FC920855

Overview
NameFC920855
Unique NameFC920855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1194..1921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_CLOCE (Gamma-glutamyl phosphate reductase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=proA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.889e-43
Identity = 103/246 (41.87%), Postives = 150/246 (60.98%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSA-IPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI--PETRLFHHEYNSMVCTVEIVDDVRAAIDIFITW-KCHTD 726
            G+ L    L D L L K +CP+GV+ I+FESRPDALVQI++L ++SGN +LLKGG EA  +N +L  VI  A +   + +  IGL+ SR+++              PRGSN  V  I ++++IPV+GHADGICHVYVD+SA+L++AK I +D+K  Y A CNA ETLLV + +A    L  L  EL  + V +FG    + ++++     + +  EY   + +++IV  +  AI   IT+   HTD
Sbjct:   92 GKTLLANKLDDELELYKVTCPIGVIGIIFESRPDALVQISTLCLKSGNCVLLKGGSEAKETNRVLTGVIEEATVAAGLPKGWIGLLESRDDVNEMLKMDQFIDLIIPRGSNDFVRYIMDNSRIPVMGHADGICHVYVDESADLEMAKKITVDSKTQYVAVCNATETLLVDRAVA-KEFLPGLKAELDKKNVEIFGDEETADIIEVKPASDQDWATEYLDYIISIKIVAGMDEAIKHIITYGSGHTD 336          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SYNSC (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9605) GN=proA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.516e-42
Identity = 100/229 (43.67%), Postives = 141/229 (61.57%), Query Frame = 1
Query:   22 DLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAID 696
            +L  GL+LE+ S PLGV+ ++FE+RPDA++QIASLAIRSGNG LLKGG EA  +N A++  +        V    + L+T+R+E               PRGSN+LV  I+++T+IPVLGHADG+CH+YVD +A++  A  + +D+K  YPAACNA+ETLLVH+ +A    L   +      GV L  G   S  L + E      +  EY  ++  V++VDD+ AA D
Sbjct:  107 ELDQGLVLERVSVPLGVVGVIFEARPDAVMQIASLAIRSGNGALLKGGSEARCTNEAVMDALQAGLAASPVSADALALLTTRQESLALLRLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGVCHLYVDAAADIAKAVRVAVDSKSQYPAACNAIETLLVHRSIA-QPFLAAALPAFAAAGVKL-RGDAESVALGVAEAATEEDWSTEYLDLILAVKLVDDLEAATD 333          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PELTS (Gamma-glutamyl phosphate reductase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=proA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.516e-42
Identity = 103/246 (41.87%), Postives = 147/246 (59.76%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-KIPETRL-FHHEYNSMVCTVEIVDDVRAAIDIFITW-KCHTD 726
            G+ L  T+L DGL L K +CP+GV+ ++FESRPDALVQI++L ++SGNG+LLKGG EA  +N +L  +I  A     +    I L+ +R ++              PRGSN+ V  I ++++IPVLGHADGICH+YVD+ A++ +A  I +DAK  Y A CNA+ETLLVH+ +A    L EL   +    V L G PR   ++   P T   +  EY  +  +V++V  +  AI    T+   HTD
Sbjct:   92 GRTLLSTELDDGLELYKVTCPIGVIGVIFESRPDALVQISTLCLKSGNGVLLKGGSEARETNRVLAAIIAGATHKAGLPPDWIALLETRSDVGEMLKMDKYIDLIIPRGSNEFVRYIMDNSRIPVLGHADGICHLYVDEDADIQMAVKIAVDAKTQYVAVCNAVETLLVHEKIA-PAFLPELKKAMDARQVELIGCPRTRAVIPAAPATEEDWRTEYLDLKLSVKVVAGLDEAIGHINTYGSGHTD 336          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SYNPX (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain WH8102) GN=proA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.586e-42
Identity = 102/228 (44.74%), Postives = 138/228 (60.53%), Query Frame = 1
Query:   22 DLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGG--PRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAID 696
            +L  GL+LE+ S PLGV+ ++FE+RPDA+VQIASLAIRSGNG +LKGG EA  +N A++  +        V    + L+T+R+E               PRGSN+LV  I+++T+IPVLGHADGICH+YVD +A++D A  I ID+K  YPAACNA+ETLLVH  +A    L   V   Q  GV L G    R   +        +  EY  M+  V +V  + AA++
Sbjct:  107 ELDQGLVLERISVPLGVVGVIFEARPDAVVQIASLAIRSGNGAMLKGGSEARCTNEAVMEALKLGLGRSAVAPDALTLLTTRQESLALLRLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGICHLYVDAAADVDQAVRIAIDSKTQYPAACNAIETLLVHASIA-PAFLASAVPAFQAAGVTLRGDEHSRQHGISDAATDEDWRTEYLDMILAVRVVPSMDAALE 333          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_HALWD (Gamma-glutamyl phosphate reductase OS=Haloquadratum walsbyi (strain DSM 16790) GN=proA PE=3 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.586e-42
