FC920851

Overview
NameFC920851
Unique NameFC920851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: KS6A3_MOUSE (Ribosomal protein S6 kinase alpha-3 OS=Mus musculus GN=Rps6ka3 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 44/157 (28.03%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  208 LSKHISPSVKMSPPIRWRKGELIGCGAFGSVYMGMNL---DSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVD 669
            ++ H+    + + P ++   +++G G+FG V++   +   D+ +L A+K VL  A    +++V+  +             +HP IV+     + E  L ++L+F+ GG + + L K   F E  ++ Y  +L L L++LH+ GI++RD+K  NIL+D
Sbjct:   52 ITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVRDRVRTKMERDILVEV-----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD 202          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: KS6A3_HUMAN (Ribosomal protein S6 kinase alpha-3 OS=Homo sapiens GN=RPS6KA3 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 44/157 (28.03%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  208 LSKHISPSVKMSPPIRWRKGELIGCGAFGSVYMGMNL---DSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVD 669
            ++ H+    + + P ++   +++G G+FG V++   +   D+ +L A+K VL  A    +++V+  +             +HP IV+     + E  L ++L+F+ GG + + L K   F E  ++ Y  +L L L++LH+ GI++RD+K  NIL+D
Sbjct:   52 ITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMK-VLKKATLKVRDRVRTKMERDILVEV-----NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD 202          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: GSK3B_RAT (Glycogen synthase kinase-3 beta OS=Rattus norvegicus GN=Gsk3b PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 48/149 (32.21%), Postives = 73/149 (48.99%), Query Frame = 1
Query:  268 ELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYL------GMVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVDXKDAL 684
            ++IG G+FG VY     DSGEL+A+K+VL    F ++E                    H NIVR        G  ++E  LN++L++VP  ++  +   +       P   ++ Y  QL   L Y+H+ GI HRDIK  N+L+D   A+
Sbjct:   60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 195          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: GSK3B_MOUSE (Glycogen synthase kinase-3 beta OS=Mus musculus GN=Gsk3b PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 48/149 (32.21%), Postives = 73/149 (48.99%), Query Frame = 1
Query:  268 ELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYL------GMVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVDXKDAL 684
            ++IG G+FG VY     DSGEL+A+K+VL    F ++E                    H NIVR        G  ++E  LN++L++VP  ++  +   +       P   ++ Y  QL   L Y+H+ GI HRDIK  N+L+D   A+
Sbjct:   60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 195          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: GSK3B_HUMAN (Glycogen synthase kinase-3 beta OS=Homo sapiens GN=GSK3B PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 48/149 (32.21%), Postives = 73/149 (48.99%), Query Frame = 1
Query:  268 ELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYL------GMVREEESLNILLEFVPGGSISSLLGKFG----PFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVDXKDAL 684
            ++IG G+FG VY     DSGEL+A+K+VL    F ++E                    H NIVR        G  ++E  LN++L++VP  ++  +   +       P   ++ Y  QL   L Y+H+ GI HRDIK  N+L+D   A+
Sbjct:   60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------------LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 195          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: CHK1_DROME (Serine/threonine-protein kinase grp OS=Drosophila melanogaster GN=grp PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 41/141 (29.08%), Postives = 66/141 (46.81%), Query Frame = 1
Query:  256 WRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVDXKD 678
            W   + +G GA+G V + +N  +GE +A+K V +  +  +   V+  +                +I+R+ G   +     I LE+  GG +   +      P+   + Y  QLL GL YLH  GI HRD+K  N+L+D  D
Sbjct:   22 WTLAQTLGEGAYGEVKLLINRQTGEAVAMKMVDLKKHPDAANSVRKEVCIQKML-------QDKHILRFFGKRSQGSVEYIFLEYAAGGELFDRIEPDVGMPQHEAQRYFTQLLSGLNYLHQRGIAHRDLKPENLLLDEHD 155          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: CHK1_CAEEL (Serine/threonine-protein kinase chk-1 OS=Caenorhabditis elegans GN=chk-1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 40/141 (28.37%), Postives = 72/141 (51.06%), Query Frame = 1
Query:  244 PPIRWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILV 666
