FC920855

Overview
NameFC920855
Unique NameFC920855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1194..1921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_THEPX (Gamma-glutamyl phosphate reductase OS=Thermoanaerobacter sp. (strain X514) GN=proA PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.054e-31
Identity = 78/238 (32.77%), Postives = 132/238 (55.46%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLV--TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAID 696
            G I K     +GL + K   P+GV+ I++ESRP+     A L ++SGN ++L+GG +A+ SN  +  ++  A  +T + E  I L+  T REE+              PRG   L+  + E++ +PV+    G CH++VD++A  ++AK+I+++AK+  P  CNA+ET+LVHK +A    L  +V EL   GV + G     ++   +K    + +  EY  ++  V++VD +  A+D
Sbjct:   92 GSIEKMWKRPNGLQIGKMRVPIGVIGIIYESRPNVTADAAGLCLKSGNAVILRGGSDAINSNIAISSILAKAAYETGIPEGAIQLIENTDREEVNRMMKLNGLIDLIIPRGGASLIKNVIENSTVPVIETGVGNCHIFVDETAKFNIAKDIIVNAKVQRPGVCNAVETVLVHKSIA-KEFLPLMVEELTSLGVEIRGCQITKEICPQVKEATDKDWETEYLDLILAVKVVDGIEEALD 328          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SULSY (Gamma-glutamyl phosphate reductase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=proA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31
Identity = 82/254 (32.28%), Postives = 135/254 (53.15%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTV-GEKLIGLV--TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVG----------LFGGPRASKLLKIP-ETRLFHHEYNSMVCTVEIVDDVRAAIDIFITWKCH 720
            G+I+      +GL + +   PLGV+LI++E+RP+  ++ ASL ++S N ++LKGG E + SN IL  +I  A  +T   E+ +  V  T RE +              PRG   L+  + E++KIPV+ H  G+C++YVD  A+++ A NI  +AK+  P+ CNA+E L+VHK +A +  L E+       GV           L   P+A     +P +   ++ E+  ++  V++VD +  AID    +  H
Sbjct:   96 GEIINMWTRPNGLKVGQMRVPLGVILIIYEARPNVTIEAASLCMKSSNAVILKGGSETINSNRILVDIIKQACRETCFPEEAVQFVDTTDREVVNHLLKLEGLIDVAIPRGGESLIRAVAENSKIPVIKHYKGVCNLYVDDEADMEKALNIAYNAKVQRPSVCNAIENLVVHKKIA-DKFLPEIAYYFGKAGVEMRCDEYSYNLLINHPKAKDTEIVPAKEEDYYEEFLDLIIAVKVVDSLDEAIDFIEKYGSH 348          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_LACPL (Gamma-glutamyl phosphate reductase OS=Lactobacillus plantarum GN=proA PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31
Identity = 79/226 (34.96%), Postives = 127/226 (56.19%), Query Frame = 1
Query:   34 GLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI-PDTVGEKLIGLVT--SREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK--IPETRL-FHHEYNSMVCTVEIVDDVRAAI 693
            GL++ K   PLGV+ ++FE+RP+  V  ++L  ++GN ++L+GGKEA+ SN  L +V+  A+  + V E  I L+T  S                  PRGS +L+  +     +PV+    G CHVYVDK A L +A +IVI+ K+  P+ CNA E LL+H+++A +  L  ++  L+ +GV + G      ++   +P T   +  EYN ++  V++VD   AAI
Sbjct:  101 GLMIAKERVPLGVIGMIFEARPNVTVDASALCFKTGNAVILRGGKEALHSNQALVQVLRGALRAEAVDENAIQLITDTSHATAAKFMQLTDYVDVLIPRGSARLIQTVLAKATVPVIETGAGNCHVYVDKDAQLQMATDIVINGKVQRPSVCNATEKLLIHREVAAD-YLPSMIQALREQGVEVRGDAATQAIVPDVVPATDADWGTEYNDLIIAVKVVDSEAAAI 325          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_THEP3 (Gamma-glutamyl phosphate reductase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=proA PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.504e-31
Identity = 78/238 (32.77%), Postives = 132/238 (55.46%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLV--TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKL---LKIPETRLFHHEYNSMVCTVEIVDDVRAAID 696
            G I K     +GL + K   P+GV+ I++ESRP+     A L ++SGN ++L+GG +A+ SN  +  ++  A  +T + E  I L+  T REE+              PRG   L+  + E++ +PV+    G CH++VD++A  ++AK+I+++AK+  P  CNA+ET+LVHK +A    L  +V EL   GV + G     ++   +K    + +  EY  ++  V++VD +  A+D
Sbjct:   92 GSIEKMWKRPNGLQIGKMRVPIGVIGIIYESRPNVTADAAGLCLKSGNAVILRGGSDAINSNIAISSILAKAAYETGIPEGAIQLIENTDREEVNRMMKLNGLIDLIIPRGGASLIKNVIENSTVPVIETGVGNCHIFVDETAKFNMAKDIIVNAKVQRPGVCNAVETVLVHKSIA-KEFLPLMVEELTSLGVEIRGCQITKEICPQVKEATDKDWETEYLDLILAVKVVDGIEEALD 328          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_ARCB4 (Gamma-glutamyl phosphate reductase OS=Arcobacter butzleri (strain RM4018) GN=proA PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.504e-31