Identity = 95/242 (39.26%), Postives = 145/242 (59.92%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL----KIPETRL------FHHEYNSMVCTVEIVDDVRAAID 696
            G+ L   +L D L L K + P+GV+  VFESRPDALVQI++L+++SGN ++LKGG EA RSN +L+  I  A P+ V      L+ +RE++              PRGS+  V  ++++T IPVLGH +G+CHVYVD  A+L++A  +  DAK+ YPA CNA+ETLLVH+ +A    L++++ + +  GV + G  R   ++     I E  +      +  EY   + ++ +VD +  AID
Sbjct:  105 GETLTARELDDDLNLYKVTVPIGVIGTVFESRPDALVQISALSLKSGNAVILKGGSEAERSNRVLYNCILEATPE-VPSGWAQLIEAREDVQTLLEMDDAVDLIMPRGSSSFVQYVQDNTSIPVLGHTEGVCHVYVDSEADLEMATAVAYDAKVQYPAVCNAVETLLVHESVA-PSFLSQMMKQYRDAGVEIRGDERTQSIVDTESNISEEIIAATEADWTTEYGDRIVSIAVVDSLTDAID 344          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SYNS9 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9902) GN=proA PE=3 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.676e-41
Identity = 97/230 (42.17%), Postives = 139/230 (60.43%), Query Frame = 1
Query:   22 DLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP---DTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL--LKIPETRLFHHEYNSMVCTVEIVDDVRAAID 696
            +L   L+LE+ + PLGV+ ++FE+RPDA+VQIASLAIRSGNG LLKGG EA  +N  +   + + +      V    + L+T+REE               PRGSN+LV  I+++T+IPVLGHADG+CH+YVD +A++  A  + +D+K  YPAACNA+ETLLVH+ +A    L   V   Q  GV L G   +  L   +  +   +  EY  +  +V +VDD+  A +
Sbjct:  107 ELDTDLVLERITVPLGVVGVIFEARPDAVVQIASLAIRSGNGALLKGGSEARCTNEAVMDALRAGLAREESDVSPDALALLTTREESLGLLRLDGLVDLIIPRGSNELVRFIQDNTRIPVLGHADGVCHLYVDAAADVMKATRVAVDSKTQYPAACNAIETLLVHRSIA-TAFLAAAVPAFQAAGVTLRGDAESQSLGVNESAQEEDWSTEYLDLTLSVRVVDDLACATE 335          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_METMA (Gamma-glutamyl phosphate reductase OS=Methanosarcina mazei GN=proA PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.859e-41
Identity = 97/250 (38.80%), Postives = 144/250 (57.60%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVG--EKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK----IPETRL----FHHEYNSMVCTVEIVDDVRAAIDIFITWKCH 720
            G+ L   +L D LIL + SCP+G++ ++FESRPD + Q+ SL ++SGN  + KGG EA  SN  +  ++  AI  T G  E    L+ +REEI              PRGSN+ V  I+++TKIPVLGH  GICH+YVD+ A+ D A  +  DAK+ YPA CNA+ETLLV++++A    L ++       GV L     +  LL      P +R     +  EYN ++ ++++VD ++ A+D   T+  H
Sbjct:   98 GETLSTLELDDDLILYQVSCPIGLIGVIFESRPDVVPQVMSLCLKSGNATIFKGGSEARESNRTIFDILVRAIESTGGMPEGAFQLMETREEIMSLLSLDAYVDLLIPRGSNEFVKFIQDNTKIPVLGHTSGICHIYVDEFADPDTAWQVCFDAKVQYPAVCNAIETLLVNRNIA-EVFLPKMAEMYLKAGVELRCDEGSYSLLSEKGLSPLSRATDEDWSLEYNDLILSIKLVDTIKEAVDHINTFGSH 346          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_BRAHW (Gamma-glutamyl phosphate reductase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=proA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.878e-41
Identity = 89/234 (38.03%), Postives = 140/234 (59.83%), Query Frame = 1
Query:    4 QILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT--VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL---KIPETRLFHHEYNSMVCTVEIVDDVRAA 690
            ++L  T+L D L+L+K SCP+G++ ++FE+RPD + QI+SL I+S N ++LKGG E   +N  ++ +I   + +     +  + LV +RE+I              PRG N LV  IK +T IPVLGHADGICH+Y+D+SA+ + A  I +D+K  YP+ACNA+ET+LV+K++A +  L +L    +   + +       K+L    I E + +H EY     +++IV D   A
Sbjct:   97 KVLLETELDDNLLLKKISCPIGLIAVIFEARPDVISQISSLCIKSSNAVILKGGSEGENTNKAIYNIIEETLNNIKEFPKNSVNLVFTREDIKELLSMDKYIDLIIPRGGNSLVQYIKSNTNIPVLGHADGICHLYIDESADQEKALKICLDSKAQYPSACNAVETILVNKNIA-SEYLPKLYNLFKENEIKMNADAEVKKILTSSDIGEVKEWHFEYGDKEVSLKIVSDTEEA 329          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SCHPO (Probable gamma-glutamyl phosphate reductase OS=Schizosaccharomyces pombe GN=pro1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.370e-41
