FC920854

Overview
NameFC920854
Unique NameFC920854
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:4..664. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.436e-86
Identity = 151/191 (79.06%), Postives = 168/191 (87.96%), Query Frame = 1 
Query:   88 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFD 660
            MDPY+  PS+  NAPF TTN+GAPVWN+N S+TVG RGP+LLEDYHLVEKLA+F RERIPERVVHARGASAKGFFE THDI++L+CAD  RAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGN+DL+GN+ PVFFIRD +KF   +H  KPNPKSHIQE WRILDF SH PESL+ FS+ FD
Sbjct:    1 MDPYRHRPSSAFNAPFWTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEVTHDITNLSCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFIRDGMKFTRHVHPLKPNPKSHIQENWRILDFFSHHPESLNMFSFLFD 191
[Close]
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 3.199e-86
Identity = 144/191 (75.39%), Postives = 168/191 (87.96%), Query Frame = 1 
Query:   88 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFD 660
            MDPYK  PS+ +N PF TTN+GAP+WN+   ++VG RGP+LLEDY L+EK+A F RERIPERVVHARGASAKGFFE THD+S L+CAD  RAPGVQTPVIVRFSTVIHER SPET+RDPRGFAVKFYTREGN+DL+GN+ PVFF+RDA++FPDVI AFKPNPKSH+QE WR LDFCS+ PESL +F+WF+D
Sbjct:    1 MDPYKYRPSSAYNTPFCTTNSGAPIWNNTAVMSVGERGPILLEDYQLIEKIATFTRERIPERVVHARGASAKGFFEVTHDVSDLSCADFLRAPGVQTPVIVRFSTVIHERVSPETVRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDAMQFPDVIRAFKPNPKSHLQESWRFLDFCSYHPESLLSFAWFYD 191
[Close]
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA1_HORVU (Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.588e-85
Identity = 144/191 (75.39%), Postives = 171/191 (89.53%), Query Frame = 1 
Query:   88 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFD 660
            MDPYK  P++  N+ + TTN+GAPVWN+N++LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+S LTCAD  RAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGN+DL+GN++PVFFIRD +KFPD++HAFKP+PK+++QE WR++DF SH PESL  F++ FD
Sbjct:    1 MDPYKHRPTSGANSAYWTTNSGAPVWNNNNALTVGHRGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSPKTNMQENWRVVDFFSHHPESLHMFTFLFD 191
[Close]
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 314.309 bits (804), Expect = 3.537e-85
Identity = 150/191 (78.53%), Postives = 166/191 (86.91%), Query Frame = 1 
Query:   88 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFD 660
            MD  K  PS+ +++PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVI RFSTV+HERGSPE+LRD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQEYW+ILDF S LPESL TF+WFFD
Sbjct:    1 MDLSKFRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVHERGSPESLRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQEYWKILDFFSFLPESLHTFAWFFD 191
[Close]
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.344e-84
Identity = 143/191 (74.87%), Postives = 170/191 (89.01%), Query Frame = 1 
Query:   88 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFD 660
            MDPYK  P++  N+ + TTN+GAPVWN+N++LTVG RGP+LLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+S LTCAD  RAPGVQTPVIVRFSTV+HERGSPETLRDPRGFAVKFYTREGN+DL+GN++PVFFIRD +KFPD++HAFKP+ K+++QE WR++DF SH PESL  F++ FD
Sbjct:    1 MDPYKHRPTSGANSAYWTTNSGAPVWNNNNALTVGHRGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEVTHDVSQLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVGNNMPVFFIRDGMKFPDMVHAFKPSSKTNMQENWRVVDFFSHHPESLHMFTFLFD 191
[Close]
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_CAPAN (Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 7.376e-83
Identity = 147/191 (76.96%), Postives = 165/191 (86.39%), Query Frame = 1 
Query:   88 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFD 660
            MD  K  PS+ +++PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THDISHLTCAD  RAPGVQTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WRILDF S LPESL TF++F+D
Sbjct:    1 MDLSKYRPSSAYDSPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFVRERIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGVQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYD 191
[Close]
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 9.633e-83
Identity = 143/191 (74.87%), Postives = 159/191 (83.25%), Query Frame = 1 
Query:   88 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFD 660
            MDP K  PS++ +    TTN G PVWNDN +LTVG RGP+LLEDYHL+EK+AHFAR+ IPE  VHA  ASAKGFFECTHD++ LTCAD   +PG  TPVIVRFSTVIHERGSPET+RDPRGFAVKFYTREGNWDLLGN+ PVFFIRD IKFPDVIHAFKPNPKSH+QEYWR+ DF  H PESL TF + FD
Sbjct:    1 MDPCKFRPSSSFDTKTTTTNPGQPVWNDNEALTVGPRGPILLEDYHLLEKIAHFARD-IPEPFVHAGRASAKGFFECTHDVTGLTCADFLPSPGAGTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPKSHVQEYWRVFDFLPHHPESLHTFFFLFD 190
[Close]
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_SOLME (Catalase OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.146e-82
Identity = 146/191 (76.44%), Postives = 164/191 (85.86%), Query Frame = 1 
Query:   88 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFD 660
            MD  K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDYHL+EKLA F RERIPERVVHARGASAKGFFE THD+SHLTCAD  RAPGVQTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WRILDF S LPESL TF++F+D
Sbjct:    1 MDLSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYHLIEKLATFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYD 191
[Close]
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 3.661e-82
Identity = 145/191 (75.92%), Postives = 164/191 (85.86%), Query Frame = 1 
Query:   88 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFD 660
            MDP K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDY+L+EKLA F RE+IPERVVHARGASAKGFFE THDISHLTCAD  RAPG QTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WRILDF S LPESL TF++F+D
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYD 191
[Close]
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 3.661e-82
Identity = 145/191 (75.92%), Postives = 164/191 (85.86%), Query Frame = 1 
Query:   88 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFD 660
            MDP K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDY+L+EKLA F RE+IPERVVHARGASAKGFFE THDISHLTCAD  RAPG QTPVI RFSTV+HERGSPE++RD RGFAVKFYTREGN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WRILDF S LPESL TF++F+D
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFAVKFYTREGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQENWRILDFFSFLPESLHTFAFFYD 191
The following BLAST results are available for this feature:
BLAST of FC920854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA1_CUCPE1.436e-8679.06Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA2_CUCPE3.199e-8675.39Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ... [more]
CATA1_HORVU1.588e-8575.39Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2... [more]
CATA1_TOBAC3.537e-8578.53Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA2_WHEAT1.344e-8474.87Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1[more]
CATA_CAPAN7.376e-8376.96Catalase OS=Capsicum annuum GN=CAT PE=2 SV=1[more]
CATA_SECCE9.633e-8374.87Catalase OS=Secale cereale PE=2 SV=1[more]
CATA_SOLME2.146e-8276.44Catalase OS=Solanum melongena PE=2 SV=1[more]
CATA2_SOLTU3.661e-8275.92Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_SOLLC3.661e-8275.92Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]

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Properties
Property NameValue
Genbank descriptionC32013H02EF RVDevelop1 Citrus clementina cDNA clone C32013H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920854 ID=FC920854; Name=FC920854; organism=Citrus clementina; type=EST; length=661bp
AACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATAAT
AATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTACA
AATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATGCC
GGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGAGG
TCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTTTG
CCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCT
AAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCTGA
TCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCA
CTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGGA
TTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTAA
CAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTGA
TCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAGG
ATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCTG
GTTCTTTGATG
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