            P   +R  + +G GAFG V + +N  + E+ A  + +  AN  SK+ + D+I              H N++R +GM  + +   + LE+  GG +   +           + Y KQL+ GL+++H++ ++HRDIK  N+L+
Sbjct:   20 PESLYRVVQTLGEGAFGEVLLIVNTKNPEVAAAMKKINIAN-KSKDFI-DNIRKEYLLQKRVSAVGHDNVIRMIGMRNDPQFYYLFLEYADGGELFDKIEPDCGMSPVFAQFYFKQLICGLKFIHDNDVVHRDIKPENLLL 158          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: AUKBA_XENLA (Serine/threonine-protein kinase 12-A OS=Xenopus laevis GN=aurkb-A PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 41/140 (29.29%), Postives = 67/140 (47.86%), Query Frame = 1
Query:  265 GELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVDXKDAL 684
            G  +G G FG+VY+     +  ++A+K  ++  +   KE V+  +              HPNI+R      + + + ++LEF P G +   L K G F E    T+ ++L   L Y H   ++HRDIK  N+L+  K  L
Sbjct:   96 GRPLGKGKFGNVYLAREKQNKFIMALK--VLFKSQLEKEGVEHQLRREIEIQSHLR---HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGEL 230          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: ARBK1_MESAU (Beta-adrenergic receptor kinase 1 OS=Mesocricetus auratus GN=ADRBK1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 42/140 (30.00%), Postives = 72/140 (51.43%), Query Frame = 1
Query:  271 LIGCGAFGSVYMGMNLDSGELLAVK-------QVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVD 669
            +IG G FG VY     D+G++ A+K       ++      A  E++   +               P IV      R  ++L+ +L+ + GG +   L + G F EA MR+Y  +++LGLE++HN  +++RD+K +NIL+D
Sbjct:  196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC---------PFIVCMSYAFRTPDNLSFILDLMNGGDLHYHLSQHGVFSEADMRSYAAEIILGLEHMHNRFVVYRDLKPANILLD 326          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: AAPK2_CAEEL (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Caenorhabditis elegans GN=aak-2 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 35/139 (25.18%), Postives = 69/139 (49.64%), Query Frame = 1
Query:  268 ELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQ--DHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVDXKD 678
            E +G G FG V +G++          Q  +A    +++K++  D +              HP+I+R   ++     + +++E V GG +   + K G    A  R + +Q++ G++Y H H ++HRD+K  N+L+D ++
Sbjct:   91 ETLGVGTFGKVKVGIH-------ETTQYKVAVKILNRQKIKSLDVVGKIRREIQNLSLFRHPHIIRLYQVISTPSDIFMIMEHVSGGELFDYIVKHGRLKTAEARRFFQQIISGVDYCHRHMVVHRDLKPENLLLDEQN 222          
The following BLAST results are available for this feature:
BLAST of FC920851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
KS6A3_MOUSE8.165e-1128.03Ribosomal protein S6 kinase alpha-3 OS=Mus musculu... [more]
KS6A3_HUMAN8.165e-1128.03Ribosomal protein S6 kinase alpha-3 OS=Homo sapien... [more]
GSK3B_RAT8.165e-1132.21Glycogen synthase kinase-3 beta OS=Rattus norvegic... [more]
GSK3B_MOUSE8.165e-1132.21Glycogen synthase kinase-3 beta OS=Mus musculus GN... [more]
GSK3B_HUMAN8.165e-1132.21Glycogen synthase kinase-3 beta OS=Homo sapiens GN... [more]
CHK1_DROME8.165e-1129.08Serine/threonine-protein kinase grp OS=Drosophila ... [more]
CHK1_CAEEL8.165e-1128.37Serine/threonine-protein kinase chk-1 OS=Caenorhab... [more]
AUKBA_XENLA8.165e-1129.29Serine/threonine-protein kinase 12-A OS=Xenopus la... [more]
ARBK1_MESAU8.165e-1130.00Beta-adrenergic receptor kinase 1 OS=Mesocricetus ... [more]
AAPK2_CAEEL8.165e-1125.185'-AMP-activated protein kinase catalytic subunit ... [more]

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Properties
Property NameValue
Genbank descriptionC32013G10EF RVDevelop1 Citrus clementina cDNA clone C32013G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920851 ID=FC920851; Name=FC920851; organism=Citrus clementina; type=EST; length=689bp
GGAAGCAACTCTGTTAAAGCTTCATAACAAGCTTCCAAGTTTGGATTCAT
GGGAGATCATGATCTCTTCGGCTCAGTGCGCCGATCAATTGTATTATGTA
CGACGGCGGAGTCCACCAACGACTCACAAACGGCAAACTCACCGACGCCT
TTTTCCGGAGGAAATTTGGTGGAAAGGTTCAATTCTTGCATCCGCAATTC
TCGAGTTTTAAGCAAACACATTTCGCCGTCGGTAAAAATGTCGCCGCCGA
TCCGATGGCGGAAGGGCGAGTTGATCGGTTGTGGGGCTTTTGGAAGTGTG
TATATGGGAATGAATCTTGATTCCGGCGAGCTTTTAGCGGTGAAGCAGGT
CTTAATTGCGGCAAATTTTGCTTCAAAGGAAAAAGTGCAGGATCACATCA
AGGAGCTTGAGGAAGAATTTAAGCTTCTAAAAGATCTCTCTCATCCAAAC
ATTGTTAGATACTTGGGGATGGTTAGGGAGGAGGAATCATTAAATATTCT
GTTGGAGTTTGTTCCTGGTGGATCAATATCATCACTTCTGGGGAAATTCG
GACCCTTCCCAGAGGCTGTTATGCGAACTTACACGAAACAATTGTTGTTG
GGGCTGGAATATTTGCACAATCATGGAATTATGCACAGGGACATTAAAGG
GAGCAATATCCTTGTAGACNATAAGGATGCATTAAACTG
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