FC920855

Overview
NameFC920855
Unique NameFC920855
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11037 contig Ccv1_Contig11037:1194..1921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_DEHE1 (Gamma-glutamyl phosphate reductase OS=Dehalococcoides ethenogenes (strain 195) GN=proA PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.271e-30
Identity = 78/242 (32.23%), Postives = 133/242 (54.96%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREE--IPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLK-------IPETR-LFHHEYNSMVCTVEIVDDVRAAI 693
            G+I     + +GL++ K   PLGV+  ++ESRP+  V IA+L +++GN ++L+GGKE + SN IL ++I  A+ +  + ++ +  + + E   +              PRG   L+S +K+++ IPV+    G+ H+YVD  AN+  A NI  ++K+  P  CNAM+TLLVHKD+A    L  +  E    GV +     A ++L+       IP     +  E+ ++V  V++VD +  A+
Sbjct:   97 GEIFDMNTMPNGLVIGKKRVPLGVIAAIYESRPNVTVDIAALCLKAGNAVILRGGKETIHSNTILARLIRQAVEEAGLPQEAVQFIENTEHSLVNHLLKLSDQIDLVIPRGGAGLISYVKQNSFIPVVAGGIGVVHIYVDADANIADAVNIAYNSKVQRPTVCNAMDTLLVHKDIAA-AFLPVVAAEWSKAGVEIRADKTAMEILENASSCKLIPAAADDWGKEFLALVAAVKVVDSLDEAL 337          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_AZOVD (Gamma-glutamyl phosphate reductase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=proA PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.271e-30
Identity = 85/239 (35.56%), Postives = 124/239 (51.88%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT---VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPET-----RLFHHEYNSMVCTVEIVDDVRAAI 693
            G+I     +  G+ + K   PLGV+ IV+ESRP+  +  ASL ++SGN  +L+GG EA+ SN  + + I   + +         +   T R  +              PRG   L+ +I    K+PV+ H DGICHVY+D +A+LD A  +  +AK    A CN METLLVH  +A   AL  L    + +GV L G PR+ +LL  P T       +  EYN+ + +V +VD +  AI
Sbjct:   98 GEIRDMRYMPSGIQVGKMRVPLGVIGIVYESRPNVTIDAASLCLKSGNATILRGGSEAIHSNQAIARCIRLGLAEAGLPAAAVQVVETTDRAAVGALIGMPEFVDVIVPRGGKGLIERISREAKVPVIKHLDGICHVYIDSAADLDKAIRVADNAKTQRFAPCNTMETLLVHAAIAAR-ALPPLGEIYRAKGVELRGCPRSRELLG-PGTLEASEEDWSSEYNAPILSVRVVDSLDEAI 334          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PSEFS (Gamma-glutamyl phosphate reductase OS=Pseudomonas fluorescens (strain SBW25) GN=proA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.966e-30
Identity = 87/250 (34.80%), Postives = 132/250 (52.80%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS--AIPDTVGEKL-IGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL---KIPETRL-FHHEYNSMVCTVEIVDDVRAAIDIFITW-KCHTD 726
            G+I     L  G+ + K   PLGV+ I++ESRP+  +  ASL ++SGN  +L+GG EA+ SN  +   I    A+ +   E + +   T R  +              PRG   L+ ++    K+PV+ H DG+CHV++D +A++D A  I  +AK    A CN METLLVH  +A +  L  L    + +GV L G  R   LL    I  T L ++ EY + + +++IVDD+  AI+   T+   HTD
