FC920855

Overview
NameFC920855
Unique NameFC920855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1194..1921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_NATPD (Gamma-glutamyl phosphate reductase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=proA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.568e-45
Identity = 99/236 (41.95%), Postives = 145/236 (61.44%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL----KIPETRLFHHEYNSMVCTVEIVDDVRAAID 696
            G+ L   +L DGL L K S P+GV+  VFESRPDALVQIA+L++RSGN ++LKGG EA  SN +L+++I  A  D + +    L+ +RE++              PRGS+  VS I+++T IPVLGH +G+CHVYVD +A+LD+A +I  DAK+ YPA CNA+ETLLVH+D+A    L ++        V + G      +L    +      +  EY  ++  +++VD + +AID
Sbjct:   98 GKTLTARELDDGLDLYKVSVPIGVIGTVFESRPDALVQIAALSLRSGNAVILKGGSEASHSNRVLYEIIREATAD-LPDGWAQLIEAREDVDRLLGMDDSVDLLMPRGSSAFVSYIQDNTSIPVLGHTEGVCHVYVDDAADLDMATDIAYDAKVQYPAVCNAVETLLVHEDVA-EEYLPDIAARYAEADVEMRGDEATRSVLDRDIEAATDDDWTSEYGDLIVAIKVVDSLESAID 331          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_CYAP4 (Gamma-glutamyl phosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=proA PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.568e-45
Identity = 107/245 (43.67%), Postives = 157/245 (64.08%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSN----AILHKVITSA--IPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAIDIFITW 711
            G +  + +L  GLIL++ +CPLGVL ++FE+RPDA+VQI++LAI+SGNG+LLKGG+EA+ S     A +H+ + SA   PD+     I L+TSREE               PRGSN  V  ++E T+IPVLGHA+GICH+YVD++A+L+ A  I IDAK  YPAACNA+ETLLVH+ +A    L +L   LQ   V L G     +++ +       +  EY+ ++ ++++V D+ +AI+   T+
Sbjct:   99 GAVQLQRELDTGLILKRMTCPLGVLGVIFEARPDAVVQISALAIKSGNGVLLKGGQEALHSCKALVAAIHQGLASAGLNPDS-----IALLTSREETLALLELDQQVDLIIPRGSNAFVRFVQEHTRIPVLGHAEGICHLYVDQTADLEQAVQIAIDAKTQYPAACNAIETLLVHRAIAPQ-FLPQLATALQALKVELRGDELTREIIPVAPAAESDWATEYSDLILSIKVVADLESAINHINTY 337          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PROM3 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9303) GN=proA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.609e-44
Identity = 98/229 (42.79%), Postives = 147/229 (64.19%), Query Frame = 1
Query:   22 DLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAID 696
            +L   L+LE+ + PLGVL ++FE+RPDA++QIASLAIRSGNG LLKGG EA  +N  + + + + + +T +  + I L+T+R+E               PRGSN+LV  I+++T+IPVLGHADGICH+Y+D +A+L  A  I ID+K  YPAACNA+ETLL+H+ +A   +  EL +    +      G  AS+ L + E+     +  EY  ++ +V++V D+  A+D
Sbjct:  110 ELDQDLVLERITVPLGVLGVIFEARPDAVIQIASLAIRSGNGALLKGGSEASHTNQAIIEALKNGLAETEIDPEAIALLTTRQESLALLRLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGICHLYLDAAADLKQALQIAIDSKTQYPAACNAIETLLIHQSIA--PSFLELAIPAFRQARVRLLGDSASRALGVEESASEEDWATEYLDLILSVKVVPDLEGALD 336          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SYNP6 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=proA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.713e-44
Identity = 101/234 (43.16%), Postives = 145/234 (61.97%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGE-KLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL--LKIPETRLFHHEYNSMVCTVEIVDDVRAAI 693
            GQI    +L +GLIL++ +CP+GVL ++FE+RPDA++QIASLAI+SGNG +LKGG+EA+ S   +   I  A+ +     + I L+TSREE               PRGSN  V  ++++T IPVLGHADGICH+YVD++A ++    I +DAK  YPAACNA+ETLL+H+ +A    L  +   L  +GV L G   A  +  ++      +  EY+ +V  V +V  + AAI
Sbjct:   97 GQIQIDRELDEGLILQRLTCPVGVLGVIFEARPDAVIQIASLAIKSGNGAILKGGREAICSCQAIVAAIAQALAEQQAPVEAIRLLTSREETLALLKLDRYVDLIIPRGSNSFVRFVQDNTHIPVLGHADGICHLYVDQAAAIEKTVTITVDAKTQYPAACNAIETLLIHEAIAPQ-FLPVVAAALHEKGVSLRGDAAAQTIVPMEAATEEDWRTEYSDLVLAVRLVPSLDAAI 329          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SYNE7 (Gamma-glutamyl phosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=proA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.713e-44
