FC920854

Overview
NameFC920854
Unique NameFC920854
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15452 contig Ccv1_Contig15452:4..664. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_RANRU (Catalase OS=Rana rugosa GN=cat PE=2 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 1.834e-49
Identity = 94/174 (54.02%), Postives = 126/174 (72.41%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            +TT  G PV +  + LTVG RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL GN+ P+FF+RDA+ FP  IH+ K NP++H+++   + DF +  PESL   S+ F
Sbjct:   27 LTTGGGNPVSDKLNLLTVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEFIGKRTPIAVRFSTVAGEAGSADTVRDPRGFAVKFYTEDGNWDLTGNNTPIFFVRDAMLFPSFIHSQKRNPQTHMKDPDMVWDFWALRPESLHQVSFLF 200          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_HELPJ (Catalase OS=Helicobacter pylori J99 GN=katA PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.834e-49
Identity = 96/171 (56.14%), Postives = 122/171 (71.35%), Query Frame = 1
Query:  139 TTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSW 651
            TT  GAPVW+DN+ +T G RGPVLL+    +EKLA F RERIPERVVHA+G+ A G F  T DI+  T A +F   G +T    RFSTV  E+GS + +RDPRGFA+K+YT EGNWDL+GN+ PVFFIRDAIKFPD IH  K +P++++     + DF S++PESL   +W
Sbjct:    9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGEKGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNPDMVWDFWSNVPESLYQVTW 179          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 1.834e-49
Identity = 96/169 (56.80%), Postives = 124/169 (73.37%), Query Frame = 1
Query:  130 PF-MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPES 633
            PF +TT+ GAP++N   SLTVG RGP+LL+D   ++++AHF RERIPERVVHA+G  A GFFE T DI+    AD+F   G +TP+ +RFSTV  E GS +T RDPRGFA+KFYT EGNWDL+GN+ P+FFIRD I FP+ IH  K NP +H+++   + DF S  PE+
Sbjct:   23 PFVLTTSNGAPIFNKKASLTVGPRGPLLLQDVVFLDEMAHFDRERIPERVVHAKGGGAHGFFEVTDDITKYCKADVFSTIGKRTPIFIRFSTVGGELGSADTQRDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIFFPNFIHTQKRNPVTHLKDPNMMWDFFSLRPET 191          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 195.282 bits (495), Expect = 2.395e-49
Identity = 92/174 (52.87%), Postives = 126/174 (72.41%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            +TT  G P+ +  + +T G RGP+L++D    +++AHF RERIPERVVHA+GA A G+FE THDI+  + A +F   G +TP+ VRFSTV  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDA+ FP  IH+ K NP++H+++   + DF S  PESL   ++ F
Sbjct:   27 LTTGGGNPIGDKLNIMTAGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAMLFPSFIHSQKRNPQTHLKDPDMVWDFWSLCPESLHQVTFLF 200          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_PSEPU (Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.395e-49
Identity = 97/174 (55.75%), Postives = 123/174 (70.69%), Query Frame = 1
Query:  136 MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 657
            +TT +GAPV ++ +S + G RGP+LL+D+HL+EKLAHF RE IPER VHA+G+ A G F  T DI+  T A LF   G QT   +RFSTV  ERGS +T RDPRGFAVKFYT EGNWD++GN+ PVFFIRD +KFPD IH  K +P+S+++      D  SH PE+L   +  F
Sbjct:    5 LTTASGAPVADNQNSRSAGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVTRDITGYTSAKLFEQVGKQTETFLRFSTVGGERGSADTERDPRGFAVKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRHPQSNLKNAQIFWDSWSHSPEALHQVTILF 178          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_LACSK (Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.395e-49
Identity = 98/168 (58.33%), Postives = 122/168 (72.62%), Query Frame = 1
Query:  136 MTTNAGAPVWNDN-HSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            +TTN G P W DN HS T G RGPVL++DY L+EKLAHF RERIPERVVHA+GA AKG+F+ T D+S  T A +F   G +TP+I RFS V  E G P+T RD RGFAVKFYT EGN+D++GN+ PVFF+ D +KFPD IH+ K +P++H +      DF S  PES+
Sbjct:    5 LTTNEGQP-WADNQHSQTAGQRGPVLIQDYQLLEKLAHFNRERIPERVVHAKGAGAKGYFKVTKDMSAYTKAAVFSGVGKKTPLITRFSQVAGEAGYPDTYRDVRGFAVKFYTEEGNYDIVGNNTPVFFVNDPLKFPDFIHSQKRDPRTHARSQDMQWDFWSLSPESV 171          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATE_BACSU (Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.128e-49
Identity = 97/186 (52.15%), Postives = 122/186 (65.59%), Query Frame = 1
Query:  115 TTHNAPFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE-------YWRILDFCSHLPESLSTFSW 651
            T ++   MTTN G  V  D HSL  G RGP L+ED+H  EK+ HF  ERIPERVVHARG    GFF+    ++  T A   + P V+TPV VRFSTV   +GS +T+RD RGFA KFYT EGN+DL+GN+IPVFFI+DAIKFPD++HAFKP P + + +       +W   DF ++ PES     W
