FC920855

Overview
NameFC920855
Unique NameFC920855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1194..1921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PROMA (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus GN=proA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.419e-40
Identity = 95/227 (41.85%), Postives = 141/227 (62.11%), Query Frame = 1
Query:   22 DLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASK--LLKIPETRLFHHEYNSMVCTVEIVDDVRAAI 693
            +L   L L++ + PLGV+ ++FESRPDA++QIASLAIRSGNG +LKGG EA  +N  + K +   +  + +  + I L+ +R+E               PRGSN+LV  I+++T+IPVLGHADGICH+Y+D + NL+ A +I ID+K  YPAACNA+ETLL+HKD+A +  L   +   +  GV L G   +    ++   E   +  EY  +  +V++V  V  A+
Sbjct:  110 ELNTNLYLQRVTVPLGVIGVIFESRPDAVMQIASLAIRSGNGAILKGGSEASLTNIEIVKAMKEGLSKSDIQPESICLLKTRQESLGLLGLDGIVDLIIPRGSNELVRFIQDNTRIPVLGHADGICHLYIDSAVNLNQALDIAIDSKCQYPAACNAIETLLLHKDIAAS-FLKLAIPAFEKLGVTLLGDELSQSFGIITKAEESDWSTEYLDLKLSVKVVSSVDEAM 335          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_METBF (Gamma-glutamyl phosphate reductase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=proA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.199e-40
Identity = 95/250 (38.00%), Postives = 141/250 (56.40%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKL--IGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK----IPETRLFHH----EYNSMVCTVEIVDDVRAAIDIFITWKCH 720
            G  L   +L   LIL + SCP+G++ ++FESRPD + Q+ SL ++SGN  + KGG EA  SN  + +++  AI  T G       L+ +REEI              PRGSN+ V  I+E+TKI VLGH  GICH+YVD+  +LD A  +  DAK+ YPA CNA+ETLL+++ +A +  L ++       GV L     +  LL+     P +R        EYN ++ ++++VD ++ AID   T+  H
Sbjct:   98 GDTLSTLELDKDLILYQVSCPIGLIGVIFESRPDVVPQVMSLCLKSGNATIFKGGSEARESNRTIFQILVKAIESTDGMPAGAFQLMETREEIMDLLSLDAYVDLLIPRGSNEFVKFIQENTKISVLGHTSGICHIYVDEYVDLDTAWKVCFDAKVQYPAVCNAIETLLINRKIA-DTFLPKMAEMYLSAGVELRCDEDSYALLEKRGLSPLSRATEEDWSLEYNDLILSIKLVDTIKEAIDHINTFGSH 346          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_METAC (Gamma-glutamyl phosphate reductase OS=Methanosarcina acetivorans GN=proA PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.201e-39
Identity = 96/251 (38.25%), Postives = 144/251 (57.37%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVG--EKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELV-------VELQ--HEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAIDIFITWKCH 720
            G+ L   +L + LIL + SCP+G++ ++FESRPD + Q+ SL ++SGN  + KGG EA  SN  + +++  AI  T G  +    L+ +REEI              PRGSN+ V  I+++TKIPVLGH  GICH+YVD+ A+ D A  +  DAK+ YPA CNA+ETLLV++ +A    L ++        VEL+   +   L      S L K  E   +  EYN ++ ++++VD ++ AI    T+  H
Sbjct:   98 GETLSTLELDNDLILYQISCPIGLIGVIFESRPDVVPQVMSLCLKSGNATIFKGGSEARESNRTIFEILVKAIESTEGMPKGAFQLMETREEIMSLLSLDAYVDLLIPRGSNEFVKFIQDNTKIPVLGHTSGICHIYVDEFADPDTAWKVCFDAKVQYPAVCNAIETLLVNRKIA-EAFLPKMAEMYIKAGVELRCDKDSYILLAEKGLSPLSKATEED-WSLEYNDLILSIKLVDTIKEAIAHINTFGSH 346          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_YEAST (Gamma-glutamyl phosphate reductase OS=Saccharomyces cerevisiae GN=PRO2 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.624e-36
Identity = 76/174 (43.68%), Postives = 113/174 (64.94%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEK-----LIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVH 507
            G++    +L DGL L + + P+GVLL++FESRP+ +  I +L+I+SGN  +LKGGKE++ +   + K++   I     E       + L+ +R+++              PRGSN LV +IK++TKIPVLGHADGIC +Y+D+ A+L  AK I +DAK +YPA CNAMETLL++
Sbjct:   94 GKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNAMETLLIN 267          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_CLOAB (Gamma-glutamyl phosphate reductase OS=Clostridium acetobutylicum GN=proA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.910e-35
