FC920851

Overview
NameFC920851
Unique NameFC920851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5123 contig Ccv1_Contig5123:117..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: SSK22_YEAST (Serine/threonine-protein kinase SSK22 OS=Saccharomyces cerevisiae GN=SSK22 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 4.615e-22
Identity = 57/140 (40.71%), Postives = 80/140 (57.14%), Query Frame = 1
Query:  250 IRWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVD 669
            +RW+K   IG G FG VY  +NL++GE+LAVK++ I      K+                   +HPNIV+Y G+    + +NI +E+  GGS++SLL       E V + YT +LL GL YLH  G++HRDIK  NIL+D
Sbjct: 1032 MRWQKRSFIGGGTFGQVYSAINLENGEILAVKEIKIHDTTTMKKI----FPLIKEEMTVLEMLNHPNIVQYYGVEVHRDKVNIFMEYCEGGSLASLLDHGRIEDEMVTQVYTFELLEGLAYLHQSGVVHRDIKPENILLD 1167          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: WIS4_SCHPO (MAP kinase kinase kinase wis4 OS=Schizosaccharomyces pombe GN=wis4 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21
Identity = 53/142 (37.32%), Postives = 81/142 (57.04%), Query Frame = 1
Query:  250 IRWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVDXK 675
            IRW++G  +  G FG VY G+N+++G+LLAVK++ +  +   +  V                 +HPN+V Y G+    E + I +EF  GGS++ LL       E V++ Y  QLL GL Y+H+  I+HRDIK +NIL+D +
Sbjct: 1035 IRWQQGHFVRSGMFGDVYTGVNMETGDLLAVKEIKLQDSRTFRSTVDQ----IHNEMTVLERLNHPNVVTYYGVEVHREKVYIFMEFCQGGSLADLLAHGRIEDENVLKVYVVQLLEGLAYIHSQHILHRDIKPANILLDHR 1172          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: Y4251_DICDI (Probable serine/threonine-protein kinase DDB_G0284251 OS=Dictyostelium discoideum GN=DDB_G0284251 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20
Identity = 57/155 (36.77%), Postives = 84/155 (54.19%), Query Frame = 1
Query:  211 SKHISPSVKMSPPIR---WRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILV 666
            S  I P  K    ++   +  GE IG GAFG V+ G+N  +GE +A+KQ+       S +  +  +              H NIV+ LG+V  +  LN +LE+V  GS+  ++ KFGP  E +   Y  Q+L GL YLH++ ++HRDIK SNIL+
Sbjct:   18 SSQIMPDSKKKSIVKIGEYTLGEKIGRGAFGQVFKGLNGKTGEFVAIKQI------DSNKIDESSLQSVKGEVEILHKLRHNNIVKVLGVVEVQAQLNFILEYVENGSLRDVIEKFGPLSEELCIIYLYQMLQGLAYLHSNKVIHRDIKASNILI 166          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: WIN1_SCHPO (MAP kinase kinase kinase win1 OS=Schizosaccharomyces pombe GN=win1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 1
Query:  229 SVKMSPPIRWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVD 669
            S K +  IRW++G LIG G+FG+VY  +NLD+G+L+AVK+V +     S+  ++                 HPN+V Y G+    E +NI +E   G S+   L       E V++ Y  QLL GL Y+H+ G+ H+D+K  NIL D
Sbjct: 1111 SSKSNITIRWQQGGLIGSGSFGTVYRAVNLDTGDLMAVKEVALHKPRISRPMIK----RIKGEMLVLELFDHPNVVSYYGIEVHREKVNIFMELCQGSSLFEFLRYGRIEDELVIQVYVLQLLEGLAYIHSCGVSHQDVKPENILFD 1253          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: M3K1_ARATH (Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 5.641e-20
Identity = 57/143 (39.86%), Postives = 84/143 (58.74%), Query Frame = 1
