FC920854

Overview
NameFC920854
Unique NameFC920854
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:4..664. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.302e-79
Identity = 141/191 (73.82%), Postives = 160/191 (83.77%), Query Frame = 1
Query:   88 MDPYKLLPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFD 660
            MDP K  PS+ ++ PF+TTNAG PV+N+  SLTVG RGPVLLEDY+L+EKLA F RE+IPERVVHARGASAKGFFE THDISHLTCAD  RAPG QTPVI RFSTV+HERGSPE++RD RGF VKFY R GN+DL+GN++PVFF RDA  FPD I A KPNPKSHIQE WR LDF S LPESL TF++F+D
Sbjct:    1 MDPSKYRPSSAYDTPFLTTNAGGPVYNNVSSLTVGPRGPVLLEDYYLIEKLATFDREKIPERVVHARGASAKGFFEVTHDISHLTCADFLRAPGAQTPVICRFSTVVHERGSPESIRDIRGFGVKFYNRGGNFDLVGNNVPVFFNRDAKSFPDTIRALKPNPKSHIQEDWRTLDFFSFLPESLHTFAFFYD 191          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_VIBPA (Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=3 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.023e-56
Identity = 104/184 (56.52%), Postives = 133/184 (72.28%), Query Frame = 1
Query:  106 LPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            L ST+  A  +T + GAPV ++ +S+T G  G VLL+D HL++KL  FARERIPERVVHARG  A G F  + D S LT +  F   G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GNWDL+GN++PVFFIRD+IKFPD++H+ KP+P +++Q+  R  DF SH P +    +W +
Sbjct:   14 LASTSLQAQTLTRDNGAPVGDNQNSITAGENGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTVSAPFTEKGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNVQDPNRFFDFFSHEPSATHMLTWVY 197          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_VIBCH (Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 2.236e-55
Identity = 102/177 (57.63%), Postives = 130/177 (73.45%), Query Frame = 1
Query:  127 APFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            A  +T + GAPV ++ +S+T G  G VLL+D HL++KL  FARERIPERVVHARG  A G F  + D S LT +  F + G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GNWDL+GN++PVFFIRD+IKFPD++H+ KP+P +++Q+  R  DF SH P S    +W +
Sbjct:   21 AQTLTRDNGAPVGDNQNSITAGEHGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTLSAPFTSKGKITPVFVRFSTVIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSHEPGSTHMLTWVY 197          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_VIBVY (Catalase OS=Vibrio vulnificus (strain YJ016) GN=VVA0294 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.982e-55
Identity = 102/184 (55.43%), Postives = 133/184 (72.28%), Query Frame = 1
Query:  106 LPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            L S + +A  +T + GAPV ++ +S+T G  G VLL+D HL++KL  FARERIPERVVHARG  A G F  + D S LT +  F   G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GNWDL+GN++PVFFIRD+IKFPD++H+ KP+P +++Q+  R  DF S  P + +  +W +
Sbjct:   14 LASISVHAQTLTRDNGAPVGDNQNSITAGENGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVASGDFSDLTLSSPFAQSGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTDQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSSQPSATNMLTWVY 197          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_VIBVU (Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 6.507e-55
Identity = 102/184 (55.43%), Postives = 133/184 (72.28%), Query Frame = 1
Query:  106 LPSTTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            L S + +A  +T + GAPV ++ +S+T G  G VLL+D HL++KL  FARERIPERVVHARG  A G F  + D S LT +  F   G  TPV VRFSTVIH +GSPETLRDPRGFA KFYT +GNWDL+GN++PVFFIRD+IKFPD++H+ KP+P +++Q+  R  DF S  P + +  +W +
Sbjct:   14 LASISVHAQTLTRDNGAPVGDNQNSITAGENGSVLLQDVHLIQKLQRFARERIPERVVHARGTGAHGEFVVSGDFSDLTLSSPFAQSGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYTDQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSSQPSATNMLTWVY 197          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_LISIN (Catalase OS=Listeria innocua GN=kat PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.227e-53
Identity = 101/174 (58.05%), Postives = 128/174 (73.56%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            +TTN G PV ++ +S+T G +GP LLEDY L+EKLAHF RER+PERVVHARGA A G F     +   T A+  +  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D +GN++PVFFIRDAIKFPDVIH+ KP+P+++IQ+  R  DF S  PE+ +   + F
Sbjct:    7 LTTNQGTPVGDNQNSMTAGLKGPTLLEDYVLIEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTIANFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLSPEATTMIMYLF 180          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_LISSE (Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.603e-53
