FC920849

Overview
NameFC920849
Unique NameFC920849
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920849 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.066e-16
Identity = 41/110 (37.27%), Postives = 69/110 (62.73%), Query Frame = 1
Query:  199 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVK 528
            L HR L DLA+KYG ++ L++G+ + VVV+SP+ AK+VL T  + F SR + +  DI     +D+ F+ YG++WR+MR+I  +   + K V+       DE  R+++ ++
Sbjct:   51 LPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQ 160          
BLAST of FC920849 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.066e-16
Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 1
Query:  205 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVK 528
            HR L DLAKKYG ++ L++G+ + VVV+SPD AKEVL T  + F SR + +  DI      D+ F+ YGE+W++MR+I      + K V+       DE  R+++ ++
Sbjct:   53 HRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQ 160          
BLAST of FC920849 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.376e-15
Identity = 49/114 (42.98%), Postives = 68/114 (59.65%), Query Frame = 1
Query:  214 LSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNG 555
            L +LA KYG V+ LRMGQ + VVVSSP  A+EVL  + V F SR   +V +IF     D+ F  YG +WR +R++ TV   + KVV+Q      DE   +V ++K    AA++G
Sbjct:   84 LRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIK----AASSG 193          
BLAST of FC920849 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.347e-15
Identity = 48/157 (30.57%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  205 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD--PLFNRLKAL 669
            HR+L  L+ +YG ++LLR G   ++VVSS D A+++L T    F SR R+ +F+    + +D+    YGE+WR+M+ +  +   TNK+V+  R   ++E + ++E ++K      N   L   L  +  + + R+   R++  + D   L  RL  L
Sbjct:   53 HRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKIQKSSSLQVN---LSELLGSLTNDVISRVALGRKYSDETDFKELMKRLTKL 206          
BLAST of FC920849 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-15
Identity = 53/185 (28.65%), Postives = 94/185 (50.81%), Query Frame = 1
Query:  121 RGKRXXXXXXXXXXXXXXNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQDD--PLFNRLKAL 669
            RGK+              N  Q+G    HR+L  L+ +YG ++LL +G+  ++VVSS D A+++L T    F SR R+ +F+     G+D+ F  YGE+WR+++ +  +   +NK+V   R   ++E + ++E ++K      N   +   L  +  + + RI   R++  + D   L  RL  L
Sbjct:   26 RGKKSNTPRSPPRLPLIGNLHQLGHH-PHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKSSSLQVN---VSELLGSLTNDVISRIALGRKYSGETDSKELMKRLMML 206          
BLAST of FC920849 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.918e-15
Identity = 48/143 (33.57%), Postives = 77/143 (53.85%), Query Frame = 1
Query:  208 RNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATN---GIVLRRRLQLMMYNNMYRIMFDRRF 627
            R   + A++YG V+ +  G    VVVS+ + AKEVL     +   R RN     F+  GQD+++  YG H+ K+R++  +  FT K ++  R   EDE   +VE V +   A  N    +V+R  L ++ +NN+ R+ F +RF
Sbjct:   53 RCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRF 195          
BLAST of FC920849 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 8.918e-15
Identity = 48/144 (33.33%), Postives = 86/144 (59.72%), Query Frame = 1
Query:  199 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFE 630
            L HR L DL+KK+G VLLLR+G  ++VV+SS + A+EVL    +E  +R +      F+  G+D+ F  YGE  R++R++  + FF+ + V+  R+  E+E   +V+ +K+  +   N + L + L  ++ + ++R  F +R +
Sbjct:   48 LFHRCLHDLSKKHGPVLLLRLGFIDMVVISSKEAAEEVLKVHDLECCTRPKTNASSKFSRDGKDIAFAPYGEVSRELRKLSLINFFSTQKVRSFRYIREEENDLMVKKLKESAK-KKNTVDLSQTLFYLVGSIIFRATFGQRLD 190          