Identity = 86/236 (36.44%), Postives = 132/236 (55.93%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI-PDTVGEKLIGLV--TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK-IPET-RLFHHEYNSMVCTVEIVDDVRAAI 693
            G+IL      DGL ++K S P+GV+ I++ESRP+     A+L  +SGN  +LKGGKEA  SN  +  ++   +  + + E  I L+  +SRE +              PRG   L+  + E++ IPV+ H  GICH+++D+ AN+    +IV++AK   P+ACN++ETLL+H ++A    L+ LV  L   G  L G P   + +  IP T   F  EY + V  ++IV +V  AI
Sbjct:   90 GKILNGWVTKDGLNIQKVSIPIGVIGIIYESRPNVTSDTAALCFKSGNVCVLKGGKEAENSNKAIATILREVLRKNNLPEYAISLLPDSSREGVAKLIKQDKYVDLIVPRGGEALIRFVSENSSIPVIKHDKGICHIFIDQDANITKIFDIVVNAKCQKPSACNSIETLLIHTNIAAL-ILSGLVETLSLHGTILKGCPETLQHINAIPATLEDFDTEYLANVLNIKIVANVDEAI 324          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SYNAS (Gamma-glutamyl phosphate reductase OS=Syntrophus aciditrophicus (strain SB) GN=proA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.576e-31
Identity = 78/238 (32.77%), Postives = 130/238 (54.62%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLV--TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAID 696
            G++       +GL++ +   PLGV+ I++ESRP+     A+L ++SGN ++L+GG EA+ SN  + +++   + +T + E  I +V  T RE +              PRG   L+  +   ++IPV+ H  G+CHV+VD  A+L++A  I ++AKI  P  CNAMETLLVH++ A    L EL  +L+   V + G      L+   E      ++ EY  +V ++ +V  +  A+D
Sbjct:   96 GKVTSMWRRPNGLLVGRMRIPLGVIGIIYESRPNVTADAAALCLKSGNAVILRGGSEAIHSNIAIGRLLKDVLKETSLPEAAIQVVETTDREAVYELLQLEEYIDLIIPRGGEDLIRAVVRQSRIPVIKHYKGVCHVFVDADADLEMAAKICLNAKIQRPGVCNAMETLLVHRE-AAPRFLPELARKLRESHVVIRGCEETCALISDAEQATEADWYREYLDLVLSIRVVGGIEEAMD 332          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_GEOMG (Gamma-glutamyl phosphate reductase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=proA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.576e-31
Identity = 76/241 (31.54%), Postives = 131/241 (54.36%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVT--SREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLA------CNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAID 696
            G++ +     + L++ K   PLGV+ I++E+RP+     A+L +++GN ++L+GG EA+ SN  + +++   +    + +  + ++    RE +              PRG   L+  + E +KIPV+ H  G+CHV+VD SA+ D+A+ IV++AK+  P  CNA+ETLL+HKD+A          L +L VEL+ +       P+A K  +      +  EY  ++  V +VD +  AID
Sbjct:   96 GEVTRMWKRPNNLMVGKMRIPLGVIGIIYEARPNVTADAAALCLKAGNSVILRGGSEAIHSNLAIARILGEEMERAGIPKAALSVIPFPEREGVLEMLKQEEFIDLIIPRGGESLIRFVVEHSKIPVIKHYKGVCHVFVDASADFDMAERIVVNAKVQRPGVCNALETLLIHKDVAEAFIPRIAATLTDLKVELRGDDCVRQFAPQAKKATE----EDWQAEYLELILAVRVVDGLNEAID 332          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_SULNB (Gamma-glutamyl phosphate reductase OS=Sulfurovum sp. (strain NBC37-1) GN=proA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.976e-31
Identity = 84/242 (34.71%), Postives = 127/242 (52.48%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLV--TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKI-PETRL-FHHEYNSMVCTVEIVDDVRAAIDIFITW 711
            G++L      DGL +EK S P+GV+ I++ESRP+     A+L+ +S N  +LKGGKEA  SN  + KV+ + +    + E LI L+   SRE +              PRG   L+  + E+  +PV+ H  G CH Y+D+ AN++ A  I I+AK+  P  CNAMETLLV   +A    L  L          L G     +++++ P T + F  EY + +  + +VD V  AID  + +
Sbjct:   90 GRVLDGWVTEDGLKIEKVSVPIGVIGIIYESRPNVTSDTAALSFKSSNVCVLKGGKEAQHSNEAIAKVLRAVLKKNGLPEALISLIPDASREGVAKLIKMDKYVDLIVPRGGEGLIRYVSENASVPVVKHDKGQCHTYIDEDANVENAIRIAINAKVQRPGVCNAMETLLVDTAIA-KEVLPLLKEAFDAAHTELKGCGETQEIIEVAPATEVDFDTEYLANILNIRVVDGVEGAIDHIVRY 330          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_GEOSL (Gamma-glutamyl phosphate reductase OS=Geobacter sulfurreducens GN=proA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.976e-31
