FC920851

Overview
NameFC920851
Unique NameFC920851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5123 contig Ccv1_Contig5123:117..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: M4K3_HUMAN (Mitogen-activated protein kinase kinase kinase kinase 3 OS=Homo sapiens GN=MAP4K3 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16
Identity = 51/133 (38.35%), Postives = 70/133 (52.63%), Query Frame = 1
Query:  274 IGCGAFGSVYMGMNLDSGELLAVKQVLI--AANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILV 666
            IG G +G VY   N+++GEL A+K + +    +FA    VQ  I              HPNIV Y G     + L I +EF  GGS+  +    GP  E  +   +++ L GL YLH+ G MHRDIKG+NIL+
Sbjct:   22 IGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAV---VQQEIIMMKDC-------KHPNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSELQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL 144          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: M3K6_MOUSE (Mitogen-activated protein kinase kinase kinase 6 OS=Mus musculus GN=Map3k6 PE=1 SV=4)

HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15
Identity = 50/136 (36.76%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  271 LIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGK-FGPFP--EAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVD 669
            ++G G +G VY G +  +   +A+K++         E+                   H NIVRYLG   +   L I +E VPGGS+SSLL   +GP    E+ +  YT+Q+L GL YLH + I+HRDIKG N+L++
Sbjct:  654 VLGRGTYGVVYAGRDRHTRVRIAIKEI--------PERDSRFSQPLHEEIALHKRLRHKNIVRYLGSASQGGYLKIFMEEVPGGSLSSLLRSVWGPLKDNESTISFYTRQILQGLSYLHENRIVHRDIKGDNVLIN 781          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: M3K6_HUMAN (Mitogen-activated protein kinase kinase kinase 6 OS=Homo sapiens GN=MAP3K6 PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 50/136 (36.76%), Postives = 74/136 (54.41%), Query Frame = 1
Query:  271 LIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGK-FGPFP--EAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVD 669
            ++G G +G VY G +  +   +A+K++         E+                   H NIVRYLG   +   L I +E VPGGS+SSLL   +GP    E+ +  YT+Q+L GL YLH++ I+HRDIKG N+L++
Sbjct:  653 VLGKGTYGVVYAGRDRHTRVRIAIKEI--------PERDSRFSQPLHEEIALHRRLRHKNIVRYLGSASQGGYLKIFMEEVPGGSLSSLLRSVWGPLKDNESTISFYTRQILQGLGYLHDNHIVHRDIKGDNVLIN 780          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: RAD53_YEAST (Serine/threonine-protein kinase RAD53 OS=Saccharomyces cerevisiae GN=RAD53 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.136e-15
Identity = 52/181 (28.73%), Postives = 86/181 (47.51%), Query Frame = 1
Query:  163 NLVERFNSCIRNSRVLSKHISPSVKMSPPIRWRKG---------ELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVDXKD 678
            N V+R  S ++N+  ++     S   S  +  + G         E++G GAF +V   +   +G+  AVK +       SK KV  ++             +HP IVR  G   + ES  +++EFV GG +   +   G   E   R  ++Q+L  ++Y+H+ GI HRD+K  NIL++  D
Sbjct:  158 NKVDRIRSNLKNTSKIASPGLTSSTASSMVANKTGIFKDFSIIDEVVGQGAFATVKKAIERTTGKTFAVKII-------SKRKVIGNMDGVTRELEVLQKLNHPRIVRLKGFYEDTESYYMVMEFVSGGDLMDFVAAHGAVGEDAGREISRQILTAIKYIHSMGISHRDLKPDNILIEQDD 331          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: M4K3_RAT (Mitogen-activated protein kinase kinase kinase kinase 3 OS=Rattus norvegicus GN=Map4k3 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.136e-15
Identity = 50/133 (37.59%), Postives = 69/133 (51.88%), Query Frame = 1
Query:  274 IGCGAFGSVYMGMNLDSGELLAVKQVLI--AANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILV 666
            IG G +G VY   N+++GEL A+K + +    +FA    VQ  I              H NIV Y G     + L I +EF  GGS+  +    GP  E  +   +++ L GL YLH+ G MHRDIKG+NIL+
Sbjct:   22 IGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAV---VQQEIIMMKDC-------KHANIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSELQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL 144          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: KOK0_YEAST (Probable serine/threonine-protein kinase YOL100W OS=Saccharomyces cerevisiae GN=YOL100W PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.320e-15
Identity = 43/135 (31.85%), Postives = 74/135 (54.81%), Query Frame = 1
Query:  265 GELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVD 669
            G +IG GA+ +V +  ++D+ +  A K  ++   +  ++K   ++             + P++VR     ++E SL  LLE+ P G   SL+ K+G   E   R Y  Q++  ++YLH++GI+HRDIK  NIL+D
Sbjct:  182 GSVIGDGAYSTVMLATSIDTKKRYAAK--VLNKEYLIRQKKVKYVSIEKTALQKLN--NSPSVVRLFSTFQDESSLYFLLEYAPNGDFLSLMKKYGSLDETCARYYAAQIIDAIDYLHSNGIIHRDIKPENILLD 312          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: CIPKQ_ORYSJ (CBL-interacting protein kinase 26 OS=Oryza sativa subsp. japonica GN=CIPK26 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.320e-15