BLAST of FC920849 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 8.918e-15
Identity = 39/145 (26.90%), Postives = 82/145 (56.55%), Query Frame = 1
Query:  205 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQD 639
            HR L  L+ +YG ++LL  G+  ++VVS PD   +++ T  ++F +R ++   +IF   G+D++F  YGE W+ M+ +  V    NK+V+    N  +E  +V+ +  ++  ++++ + L + L  +  + + RI   R++  ++
Sbjct:   54 HRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFE-NLREEEIKVMTEKLEEASSSSSSVNLSKLLMTLTNDIICRITLGRKYNEEE 197          
BLAST of FC920849 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14
Identity = 46/148 (31.08%), Postives = 85/148 (57.43%), Query Frame = 1
Query:  199 LNHRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIV-LRRRLQLMMYNNMYRIMFDRRFESQD 639
            L +++   ++++YG V+LLR+G   ++VVSS + A+EVL T  +E  +R +     +FT   +D+ F  +G+ WR+MR+I T+  F+ K ++  R+  E+E+  +V+ + K  +   N  V LR+ L     + + R+ F + F   D
Sbjct:   47 LLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQNSSVDLRKVLFSFTASIICRLAFGQNFHQCD 194          
BLAST of FC920849 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14
Identity = 39/145 (26.90%), Postives = 85/145 (58.62%), Query Frame = 1
Query:  205 HRNLSDLAKKYGDVLLLRMGQRNLVVVSSPDHAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPEAATNGIVLRRRLQLMMYNNMYRIMFDRRFESQD 639
            HR LS L+ ++G ++LLR G+  +++VSS D A +V+ T  ++F +R         +  G+D+VF  YGE+WR ++ + T+   +NK+VQ      E+E   ++E + ++   +++ + L + +  M+ + M +++  +++  ++
Sbjct:   53 HRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETL-EEASLSSSSVNLSKLITNMVSDIMGKVVLGKKYSGEE 196          
The following BLAST results are available for this feature:
BLAST of FC920849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
C71D7_SOLCH8.066e-1637.27Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71D6_SOLCH8.066e-1639.81Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C99A2_ORYSJ1.376e-1542.98Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71AM_ARATH2.347e-1530.57Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH5.228e-1528.65Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI8.918e-1533.57Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71B3_ARATH8.918e-1533.33Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71AR_ARATH8.918e-1526.90Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71BZ_ARATH1.521e-1431.08Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH1.521e-1426.90Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32013G08EF RVDevelop1 Citrus clementina cDNA clone C32013G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920849 ID=FC920849; Name=FC920849; organism=Citrus clementina; type=EST; length=673bp
GGACCACTGGAGTCCCTGTATCTCATTACGTTAATCGTAAAGATGGATCT
CCTCTTGCTGGAAAAGACGCTTTTAGCCCTCTTCGCCGCCGTTGTTGTCG
CCATTACCGTCTCTAAACTCCGCGGAAAGCGCTTCAAGCTCCCCCCCGGC
CCCCTCCCCGTCCCCGTATTCGGCAACTGGCTCCAGGTCGGCGATGACTT
GAACCATCGGAACCTCTCCGACTTAGCCAAGAAATATGGAGATGTCCTCC
TCCTCCGCATGGGCCAGCGCAACCTCGTCGTCGTCTCGTCGCCGGACCAC
GCCAAGGAGGTTCTGCACACGCAGGGAGTGGAGTTCGGATCACGAACGAG
GAACGTCGTGTTCGATATCTTCACTGGGAAGGGCCAGGACATGGTGTTCA
CAGTGTACGGCGAGCACTGGCGGAAGATGCGGAGGATCATGACCGTCCCT
TTCTTCACGAACAAAGTGGTTCAGCAGCAGCGGTTTAATTGGGAAGACGA
GGCCGCTAGAGTCGTTGAGGATGTTAAGAAGGACCCCGAGGCGGCGACCA
ATGGGATCGTCTTGAGGAGGCGGCTGCAGCTTATGATGTACAACAACATG
TACAGGATTATGTTTGATAGAAGATTCGAGAGTCAGGATGATCCTTTGTT
TAACAGATTAAAGGCTTTGAATG
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