Identity = 100/174 (57.47%), Postives = 128/174 (73.56%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            +TTN G P+ ++ +S+T G +GP LLEDY L+EKLAHF RER+PERVVHARGA A G F     +   T A   +  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D +GN++PVFFIRDAIKFPDVIH+ KP+P+++IQ+  R  DF S  PE+ +  ++ F
Sbjct:    7 LTTNQGVPIGDNQNSMTAGLKGPTLLEDYVLIEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTKAQFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLTPEATTMITYLF 180          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_LISMO (Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.093e-53
Identity = 100/174 (57.47%), Postives = 127/174 (72.99%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            +TTN G PV ++ +S+T G +GP L+EDY L+EKLAHF RER+PERVVHARGA A G F     +   T A   +  G +T V  RFSTVIH + SPETLRDPRGF+VKFYT EGN+D +GN++PVFFIRDAIKFPDVIH+ KP+P+++IQ+  R  DF S  PE+ +   + F
Sbjct:    7 LTTNQGVPVGDNQNSMTAGRKGPTLIEDYVLIEKLAHFDRERVPERVVHARGAGAHGKFVTKKSMKKYTMAKFLQEEGTETEVFARFSTVIHGQHSPETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGNRYWDFFSLTPEATTMIMYLF 180          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_BACSU (Vegetative catalase OS=Bacillus subtilis GN=katA PE=1 SV=5)

HSP 1 Score: 207.994 bits (528), Expect = 3.570e-53
Identity = 99/167 (59.28%), Postives = 128/167 (76.65%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            +TT+ GAPV ++ +S+T GSRGP L++D HL+EKLAHF RER+PERVVHA+GA A G+FE T+D++  T A      G +TP+ +RFSTV  E GS +T+RDPRGFAVKFYT EGN+D++GN+ PVFFIRDAIKFPD IH  K +PK+H++    + DF S  PESL
Sbjct:    6 LTTSWGAPVGDNQNSMTAGSRGPTLIQDVHLLEKLAHFNRERVPERVVHAKGAGAHGYFEVTNDVTKYTKAAFLSEVGKRTPLFIRFSTVAGELGSADTVRDPRGFAVKFYTEEGNYDIVGNNTPVFFIRDAIKFPDFIHTQKRDPKTHLKNPTAVWDFWSLSPESL 172          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_TOXGO (Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.039e-52
Identity = 96/176 (54.55%), Postives = 129/176 (73.30%), Query Frame = 1
Query:  130 PFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            P +TT+AG PV ++ +S+T G  GP +L ++HL++KLAHF RERIPERVVHA+G  A G+FE THDI+    A LF   G +TPV  RFSTV  E GS +T RDPRGFA+KFYT EGNWD++GN+ P+FF+RDAIKFPD IH  K +P++H+ +   + DF S +PES+   ++ +
Sbjct:   14 PVITTSAGNPVDDNQNSVTAGPYGPAILSNFHLIDKLAHFDRERIPERVVHAKGGGAFGYFEVTHDITRFCKAKLFEKIGKRTPVFARFSTVAGESGSADTRRDPRGFALKFYTEEGNWDMVGNNTPIFFVRDAIKFPDFIHTQKRHPQTHLHDPNMVWDFFSLVPESVHQVTFLY 189          
The following BLAST results are available for this feature:
BLAST of FC920854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA1_SOLTU1.302e-7973.82Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA_VIBPA2.023e-5656.52Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=... [more]
CATA_VIBCH2.236e-5557.63Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2[more]
CATA_VIBVY4.982e-5555.43Catalase OS=Vibrio vulnificus (strain YJ016) GN=VV... [more]
CATA_VIBVU6.507e-5555.43Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=... [more]
CATA_LISIN1.227e-5358.05Catalase OS=Listeria innocua GN=kat PE=3 SV=1[more]
CATA_LISSE1.603e-5357.47Catalase OS=Listeria seeligeri GN=kat PE=3 SV=1[more]
CATA_LISMO2.093e-5357.47Catalase OS=Listeria monocytogenes GN=kat PE=3 SV=... [more]
CATA_BACSU3.570e-5359.28Vegetative catalase OS=Bacillus subtilis GN=katA P... [more]
CATA_TOXGO1.039e-5254.55Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC32013H02EF RVDevelop1 Citrus clementina cDNA clone C32013H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920854 ID=FC920854; Name=FC920854; organism=Citrus clementina; type=EST; length=661bp
AACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATAAT
AATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTACA
AATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATGCC
GGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGAGG
TCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTTTG
CCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCT
AAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCTGA
TCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCA
CTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGGA
TTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTAA
CAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTGA
TCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAGG
ATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCTG
GTTCTTTGATG
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