Identity = 46/146 (31.51%), Postives = 73/146 (50.00%), Query Frame = 1
Query:  253 RWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQ--DHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILVDXKDAL 684
            R+  G  +G G F  VY   NL SG+ +A+K +        KEKV     +              HPNI++   ++  +  +  +LE+  GG +   + K G F E V R Y  QL+ G++Y H+ G+ HRD+K  N+L+D  ++L
Sbjct:   11 RYEIGRQLGQGNFAKVYYARNLTSGQAVAIKMI-------DKEKVTRVGLMVQIKREISIMRLVKHPNILQLFEVMASKSKIYFVLEYAKGGELFKKISK-GKFSEDVARRYFHQLISGIDYCHSRGVYHRDLKPENLLLDENESL 148          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: M4K5_MOUSE (Mitogen-activated protein kinase kinase kinase kinase 5 OS=Mus musculus GN=Map4k5 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.076e-14
Identity = 48/145 (33.10%), Postives = 68/145 (46.90%), Query Frame = 1
Query:  232 VKMSPPIRWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILV 666
            ++ +P   +   + +G G +G VY   N+ +GEL AVK +        K +  D                H NIV Y G     E L I +E+  GGS+  +    GP  E  +    ++ L GL YLH  G MHRDIKG+NIL+
Sbjct:   12 LRRNPQHDYELVQRVGSGTYGDVYKARNVHTGELAAVKII--------KLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSEMQIAYVCRETLQGLAYLHTKGKMHRDIKGANILL 148          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: M4K5_HUMAN (Mitogen-activated protein kinase kinase kinase kinase 5 OS=Homo sapiens GN=MAP4K5 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.076e-14
Identity = 48/145 (33.10%), Postives = 68/145 (46.90%), Query Frame = 1
Query:  232 VKMSPPIRWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILV 666
            ++ +P   +   + +G G +G VY   N+ +GEL AVK +        K +  D                H NIV Y G     E L I +E+  GGS+  +    GP  E  +    ++ L GL YLH  G MHRDIKG+NIL+
Sbjct:   12 LRRNPQQDYELVQRVGSGTYGDVYKARNVHTGELAAVKII--------KLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHTKGKMHRDIKGANILL 148          
BLAST of FC920851 vs. ExPASy Swiss-Prot
Match: STK25_MOUSE (Serine/threonine-protein kinase 25 OS=Mus musculus GN=Stk25 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.712e-14
Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 1
Query:  235 KMSPPIRWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESLNILLEFVPGGSISSLLGKFGPFPEAVMRTYTKQLLLGLEYLHNHGIMHRDIKGSNILV 666
            ++ P   + K + IG G+FG VY G++  + E++A+K + +       E+ +D I               P I RY G   +   L I++E++ GGS   LL K GP  E  + T  +++L GL+YLH+   +HRDIK +N+L+
Sbjct:   13 RVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDL-------EEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL 148          
The following BLAST results are available for this feature:
BLAST of FC920851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 270
Match NameE-valueIdentityDescription
M4K3_HUMAN8.430e-1638.35Mitogen-activated protein kinase kinase kinase kin... [more]
M3K6_MOUSE2.453e-1536.76Mitogen-activated protein kinase kinase kinase 6 O... [more]
M3K6_HUMAN3.203e-1536.76Mitogen-activated protein kinase kinase kinase 6 O... [more]
RAD53_YEAST7.136e-1528.73Serine/threonine-protein kinase RAD53 OS=Saccharom... [more]
M4K3_RAT7.136e-1537.59Mitogen-activated protein kinase kinase kinase kin... [more]
KOK0_YEAST9.320e-1531.85Probable serine/threonine-protein kinase YOL100W O... [more]
CIPKQ_ORYSJ9.320e-1531.51CBL-interacting protein kinase 26 OS=Oryza sativa ... [more]
M4K5_MOUSE2.076e-1433.10Mitogen-activated protein kinase kinase kinase kin... [more]
M4K5_HUMAN2.076e-1433.10Mitogen-activated protein kinase kinase kinase kin... [more]
STK25_MOUSE2.712e-1432.64Serine/threonine-protein kinase 25 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionC32013G10EF RVDevelop1 Citrus clementina cDNA clone C32013G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920851 ID=FC920851; Name=FC920851; organism=Citrus clementina; type=EST; length=689bp
GGAAGCAACTCTGTTAAAGCTTCATAACAAGCTTCCAAGTTTGGATTCAT
GGGAGATCATGATCTCTTCGGCTCAGTGCGCCGATCAATTGTATTATGTA
CGACGGCGGAGTCCACCAACGACTCACAAACGGCAAACTCACCGACGCCT
TTTTCCGGAGGAAATTTGGTGGAAAGGTTCAATTCTTGCATCCGCAATTC
TCGAGTTTTAAGCAAACACATTTCGCCGTCGGTAAAAATGTCGCCGCCGA
TCCGATGGCGGAAGGGCGAGTTGATCGGTTGTGGGGCTTTTGGAAGTGTG
TATATGGGAATGAATCTTGATTCCGGCGAGCTTTTAGCGGTGAAGCAGGT
CTTAATTGCGGCAAATTTTGCTTCAAAGGAAAAAGTGCAGGATCACATCA
AGGAGCTTGAGGAAGAATTTAAGCTTCTAAAAGATCTCTCTCATCCAAAC
ATTGTTAGATACTTGGGGATGGTTAGGGAGGAGGAATCATTAAATATTCT
GTTGGAGTTTGTTCCTGGTGGATCAATATCATCACTTCTGGGGAAATTCG
GACCCTTCCCAGAGGCTGTTATGCGAACTTACACGAAACAATTGTTGTTG
GGGCTGGAATATTTGCACAATCATGGAATTATGCACAGGGACATTAAAGG
GAGCAATATCCTTGTAGACNATAAGGATGCATTAAACTG
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