Query:  256 WRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVDXKDAL 684
            W+KG+L+G G+FGSVY G++ D G+  AVK+V +        + Q+ I              H NIVRY G  ++  +L I LE V  GS+  L  ++    ++V+  YT+Q+L GL+YLH+ G +HRDIK +NILVD   A+
Sbjct:  333 WQKGQLLGRGSFGSVYEGISGD-GDFFAVKEVSL---LDQGSQAQECIQQLEGEIKLLSQLQHQNIVRYRGTAKDGSNLYIFLELVTQGSLLKLYQRY-QLRDSVVSLYTRQILDGLKYLHDKGFIHRDIKCANILVDANGAV 470          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: M3K15_HUMAN (Mitogen-activated protein kinase kinase kinase 15 OS=Homo sapiens GN=MAP3K15 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.144e-19
Identity = 53/134 (39.55%), Postives = 78/134 (58.21%), Query Frame = 1
Query:  271 LIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLL-GKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVD 669
            ++G G +G VY G +L +   +A+K++         E+   +               H NIV+YLG V E   + I +E VPGGS+S+LL  K+GP  E  ++ YTKQ+L GL+YLH + I+HRDIKG N+LV+
Sbjct:  657 VLGKGTYGIVYAGRDLSNQVRIAIKEI--------PERDSRYSQPLHEEIALHKYLKHRNIVQYLGSVSENGYIKIFMEQVPGGSLSALLRSKWGPMKEPTIKFYTKQILEGLKYLHENQIVHRDIKGDNVLVN 782          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: M3K4_MOUSE (Mitogen-activated protein kinase kinase kinase 4 OS=Mus musculus GN=Map3k4 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 69/218 (31.65%), Postives = 101/218 (46.33%), Query Frame = 1
Query:   61 DLFGSVRRSIVLCTTAESTNDSQTANSPTPFSGGNLVERFNSCIRNSRVLSKHISPSVKMSPP--------------IRWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDH--IXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILV 666
            D  GS RRS  L T    T DS  A+   P        R     R   +  K+I   V  +P                +W++G  IG G +G VY  +++D+GEL+A+K++    N        DH  I              HPN+VRY G+    E + I +E+   G++  +  + G   E V+R YTKQ+ + +  LH HGI+HRDIKG+NI +
Sbjct: 1255 DSSGSTRRSWELRTLISQTKDS--ASKQGPIEAIQKSVRLFEERRYREMRRKNIIGQVCDTPKSYDNVMHVGLRKVTFKWQRGNKIGEGQYGKVYTCISVDTGELMAMKEIRFQPN--------DHKTIKETADELKIFEGIKHPNLVRYFGVELHREEMYIFMEYCDEGTLEEV-SRLG-LQEHVIRLYTKQITVAINVLHEHGIVHRDIKGANIFL 1460          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: M3K15_MOUSE (Mitogen-activated protein kinase kinase kinase 15 OS=Mus musculus GN=Map3k15 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 53/134 (39.55%), Postives = 79/134 (58.96%), Query Frame = 1
Query:  271 LIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLL-GKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVD 669
            ++G G++G VY G +L +   +A+K++         E+   +               H NIV+YLG V E   + I +E VPGGS+S+LL  K+GP  E  ++ YTKQ+L GL+YLH + I+HRDIKG N+LV+
Sbjct:  661 VLGKGSYGIVYAGRDLSNQVRIAIKEI--------PERDIRYSQPLHEEIALHKYLKHRNIVQYLGSVSENGYIKIFMEQVPGGSLSALLRSKWGPMKEPTIKFYTKQILEGLKYLHENQIVHRDIKGDNVLVN 786          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: Y0146_DICDI (Probable serine/threonine-protein kinase DDB_G0270146 OS=Dictyostelium discoideum GN=DDB_G0270146 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = 1
Query:  274 IGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVD 669