Identity = 101/234 (43.16%), Postives = 145/234 (61.97%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGE-KLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL--LKIPETRLFHHEYNSMVCTVEIVDDVRAAI 693
            GQI    +L +GLIL++ +CP+GVL ++FE+RPDA++QIASLAI+SGNG +LKGG+EA+ S   +   I  A+ +     + I L+TSREE               PRGSN  V  ++++T IPVLGHADGICH+YVD++A ++    I +DAK  YPAACNA+ETLL+H+ +A    L  +   L  +GV L G   A  +  ++      +  EY+ +V  V +V  + AAI
Sbjct:   97 GQIQIDRELDEGLILQRLTCPVGVLGVIFEARPDAVIQIASLAIKSGNGAILKGGREAICSCQAIVAAIAQALAEQQAPVEAIRLLTSREETLALLKLDRYVDLIIPRGSNSFVRFVQDNTHIPVLGHADGICHLYVDQAAAIEKTVTITVDAKTQYPAACNAIETLLIHEAIAPQ-FLPVVAAALHEKGVSLRGDAAAQTIVPMEAATEEDWRTEYSDLVLAVRLVPSLDAAI 329          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SYNJA (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain JA-3-3Ab) GN=proA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44
Identity = 102/236 (43.22%), Postives = 149/236 (63.14%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT--VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--IPETR-LFHHEYNSMVCTVEIVDDVRAAI 693
            GQ L   +L +GL+LE+ + PLGVL ++FESRPDALVQIA+LA+++GN +LLKGG E + S   L   I + +       +  + L+TSR E+              PRGS+  V  I E+T+IPVLGHADG+CH+YVD++A++D+A  + +D+K  YPAACNA+ETLLVH ++A    L   V  L+ +GV L G PR  +L+   IP T   +  EY  ++ ++++V  +  AI
Sbjct:  112 GQALLIRELDEGLVLERRTYPLGVLGVIFESRPDALVQIAALAVKTGNSVLLKGGSEGLCSCQALMAAIQAGLQQIPEFPQGSLQLLTSRAEVKALLQLEGLVDLIIPRGSSSFVRYIMENTRIPVLGHADGLCHLYVDRAADVDMAVRLTLDSKTQYPAACNAIETLLVHAEIAPR-FLPLAVQALREKGVELRGDPRCRQLVPDLIPATEDDWSTEYADLILSIKVVGSLDEAI 346          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SYNJB (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. GN=proA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.791e-43
Identity = 103/236 (43.64%), Postives = 150/236 (63.56%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT--VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--IPETR-LFHHEYNSMVCTVEIVDDVRAAI 693
            G+ L   +L +GLILE+ + PLGVL ++FESRPDALVQIA+LA+++GN +LLKGG EA+ S   L   I + +       +  + L+TSR E+              PRGS+  V  I E+T+IPVLGHADG+CH+YVD++A++D+A  + +D+K  YPAACNA+ETLLVHK +A +  L   V  L+ +GV L G P   +L+   IP T   +  EY  ++ ++++V  +  AI
Sbjct:  112 GRALLIRELDEGLILERRTYPLGVLGVIFESRPDALVQIAALAVKTGNSVLLKGGSEALLSCQALMAAIQAGLQQIPEFPQGSLQLLTSRAEVKALLQLEGLVDLIIPRGSSSFVRYILENTRIPVLGHADGLCHLYVDRAADVDMAIKLTVDSKTQYPAACNAIETLLVHKAIAPH-FLPLAVKALREKGVELRGDPLCRELVPDLIPATEDDWSTEYADLILSIKVVGSLDEAI 346          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SYNS3 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9311) GN=proA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.990e-43
Identity = 102/229 (44.54%), Postives = 142/229 (62.01%), Query Frame = 1
Query:   22 DLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAID 696
            +LADGL+LE+ + PLGVL ++FE+RPDA++QIA+LAIRSGNG +LKGG EA  +N  + + +   +  T V    + L+T+R E               PRGSN+LV  I+++T+IPVLGHADG+CH+YVD+  +   A  I ID+K  YPAACNA+ETLLVH+ +A    L E V   Q  GV L  G  AS+ L + +      +  EY  +V  V +V D   A++
Sbjct:  109 ELADGLVLERVTVPLGVLGVIFEARPDAVIQIAALAIRSGNGAILKGGSEAKCTNQAVMQSLKEGLAGTSVSVDALDLLTTRAESLALLRLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGVCHLYVDQEVDCTQALRIAIDSKTQYPAACNAIETLLVHEKIA-PIFLKEAVPAFQEAGVCL-RGDEASRDLGVEQVATSDDWSQEYLDLVLAVRVVKDFDEALE 335          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SYNR3 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain RCC307) GN=proA PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 5.211e-43
Identity = 101/231 (43.72%), Postives = 144/231 (62.34%), Query Frame = 1
