FC920854

Overview
NameFC920854
Unique NameFC920854
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_STAES (Catalase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=katA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.587e-37
Identity = 77/162 (47.53%), Postives = 110/162 (67.90%), Query Frame = 1
Query:  151 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            GAPV +  +S+T G RGP+L++D + +E+++HF RE IPER +HA+G+ A G F  T+DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GNWDL+GN+ PVFF RD   F  +  A K +P+++++      DF + LPE+L
Sbjct:   13 GAPVSDRENSMTAGQRGPLLMQDVYYLEQISHFDREVIPERRMHAKGSGAFGTFTVTNDITQYTNAKIFSEVGKQTEMFARFSTVSGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFISLNRAVKRDPRTNMRSAQNNWDFWTGLPEAL 174          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_STAEQ (Catalase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=katA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.587e-37
Identity = 77/162 (47.53%), Postives = 110/162 (67.90%), Query Frame = 1
Query:  151 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            GAPV +  +S+T G RGP+L++D + +E+++HF RE IPER +HA+G+ A G F  T+DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GNWDL+GN+ PVFF RD   F  +  A K +P+++++      DF + LPE+L
Sbjct:   13 GAPVSDRENSMTAGQRGPLLMQDVYYLEQISHFDREVIPERRMHAKGSGAFGTFTVTNDITQYTNAKIFSEVGKQTEMFARFSTVSGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFISLNRAVKRDPRTNMRSAQNNWDFWTGLPEAL 174          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_STAEP (Catalase OS=Staphylococcus epidermidis GN=katA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.685e-37
Identity = 77/162 (47.53%), Postives = 110/162 (67.90%), Query Frame = 1
Query:  151 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            GAPV +  +S+T G RGP+L++D + +E+++HF RE IPER +HA+G+ A G F  T+DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GNWDL+GN+ PVFF RD   F  +  A K +P+++++      DF + LPE+L
Sbjct:   13 GAPVSDRENSMTAGRRGPLLMQDVYYLEQISHFDREVIPERRMHAKGSGAFGTFTVTNDITQYTNAKIFSEVGKQTEMFARFSTVSGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDPKLFISLNRAVKRDPRTNMRSAQNNWDFWTGLPEAL 174          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_STAHJ (Catalase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=katA PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.037e-36
Identity = 75/162 (46.30%), Postives = 110/162 (67.90%), Query Frame = 1
Query:  151 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            G PV +  +S+T G RGP+L++D + +E+++HF RE IPER +HA+G+ A G F  T+DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT +GNWDL+GN+ PVFF RD+  F  +  A K +P+++++      DF + +PE+L
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDAYFLEQMSHFDREVIPERRMHAKGSGAFGTFTVTNDITKYTNAKIFSEVGKQTEMFARFSTVAGERGAADLERDIRGFALKFYTEDGNWDLVGNNTPVFFFRDSKLFVSLNRAVKRDPRTNMRSPQNNWDFWTGVPEAL 174          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_YEAST (Peroxisomal catalase A OS=Saccharomyces cerevisiae GN=CTA1 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.966e-36
Identity = 74/159 (46.54%), Postives = 105/159 (66.04%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDF 612
            +T + G P+     +  +G  GP+LL+DY+L++ LAHF RE IP+R  HA G+ A G+FE T DI+ +  + +F   G +T  + RFSTV  ++GS +T+RDPRGFA KFYT EGN D + N+ PVFFIRD  KFP  IH  K NP++++++     DF
Sbjct:   22 VTNSTGNPINEPFVTQRIGEHGPLLLQDYNLIDSLAHFNRENIPQRNPHAHGSGAFGYFEVTDDITDICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRDPRGFATKFYTEEGNLDWVYNNTPVFFIRDPSKFPHFIHTQKRNPQTNLRDADMFWDF 180          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_STAAW (Catalase OS=Staphylococcus aureus (strain MW2) GN=katA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.179e-36
Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 1
Query:  151 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEAL 174          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_STAAU (Catalase OS=Staphylococcus aureus GN=katA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.179e-36
Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 1
Query:  151 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEAL 174          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_STAAS (Catalase OS=Staphylococcus aureus (strain MSSA476) GN=katA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.179e-36
Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 1
Query:  151 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEAL 174          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_STAAR (Catalase OS=Staphylococcus aureus (strain MRSA252) GN=katA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.179e-36
Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 1
Query:  151 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEAL 174          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_STAAN (Catalase OS=Staphylococcus aureus (strain N315) GN=katA PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 5.179e-36
Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 1
Query:  151 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEAL 174          
The following BLAST results are available for this feature:
BLAST of FC920854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_STAES3.587e-3747.53Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_STAEQ3.587e-3747.53Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_STAEP4.685e-3747.53Catalase OS=Staphylococcus epidermidis GN=katA PE=... [more]
CATA_STAHJ3.037e-3646.30Catalase OS=Staphylococcus haemolyticus (strain JC... [more]
CATA_YEAST3.966e-3646.54Peroxisomal catalase A OS=Saccharomyces cerevisiae... [more]
CATA_STAAW5.179e-3646.91Catalase OS=Staphylococcus aureus (strain MW2) GN=... [more]
CATA_STAAU5.179e-3646.91Catalase OS=Staphylococcus aureus GN=katA PE=3 SV=... [more]
CATA_STAAS5.179e-3646.91Catalase OS=Staphylococcus aureus (strain MSSA476)... [more]
CATA_STAAR5.179e-3646.91Catalase OS=Staphylococcus aureus (strain MRSA252)... [more]
CATA_STAAN5.179e-3646.91Catalase OS=Staphylococcus aureus (strain N315) GN... [more]

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Properties
Property NameValue
Genbank descriptionC32013H02EF RVDevelop1 Citrus clementina cDNA clone C32013H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920854 ID=FC920854; Name=FC920854; organism=Citrus clementina; type=EST; length=661bp
AACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATAAT
AATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTACA
AATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATGCC
GGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGAGG
TCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTTTG
CCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCT
AAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCTGA
TCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCA
CTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGGA
TTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTAA
CAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTGA
TCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAGG
ATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCTG
GTTCTTTGATG
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