            IG GAF +V+ G+N  SG+ +A+K+      F   +   +               +H NIVR LG    E  + I LE++  GS+S++L  FG FPE+++  Y + +L GL YLH  G++HRDIK +NIL++
Sbjct:   83 IGKGAFATVFKGLNTLSGDFVAIKR------FEKSKISNEQHSSVSTEFDILQRLNHENIVRILGREENENYIYIFLEYMENGSLSTILNNFGTFPESLICNYVENVLKGLVYLHQEGVIHRDIKAANILIN 208          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: Y9877_DICDI (Serine/threonine-protein kinase DDB_G0283821 OS=Dictyostelium discoideum GN=DDB_G0283821 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18
Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 1
Query:  253 RWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILV 666
            +++ GE +G GAFG V+  +N ++G+  A+KQ  I     S++++   I              HPNIV+++        L   LEF+ GGS++ +  ++G F E ++  Y  Q+L GL YLH  G++HRDIK  NIL+
Sbjct:   12 KYQIGEAVGKGAFGKVFKALNAETGDFCAIKQ--IEKTIISEKQLPSIIQEIKLLQTL----QHPNIVKFIESYETSRYLYFALEFIEGGSLAKIAKRYGCFQEPLLSRYFSQVLKGLAYLHEKGVIHRDIKSDNILI 143          
The following BLAST results are available for this feature:
BLAST of FC920851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
SSK22_YEAST4.615e-2240.71Serine/threonine-protein kinase SSK22 OS=Saccharom... [more]
WIS4_SCHPO2.290e-2137.32MAP kinase kinase kinase wis4 OS=Schizosaccharomyc... [more]
Y4251_DICDI1.137e-2036.77Probable serine/threonine-protein kinase DDB_G0284... [more]
WIN1_SCHPO1.485e-2037.41MAP kinase kinase kinase win1 OS=Schizosaccharomyc... [more]
M3K1_ARATH5.641e-2039.86Mitogen-activated protein kinase kinase kinase 1 O... [more]
M3K15_HUMAN2.144e-1939.55Mitogen-activated protein kinase kinase kinase 15 ... [more]
M3K4_MOUSE3.657e-1931.65Mitogen-activated protein kinase kinase kinase 4 O... [more]
M3K15_MOUSE3.657e-1939.55Mitogen-activated protein kinase kinase kinase 15 ... [more]
Y0146_DICDI4.776e-1937.12Probable serine/threonine-protein kinase DDB_G0270... [more]
Y9877_DICDI1.389e-1834.78Serine/threonine-protein kinase DDB_G0283821 OS=Di... [more]

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Properties
Property NameValue
Genbank descriptionC32013G10EF RVDevelop1 Citrus clementina cDNA clone C32013G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920851 ID=FC920851; Name=FC920851; organism=Citrus clementina; type=EST; length=689bp
GGAAGCAACTCTGTTAAAGCTTCATAACAAGCTTCCAAGTTTGGATTCAT
GGGAGATCATGATCTCTTCGGCTCAGTGCGCCGATCAATTGTATTATGTA
CGACGGCGGAGTCCACCAACGACTCACAAACGGCAAACTCACCGACGCCT
TTTTCCGGAGGAAATTTGGTGGAAAGGTTCAATTCTTGCATCCGCAATTC
TCGAGTTTTAAGCAAACACATTTCGCCGTCGGTAAAAATGTCGCCGCCGA
TCCGATGGCGGAAGGGCGAGTTGATCGGTTGTGGGGCTTTTGGAAGTGTG
TATATGGGAATGAATCTTGATTCCGGCGAGCTTTTAGCGGTGAAGCAGGT
CTTAATTGCGGCAAATTTTGCTTCAAAGGAAAAAGTGCAGGATCACATCA
AGGAGCTTGAGGAAGAATTTAAGCTTCTAAAAGATCTCTCTCATCCAAAC
ATTGTTAGATACTTGGGGATGGTTAGGGAGGAGGAATCATTAAATATTCT
GTTGGAGTTTGTTCCTGGTGGATCAATATCATCACTTCTGGGGAAATTCG
GACCCTTCCCAGAGGCTGTTATGCGAACTTACACGAAACAATTGTTGTTG
GGGCTGGAATATTTGCACAATCATGGAATTATGCACAGGGACATTAAAGG
GAGCAATATCCTTGTAGACNATAAGGATGCATTAAACTG
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