Identity = 88/240 (36.67%), Postives = 139/240 (57.92%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI-----TSAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--IPET-RLFHHEYNSMVCTVEIVDDVRAAID 696
            G+++K     D L + +   PLGV+ I++E+RP+  V  A+L I+SGN ++L+GGKEA+ SN  + K+I     T+ +PD   E +   +T RE +              PRG   L+  + E++ +PV+    G CHVYVDK A+ D A+ I+I+AK+  PA CNAME+LLVHKD+A +  L  +  +L+   V + G     K++K  +P T   F  E+  ++ +V++VD +  AID
Sbjct:   96 GEVIKMWKTPDELQIGQMRVPLGVIGIIYEARPNVTVDAAALCIKSGNSVILRGGKEAINSNTAIAKIIKNAVVTAGLPDGSIEFID--ITDRETVNVMMRLNGLIDVLIPRGGAGLIKSVVENSSVPVIETGTGNCHVYVDKYADFDKAERIIINAKLQRPAVCNAMESLLVHKDVA-HEFLPRISSKLKELKVQIRGCAATQKIVKDIVPATDEDFGKEFLDLILSVKVVDSLEEAID 332          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_NAUPA (Gamma-glutamyl phosphate reductase OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=proA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.866e-33
Identity = 82/242 (33.88%), Postives = 137/242 (56.61%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP-DTVGEKLIGLVT--SREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPET--RLFHHEYNSMVCTVEIVDDVRAAIDIFITW 711
            G+++    L +GL +EK   P+GV+ I++ESRP+     A L   SGN  +LKGGKEAM SN  +  V+   +  +++ +  + L+   SRE +              PRG  KL+  + E++K+PV+ H  G+CH+Y+ K AN+D A  I ++AK+  P  CNA+ETLLV + +  N  L +L  E++ EGV L G  +  +++ I +     ++ EY   + ++++V D+  AI+   T+
Sbjct:   90 GRVIDGWMLDNGLRIEKVKIPIGVIGIIYESRPNVTSDAAGLCFMSGNACILKGGKEAMYSNIAIINVLRDVLERNSLPKDAVSLLPDYSREGVYKLIQEDKYVDLIIPRGGEKLIKFVSENSKVPVVKHDKGLCHIYIHKDANIDEAVKISVNAKVQRPGVCNAVETLLVDESVK-NEILPKLKAEMEKEGVELRGCEKTLEVIDINKATEEDWNTEYLDKILSIKVVRDLNEAIEHIQTY 330          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_GEOLS (Gamma-glutamyl phosphate reductase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=proA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.385e-33
Identity = 82/241 (34.02%), Postives = 133/241 (55.19%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLV--TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACN------GALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAID 696
            G++ +     +GL++ K   PLGV+ IV+ESRP+     A+L ++SGN ++L+GG EA+ SN  +   +   + +  + E  + L+  T RE +              PRG   L+  + E+++IPV+ H  G+CH++VD SA+ ++A  I+I+AK   P  CNA+ETLL+HKD+A         +L EL VEL+ +       P A    K+     +  EY  ++   ++VDD+ AAID
Sbjct:   96 GEVTRMWKRPNGLMVGKMRIPLGVIGIVYESRPNVTADAAALCLKSGNAVVLRGGSEAIHSNRAIAATLQGVMKELGIPEAALSLIPFTEREGVLEMLKQEELIDLIIPRGGESLIRFVVENSRIPVIKHYKGVCHLFVDASADFEMATRIIINAKTQRPGVCNALETLLIHKDVAATFIPPFAKSLGELQVELRGDEEFRKYAPAA----KVATEEDWAAEYLELILACKVVDDMDAAID 332          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_DESOH (Gamma-glutamyl phosphate reductase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=proA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.139e-32
Identity = 84/241 (34.85%), Postives = 131/241 (54.36%), Query Frame = 1
Query:   31 DGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVIT-----SAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL---KIPETRLFHHEYNSMVCTVEIVDDVRAAIDIFITW-KCHTD 726
            +GL + +   PLGV+ I++ESRP+  V  A L +++GN ++L+GG EA+ SN  L   I+     S +P+T  +  +  V  RE +              PRG   L+  + + + IPVL H  G+CHVYVD+ A++++A+ I  +AK+  P  CNAMETLLVH+D A    L ++  +    GV L G      LL   +  E   ++ EY  ++  V++VD + AAI    T+   HT+
Sbjct:  106 NGLEVARMRIPLGVIGIIYESRPNVTVDAAGLCLKAGNTVILRGGSEALHSNRALAATISASLAESGLPETAVQ--VVPVADREAVTHLLAQEEYIDLIIPRGGEGLIRFVVQHSSIPVLKHYKGVCHVYVDQDADMEMARAICFNAKVQRPGVCNAMETLLVHRD-AAQRFLPDMARQFADAGVALRGCAATRALLPGIETAEEADWYAEYLDLILAVKVVDSMDAAISHIATYGSSHTE 343          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_HELHP (Gamma-glutamyl phosphate reductase OS=Helicobacter hepaticus GN=proA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.220e-32