Identity = 97/254 (38.19%), Postives = 152/254 (59.84%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK-IPETRL---------FHHEYNSMVCTVEIVDDVRAAIDIFIT-WKCHTD 726
            G++     L DGL L K SCP+G+LL++FE+RP+ ++ I SLAI+SGN ++LKGG E+ +S A L  V+ SA+  + V +  + LV SREE+              PRGS  LV  IK++TKIPVLGHA G+C +YV + A++++A  +V+D K DYPAACNA+ETLL++ +   +  L ++   L    V L   P + K+LK +P+            ++ E++ ++  ++ V  +++A+    T    HTD
Sbjct:   97 GRVTYARSLDDGLDLYKVSCPVGLLLVIFEARPEVIINITSLAIKSGNAVVLKGGTESAKSFAALSNVVRSALGKSKVPQAAVQLVQSREEVSQLLKLDEYIDLVIPRGSTNLVRHIKDNTKIPVLGHAAGLCSMYVHEDADMELASKLVLDGKTDYPAACNAIETLLIN-EAVLSSHLPKIAETLTEAKVTLKCDPASLKVLKDMPKVSALVEPSVDQDYNTEFSDLILAIKTVPSLQSAMQHINTHGSKHTD 349          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_METBU (Gamma-glutamyl phosphate reductase OS=Methanococcoides burtonii (strain DSM 6242) GN=proA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.320e-41
Identity = 92/242 (38.02%), Postives = 143/242 (59.09%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVG--EKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGL-FGGPRASKLLKIPETRL-------FHHEYNSMVCTVEIVDDVRAAID 696
            G+ +   +L  GL L + S P+G++ ++FESRPD + Q+ SL ++SGN  + KGG EA+ SN ++  ++  A+ DT G  +    L+ +REE+              PRGSN  V  I+++TKI VLGHADGICHVYVD +A+L+ A ++  D+K+ YPA CNAMETLL+++++A    L E+V   +  GV L F     +   K+    +       +  EYN  + ++++VD +  AID
Sbjct:   98 GRTINTLELDKGLELYQVSSPIGLIGVIFESRPDVVPQVMSLCLKSGNATVFKGGSEALNSNRVIFNILVEALEDTPGIPKGAFQLMETREEVMDILALDEYIDLLIPRGSNDFVKFIQDNTKISVLGHADGICHVYVDTNADLNKAYDVCFDSKVQYPAVCNAMETLLINREIA-EEFLPEMVRRYEEVGVELRFDEGSYAIAEKLGSANIAKATEDDWKTEYNDFILSIKLVDSIEEAID 338          
The following BLAST results are available for this feature:
BLAST of FC920855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_CLOCE8.889e-4341.87Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_SYNSC1.516e-4243.67Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_PELTS1.516e-4241.87Gamma-glutamyl phosphate reductase OS=Pelotomaculu... [more]
PROA_SYNPX2.586e-4244.74Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_HALWD2.586e-4239.26Gamma-glutamyl phosphate reductase OS=Haloquadratu... [more]
PROA_SYNS91.676e-4142.17Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_METMA2.859e-4138.80Gamma-glutamyl phosphate reductase OS=Methanosarci... [more]
PROA_BRAHW4.878e-4138.03Gamma-glutamyl phosphate reductase OS=Brachyspira ... [more]
PROA_SCHPO6.370e-4138.19Probable gamma-glutamyl phosphate reductase OS=Sch... [more]
PROA_METBU8.320e-4138.02Gamma-glutamyl phosphate reductase OS=Methanococco... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32013H03EF RVDevelop1 Citrus clementina cDNA clone C32013H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920855 ID=FC920855; Name=FC920855; organism=Citrus clementina; type=EST; length=728bp
GGTCAAATTTTAAAGAGAACAGACCTTGCGGATGGACTCATCCTGGAGAA
AACATCATGTCCTTTGGGCGTCCTCTTGATAGTATTTGAATCTCGACCTG
ATGCCCTGGTCCAGATAGCTTCATTGGCCATTCGGAGTGGAAATGGTCTA
CTACTGAAAGGAGGAAAAGAAGCTATGCGGTCAAATGCAATCTTGCACAA
GGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAACTTATTGGAC
TTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTTGATGATGTG
ATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTTGTTTCTCAAATCAA
GGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAATTTGTCATG
TTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAACATTGTTATT
GATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGAAACTCTTCT
GGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTTGTTGTAG
AACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGAGCAAGTAAA
TTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTACAACTCAAT
GGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTATTGACATAT
TCATCACATGGAAGTGCCATACTGATGC
back to top