Query:   25 LADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRS-NAILHKVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDL------ACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAID 696
            L +GL+LE+ S PLGV+ ++FE+RPDA++QIA+LAIRSGNG +LKGG+EA RS +AIL  +        V   ++ L+TSREE               PRGSN LV  I+++T+IPVLGHADGICH+YVD+  +LD A  + +D+K  YPAACNA+ETLL+HK++      A   A  +  VEL+ +G  +  G   S          +  EY  +V ++ +VD +  A++
Sbjct:  118 LDEGLVLERISVPLGVVGVIFEARPDAVMQIAALAIRSGNGAILKGGREANRSCSAILAALQQGLARSAVHPDVLTLLTSREESLALLKLDGLVDLIIPRGSNALVQFIQDNTRIPVLGHADGICHLYVDRQVDLDQAVAVAVDSKAQYPAACNAIETLLLHKEIAPAFLAAALPAFAQAGVELRGDGAAMALGVSQS-----ASDDDWATEYLDLVLSIRVVDSMDEALE 343          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PROMM (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=proA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.889e-43
Identity = 97/229 (42.36%), Postives = 145/229 (63.32%), Query Frame = 1
Query:   22 DLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAID 696
            +L   L+LE+ + PLGVL ++FE+RPDA++QI SLAIRSGNG LLKGG EA  +N  + + + + + +T +  + I L+ +R+E               PRGSN+LV  I+++T+IPVLGHADGICH+Y+D +A+L  A  I ID+K  YPAACN++ETLL+H+ +A    L   +      GV L  G  AS+ L + E+     +  EY  ++ +V++V D+  A+D
Sbjct:  110 ELDQDLVLERITVPLGVLGVIFEARPDAVIQITSLAIRSGNGALLKGGSEASHTNQAIIEALKNGLAETEIDPEAIALLKTRQESLALLRLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGICHLYLDAAADLKQALQIAIDSKTQYPAACNSIETLLIHQSIA-PSFLELAIPAFLQAGVRLL-GDSASRALGVEESASEEDWATEYLDLILSVKVVPDLEGALD 336          
The following BLAST results are available for this feature:
BLAST of FC920855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_NATPD5.568e-4541.95Gamma-glutamyl phosphate reductase OS=Natronomonas... [more]
PROA_CYAP45.568e-4543.67Gamma-glutamyl phosphate reductase OS=Cyanothece s... [more]
PROA_PROM33.609e-4442.79Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_SYNP64.713e-4443.16Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SYNE74.713e-4443.16Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SYNJA8.040e-4443.22Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SYNJB1.791e-4343.64Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SYNS33.990e-4344.54Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SYNR35.211e-4343.72Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_PROMM8.889e-4342.36Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]

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Properties
Property NameValue
Genbank descriptionC32013H03EF RVDevelop1 Citrus clementina cDNA clone C32013H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920855 ID=FC920855; Name=FC920855; organism=Citrus clementina; type=EST; length=728bp
GGTCAAATTTTAAAGAGAACAGACCTTGCGGATGGACTCATCCTGGAGAA
AACATCATGTCCTTTGGGCGTCCTCTTGATAGTATTTGAATCTCGACCTG
ATGCCCTGGTCCAGATAGCTTCATTGGCCATTCGGAGTGGAAATGGTCTA
CTACTGAAAGGAGGAAAAGAAGCTATGCGGTCAAATGCAATCTTGCACAA
GGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAACTTATTGGAC
TTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTTGATGATGTG
ATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTTGTTTCTCAAATCAA
GGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAATTTGTCATG
TTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAACATTGTTATT
GATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGAAACTCTTCT
GGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTTGTTGTAG
AACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGAGCAAGTAAA
TTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTACAACTCAAT
GGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTATTGACATAT
TCATCACATGGAAGTGCCATACTGATGC
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