Sbjct:   23 TDNSGKKMTTNQGLRVSEDEHSLKAGVRGPTLMEDFHFREKMTHFDHERIPERVVHARGFGVHGFFQVYEPMTEYTRAKFLQDPSVKTPVFVRFSTVAGSKGSADTVRDARGFATKFYTEEGNYDLVGNNIPVFFIQDAIKFPDLVHAFKPEPHNEMPQAATAHDTFW---DFVANNPESAHMVMW 205          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_BRUSU (Catalase OS=Brucella suis GN=katA PE=3 SV=3)

HSP 1 Score: 193.356 bits (490), Expect = 9.100e-49
Identity = 94/169 (55.62%), Postives = 123/169 (72.78%), Query Frame = 1
Query:  130 PFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            P MTT+AGAP+ ++ +SLT G RGP+L++DY L+EKL+H  RERIPER VHA+G  A G    T DIS  T A + + PG QTP++ RFSTV  E G+ +  RD RGFA+KFYT+EGNWDL+GN+ PVFF+RD +KFPD IH  K +P++H++    + DF S  PESL
Sbjct:    5 PIMTTSAGAPIPDNQNSLTAGERGPILMQDYQLIEKLSHQNRERIPERAVHAKGWGAYGTLTITGDISRYTKAKVLQ-PGAQTPMLARFSTVAGELGAADAERDVRGFALKFYTQEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTHLRSATAMWDFWSLSPESL 172          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_BRUME (Catalase OS=Brucella melitensis GN=katA PE=3 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 9.100e-49
Identity = 94/169 (55.62%), Postives = 123/169 (72.78%), Query Frame = 1
Query:  130 PFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            P MTT+AGAP+ ++ +SLT G RGP+L++DY L+EKL+H  RERIPER VHA+G  A G    T DIS  T A + + PG QTP++ RFSTV  E G+ +  RD RGFA+KFYT+EGNWDL+GN+ PVFF+RD +KFPD IH  K +P++H++    + DF S  PESL
Sbjct:    5 PIMTTSAGAPIPDNQNSLTAGERGPILMQDYQLIEKLSHQNRERIPERAVHAKGWGAYGTLTITGDISRYTKAKVLQ-PGAQTPMLARFSTVAGELGAADAERDVRGFALKFYTQEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTHLRSATAMWDFWSLSPESL 172          
BLAST of FC920854 vs. ExPASy Swiss-Prot
Match: CATA_BRUAB (Catalase OS=Brucella abortus GN=katA PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 9.100e-49
Identity = 94/169 (55.62%), Postives = 123/169 (72.78%), Query Frame = 1
Query:  130 PFMTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 636
            P MTT+AGAP+ ++ +SLT G RGP+L++DY L+EKL+H  RERIPER VHA+G  A G    T DIS  T A + + PG QTP++ RFSTV  E G+ +  RD RGFA+KFYT+EGNWDL+GN+ PVFF+RD +KFPD IH  K +P++H++    + DF S  PESL
Sbjct:    5 PIMTTSAGAPIPDNQNSLTAGERGPILMQDYQLIEKLSHQNRERIPERAVHAKGWGAYGTLTITGDISRYTKAKVLQ-PGAQTPMLARFSTVAGELGAADAERDVRGFALKFYTQEGNWDLVGNNTPVFFVRDPLKFPDFIHTQKRHPRTHLRSATAMWDFWSLSPESL 172          
The following BLAST results are available for this feature:
BLAST of FC920854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_RANRU1.834e-4954.02Catalase OS=Rana rugosa GN=cat PE=2 SV=3[more]
CATA_HELPJ1.834e-4956.14Catalase OS=Helicobacter pylori J99 GN=katA PE=3 S... [more]
CATA_ASCSU1.834e-4956.80Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATA_RAT2.395e-4952.87Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]
CATA_PSEPU2.395e-4955.75Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1[more]
CATA_LACSK2.395e-4958.33Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2[more]
CATE_BACSU3.128e-4952.15Catalase-2 OS=Bacillus subtilis GN=katE PE=3 SV=2[more]
CATA_BRUSU9.100e-4955.62Catalase OS=Brucella suis GN=katA PE=3 SV=3[more]
CATA_BRUME9.100e-4955.62Catalase OS=Brucella melitensis GN=katA PE=3 SV=2[more]
CATA_BRUAB9.100e-4955.62Catalase OS=Brucella abortus GN=katA PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC32013H02EF RVDevelop1 Citrus clementina cDNA clone C32013H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920854 ID=FC920854; Name=FC920854; organism=Citrus clementina; type=EST; length=661bp
AACTCTTCTTGAGTCTCGACTCAACTCCACTTCTCCTTTCTTACGATAAT
AATAACAGTAGCAAAATCTTCAGCAAGAAATATCGCCATGGATCCCTACA
AATTGCTTCCGTCAACTACTCACAATGCCCCCTTTATGACTACAAATGCC
GGCGCTCCTGTCTGGAACGACAATCACTCCTTGACTGTTGGAAGTAGAGG
TCCTGTCCTTCTTGAGGATTATCATCTGGTGGAGAAACTAGCTCATTTTG
CCAGGGAGAGGATTCCAGAACGTGTCGTCCATGCTAGGGGAGCCAGTGCT
AAGGGTTTCTTTGAGTGCACCCATGATATTTCTCACCTTACTTGTGCTGA
TCTTTTTCGAGCTCCAGGGGTTCAGACACCTGTCATTGTTCGCTTCTCCA
CTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGGA
TTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTAA
CAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTGA
TCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAGG
ATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCTG
GTTCTTTGATG
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