADYQLT+++GL PSVKR M+YQQGC+AGGTVLRLAKDLAEN
Sbjct:    1 MESLKEMRKAQMSEGPAAILAIGTANPDNVYMQADYPDYYFKMTKSEHMTELKDKFRTLCEKSMIRKRHMCFSEEFLKANPEVCKHMGKSLNARQDIAVVETPRLGNEAAVKAIKEWGQPKSSITHLIFCSSAGVDMPGADYQLTRILGLNPSVKRMMIYQQGCYAGGTVLRLAKDLAEN 180          

HSP 2 Score: 51.2174 bits (121), Expect = 2.309e-81
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 3
Query:  600 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQA 698
            +KG+RVLVVCSE+TA TFRGP+   +DSLVGQA
Sbjct:  181 NKGSRVLVVCSELTAPTFRGPSPDAVDSLVGQA 213          
BLAST of FC920847 vs. ExPASy Swiss-Prot
Match: ACS4_RUTGR (Probable acridone synthase 4 OS=Ruta graveolens GN=ACS4 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.929e-81
Identity = 127/180 (70.56%), Postives = 155/180 (86.11%), Query Frame = 1
Query:   61 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 600
            M +++E+R AQ ++GPA +LAIGTATP +   QADYPDYYFR+TKSEHMTELK+KF+ +C+KSMI+KR+M  +EE LK NP +  +M  SL+ARQDI VVE P+LG EAA KAIKEWGQPKS ITHLIFC+++GVDMPGADYQLT+++GL PSVKR M+YQQGC+AGGTVLRLAKDLAEN
Sbjct:    1 MESLKEMRKAQMSEGPAAILAIGTATPNNVYMQADYPDYYFRMTKSEHMTELKDKFRTLCEKSMIRKRHMCFSEEFLKANPEVSKHMGKSLNARQDIAVVETPRLGNEAAVKAIKEWGQPKSSITHLIFCSSAGVDMPGADYQLTRILGLNPSVKRMMVYQQGCYAGGTVLRLAKDLAEN 180          

HSP 2 Score: 51.2174 bits (121), Expect = 3.929e-81
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 3
Query:  600 HKGARVLVVCSEITAVTFRGPADTHLDSLVGQA 698
            +KG+RVLVVCSE+TA TFRGP+   +DSLVGQA
Sbjct:  181 NKGSRVLVVCSELTAPTFRGPSPDAVDSLVGQA 213          
BLAST of FC920847 vs. ExPASy Swiss-Prot
Match: CHSG_PETHY (Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=2 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 1.935e-80
Identity = 134/180 (74.44%), Postives = 156/180 (86.67%), Query Frame = 1
Query:   61 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 600
            MATV+EIR AQRA+GPATVLAIGTA P++ V+Q+ YPD+ FRIT S+H TELKEKFK MC+ SMIKKRY++LTEEILK NPN+C + APSL+ARQ+I V E PKLGK AA KAI+EW Q KSKITHL+FCTT+ V++PGADYQLTKL+GL PSVKR MMYQQGC+ GGT LRLAKDLAEN
Sbjct:    1 MATVEEIRKAQRAEGPATVLAIGTANPSNCVDQSAYPDFLFRITTSDHKTELKEKFKHMCEGSMIKKRYLHLTEEILKNNPNICEHKAPSLNARQEIAVAEAPKLGKRAAQKAIEEWSQSKSKITHLVFCTTTSVELPGADYQLTKLLGLSPSVKRSMMYQQGCYGGGTALRLAKDLAEN 180          

HSP 2 Score: 40.0466 bits (92), Expect = 1.935e-80
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 3
Query:  600 HKGARVLVVCSEITAVTFRGPA--DT-HLDSLVGQA 698
            +KGARVLVVC EIT ++F+ P+  DT  LD LVGQA
Sbjct:  181 NKGARVLVVCVEITVMSFQAPSRNDTDELDVLVGQA 216          
The following BLAST results are available for this feature:
BLAST of FC920847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
THS1_VITVI8.691e-8774.44Stilbene synthase 1 OS=Vitis vinifera GN=VINST1 PE... [more]
THS3_VITVI1.617e-8575.71Stilbene synthase 3 (Fragment) OS=Vitis vinifera P... [more]
THS3_ARAHY3.590e-8573.33Stilbene synthase 3 OS=Arachis hypogaea PE=2 SV=1[more]
THS1_ARAHY4.682e-8573.89Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1[more]
CHS2_HORVU7.966e-8576.27Chalcone synthase 2 OS=Hordeum vulgare GN=CHS2 PE=... [more]
2PS_GERHY1.482e-8376.272-pyrone synthase OS=Gerbera hybrida GN=2PS PE=1 S... [more]
ACS2_RUTGR9.521e-8371.11Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=... [more]
ACS3_RUTGR2.309e-8170.00Probable acridone synthase 3 OS=Ruta graveolens GN... [more]
ACS4_RUTGR3.929e-8170.56Probable acridone synthase 4 OS=Ruta graveolens GN... [more]
CHSG_PETHY1.935e-8074.44Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32013G05EF RVDevelop1 Citrus clementina cDNA clone C32013G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920847 ID=FC920847; Name=FC920847; organism=Citrus clementina; type=EST; length=698bp
TCGCCGGGGGAACTCACCAAGCACGAGCCACCAACATATTCATTAAGGGT
TCAACTTGAAATGGCAACCGTTCAAGAGATCAGAAACGCTCAGCGTGCCG
ACGGCCCGGCCACCGTCCTCGCCATCGGTACGGCCACGCCTGCCCACAGT
GTCAACCAGGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGA
GCATATGACGGAGCTTAAAGAGAAGTTCAAGCGCATGTGTGACAAGTCGA
TGATTAAGAAGCGTTACATGTACTTAACGGAAGAGATTTTGAAGGAAAAC
CCCAACATGTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACAT
TGTGGTGGTCGAAGTGCCGAAGCTCGGGAAAGAAGCTGCTACAAAGGCCA
TCAAAGAATGGGGCCAGCCCAAGTCTAAGATCACCCACCTCATCTTCTGC
ACCACCTCCGGCGTCGACATGCCCGGCGCCGACTACCAGCTCACCAAACT
GATCGGCCTGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGAT
GTTTCGCCGGTGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAAC
ACAAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCGGTCACT
TTCCGCGGCCCTGCCGATACTCATCTTGATTCTCTTGTGGGNCAGGCT
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