Identity = 81/238 (34.03%), Postives = 135/238 (56.72%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPD-TVGEKLIGLV--TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVG-LFGGPRASKLLKIPETRL--FHHEYNSMVCTVEIVDDVRAAID 696
            GQ++K      GL + + S PLGV+ +++ESRP+    +++L  +SGN  +LKGGKEA  SN  + K + SA+   ++ ++ + ++  TSRE I              PRG   L+  +K +  IP++ H  G+CH Y+ KSANLD+A N+V++AK+ YPAACNA E +L+ + L   G L +L+ +L+   V  +F      K   I +  L  F  E+   +  +++V+ +  A++
Sbjct:   91 GQVIKSWKNKAGLEITQVSVPLGVIGVIYESRPNVTSDVSALCFKSGNVCVLKGGKEAFHSNVAILKALHSALEQHSLPKECVSMIEDTSREGILEFVKMDKYVDLLIPRGGEGLIEFVKHNATIPIIKHDKGVCHTYIHKSANLDMALNVVLNAKLSYPAACNACECILLDEVLV-EGFLPKLLTKLREADVRVMFENEVWLKNWGIADDGLADFSKEWGDKILNLKVVNGIDEALE 327          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_THEYD (Gamma-glutamyl phosphate reductase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=proA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31
Identity = 79/240 (32.92%), Postives = 136/240 (56.67%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVT-----SREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAID 696
            G+I K     +G+ + K   P+GV+ +++E+RP+  V +  L +++GN ++L+GG EA+ SN  L K++  A+ D    +  G+VT      RE +              PRG   L+  + E+++IPVL H  G+CHV+VD+ A+L +A+ I  +AK+  PA CNAMET+LV +++A    L  ++ + +  GV L G  +  K+   +K  +   F+ EY  +V  V++V ++  AI+
Sbjct:   96 GEITKMWLRPNGMQVGKMRVPIGVIGVIYEARPNVTVDVTGLCLKAGNSVVLRGGSEAINSNIALVKILKEALKDEGMHE--GVVTYIDISQREAVLEMIKLEGIIDLIIPRGGEGLIRTVTENSRIPVLKHYKGVCHVFVDRDADLAMAEEICFNAKVQRPATCNAMETMLVDENIA-KKFLPNMLKKFEDAGVELKGCLKTKKIYPKVKDVKEEDFYQEYLDLVLNVKVVKNIDEAIE 332          
The following BLAST results are available for this feature:
BLAST of FC920855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_PROMA1.419e-4041.85Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_METBF9.199e-4038.00Gamma-glutamyl phosphate reductase OS=Methanosarci... [more]
PROA_METAC1.201e-3938.25Gamma-glutamyl phosphate reductase OS=Methanosarci... [more]
PROA_YEAST1.624e-3643.68Gamma-glutamyl phosphate reductase OS=Saccharomyce... [more]
PROA_CLOAB8.910e-3536.67Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_NAUPA2.866e-3333.88Gamma-glutamyl phosphate reductase OS=Nautilia pro... [more]
PROA_GEOLS6.385e-3334.02Gamma-glutamyl phosphate reductase OS=Geobacter lo... [more]
PROA_DESOH4.139e-3234.85Gamma-glutamyl phosphate reductase OS=Desulfococcu... [more]
PROA_HELHP9.220e-3234.03Gamma-glutamyl phosphate reductase OS=Helicobacter... [more]
PROA_THEYD1.573e-3132.92Gamma-glutamyl phosphate reductase OS=Thermodesulf... [more]

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Properties
Property NameValue
Genbank descriptionC32013H03EF RVDevelop1 Citrus clementina cDNA clone C32013H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920855 ID=FC920855; Name=FC920855; organism=Citrus clementina; type=EST; length=728bp
GGTCAAATTTTAAAGAGAACAGACCTTGCGGATGGACTCATCCTGGAGAA
AACATCATGTCCTTTGGGCGTCCTCTTGATAGTATTTGAATCTCGACCTG
ATGCCCTGGTCCAGATAGCTTCATTGGCCATTCGGAGTGGAAATGGTCTA
CTACTGAAAGGAGGAAAAGAAGCTATGCGGTCAAATGCAATCTTGCACAA
GGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAACTTATTGGAC
TTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTTGATGATGTG
ATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTTGTTTCTCAAATCAA
GGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAATTTGTCATG
TTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAACATTGTTATT
GATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGAAACTCTTCT
GGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTTGTTGTAG
AACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGAGCAAGTAAA
TTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTACAACTCAAT
GGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTATTGACATAT
TCATCACATGGAAGTGCCATACTGATGC
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