Identity = 77/240 (32.08%), Postives = 131/240 (54.58%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVT--SREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLA------CNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAI 693
            G++ +     +GL + K   PLGV+ I++E+RP+     A+L ++SGN ++L+GG EA+ SN  + +++   +    +    + +V    RE +              PRG   L+  + E+++IPV+ H  G+CHV+VD  A+ D+A+ I+++ K+  P  CNA+ETLLVHKD+A          L EL VEL+ +       P+A+K  +      +H EY  ++  V +VDD+  A+
Sbjct:   96 GEVTRMWTRPNGLRVGKMRIPLGVIGIIYEARPNVTADAAALCLKSGNSVILRGGSEAIHSNLAIARILGEELKRAGIPAAALSVVPFPEREGVLEMLKQEEFIDLIIPRGGESLIRFVVENSRIPVIKHYKGVCHVFVDADADFDMAEKIIVNGKVQRPGVCNALETLLVHKDIAETFIPRIAETLIELKVELRGDDCVRQFVPQATKATEDD----WHAEYLELILAVRVVDDLDEAV 331          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_DEHSB (Gamma-glutamyl phosphate reductase OS=Dehalococcoides sp. (strain BAV1) GN=proA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.976e-31
Identity = 83/242 (34.30%), Postives = 133/242 (54.96%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLV--TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK-------IPET-RLFHHEYNSMVCTVEIVDDVRAAI 693
            G+I     + +GLI+ K   PLGV+  ++ESRP+  V IASL +++GN ++L+GGKE + SN IL K+I  A+    + ++ +  +  T R  +              PRG   L+S +K+++ IPV+    G+ HVYVD +A +  A NI  ++K+  P  CNAM+TLLVHKD+A    L  +  E    GV +     A K+L+       IP T   +  E+ +++  V++VD +  A+
Sbjct:   97 GEIFDMNTMPNGLIIGKKRVPLGVIAAIYESRPNVTVDIASLCLKAGNAVILRGGKETIHSNTILAKLIRQAVEQAGLPKEAVQFIENTDRNLVNHLLKLSDQIDLVIPRGGAGLISYVKQNSFIPVVAGGIGVVHVYVDANAKVTDAVNIAYNSKVQRPTVCNAMDTLLVHKDIA-PVFLPAVAAEWSKAGVEIRADEAALKILENTFGCKLIPATPDDWGKEFLALIAAVKVVDSLDEAL 337          
The following BLAST results are available for this feature:
BLAST of FC920855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_THEPX2.054e-3132.77Gamma-glutamyl phosphate reductase OS=Thermoanaero... [more]
PROA_SULSY2.683e-3132.28Gamma-glutamyl phosphate reductase OS=Sulfurihydro... [more]
PROA_LACPL2.683e-3134.96Gamma-glutamyl phosphate reductase OS=Lactobacillu... [more]
PROA_THEP33.504e-3132.77Gamma-glutamyl phosphate reductase OS=Thermoanaero... [more]
PROA_ARCB43.504e-3136.44Gamma-glutamyl phosphate reductase OS=Arcobacter b... [more]
PROA_SYNAS4.576e-3132.77Gamma-glutamyl phosphate reductase OS=Syntrophus a... [more]
PROA_GEOMG4.576e-3131.54Gamma-glutamyl phosphate reductase OS=Geobacter me... [more]
PROA_SULNB5.976e-3134.71Gamma-glutamyl phosphate reductase OS=Sulfurovum s... [more]
PROA_GEOSL5.976e-3132.08Gamma-glutamyl phosphate reductase OS=Geobacter su... [more]
PROA_DEHSB5.976e-3134.30Gamma-glutamyl phosphate reductase OS=Dehalococcoi... [more]

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Properties
Property NameValue
Genbank descriptionC32013H03EF RVDevelop1 Citrus clementina cDNA clone C32013H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920855 ID=FC920855; Name=FC920855; organism=Citrus clementina; type=EST; length=728bp
GGTCAAATTTTAAAGAGAACAGACCTTGCGGATGGACTCATCCTGGAGAA
AACATCATGTCCTTTGGGCGTCCTCTTGATAGTATTTGAATCTCGACCTG
ATGCCCTGGTCCAGATAGCTTCATTGGCCATTCGGAGTGGAAATGGTCTA
CTACTGAAAGGAGGAAAAGAAGCTATGCGGTCAAATGCAATCTTGCACAA
GGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAACTTATTGGAC
TTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTTGATGATGTG
ATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTTGTTTCTCAAATCAA
GGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAATTTGTCATG
TTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAACATTGTTATT
GATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGAAACTCTTCT
GGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTTGTTGTAG
AACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGAGCAAGTAAA
TTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTACAACTCAAT
GGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTATTGACATAT
TCATCACATGGAAGTGCCATACTGATGC
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