Sbjct:   98 GEIRDMRYLPSGIQVGKMRVPLGVIGIIYESRPNVTIDAASLCLKSGNATILRGGSEAINSNRAIAACIQQGLAVAELPAEVVQVVETTDRAAVGALITMPEFVDVIVPRGGKSLIERVSRDAKVPVIKHLDGVCHVFIDIAADIDKAIRIADNAKTHRYAPCNTMETLLVHVGIA-DRVLPPLAAIYRDKGVELRGCERTRALLGADVIEATELDWYTEYTAPILSIKIVDDLDEAIEHINTYGSKHTD 346          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PELPD (Gamma-glutamyl phosphate reductase OS=Pelobacter propionicus (strain DSM 2379) GN=proA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.966e-30
Identity = 77/241 (31.95%), Postives = 131/241 (54.36%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSA-IPDTVGEKLIGLV--TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLAC------NGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAID 696
            G++ K     + L++ K   PLGV+ I+FE+RP+     A+L +++GN ++L+GGKEA+ SN  +  ++  A +   V    + L+  T R+ +              PRG   L+  + E+++IPV+ H  G+CH++VD+SA+ D+A+ I+I+AK   P  CNA+ETLL+H+ +A          L  + VEL+ +       P+A    K      ++ EY  ++    +VDD+  AID
Sbjct:   96 GEVTKMWKRPNNLMVGKMRIPLGVIGIIFEARPNVTADAAALCLKAGNAVILRGGKEAINSNRAIAAILREAMVSKGVPAGALALIPFTDRQGVLEMLKQEECIDLIIPRGGEGLIRFVTENSRIPVIKHYKGVCHIFVDESADFDMAERIIINAKTQRPGVCNALETLLIHESVAAAFIPRIASILGGMQVELRGDERFRALAPQA----KPASEEDWYAEYLELILACRVVDDLDQAID 332          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_NITSB (Gamma-glutamyl phosphate reductase OS=Nitratiruptor sp. (strain SB155-2) GN=proA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.966e-30
Identity = 82/238 (34.45%), Postives = 128/238 (53.78%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP-DTVGEKLIGLVT--SREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL---FHHEYNSMVCTVEIVDDVRAAID 696
            G++L    L +GL +EK S P+GV+ I++ESRP+     A+L  +SGN  +LKGGKEA  SN  + + I + +  + + ++L+ L+   SRE +              PRG   L+  + E+  +PV+ H  G+CH Y+DK A+ D A  I ++AK+  P  CNAMETLLV   +  +  L +L    +     L G     ++L   ET     FH EY   + ++++VD V  AI+
Sbjct:   90 GRVLDGWVLDNGLRIEKVSIPIGVIGIIYESRPNVTSDAAALCFKSGNVSILKGGKEAKNSNEAIAETIQAVLEKNDLPKELVSLLPDYSREGVEKLIKMDKYVDLIIPRGGEGLIRYVSENATVPVVKHDKGLCHTYIDKDADFDKAVAIAVNAKVQRPGVCNAMETLLVDYAIK-DEILLKLYEAFKPHMTTLKGCALTKEVLPDIETASEEDFHTEYLENILSIKVVDGVEEAIE 326          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_GEOSM (Gamma-glutamyl phosphate reductase OS=Geobacter sp. (strain M21) GN=proA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.966e-30
Identity = 76/241 (31.54%), Postives = 131/241 (54.36%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLV--TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLA------CNGALNELVVELQHEGVGLFGGPRASKLLKIPETRLFHHEYNSMVCTVEIVDDVRAAID 696
            G++       + L++ K   PLGV+ I++ESRP+     A+L ++SGN ++L+GG EA+ SN  +  ++ + +    +    + L+    RE +              PRG   L+  + E++KIPV+ H  G+CH++VD +A+ ++A+ I+++AK   P  CNA+ETLL+HKD+A         AL  L VEL+ +       P+A+K  +      ++ EY  ++    +VD + AAID
Sbjct:   96 GEVTGMWKRPNDLMVGKMRIPLGVIGIIYESRPNVTSDAAALCLKSGNAVVLRGGSEAIHSNLAIATILKAQLAKHGIPAAALSLIPFVEREGVTEMLKQEEFIDVIIPRGGESLIRFVVENSKIPVIKHYKGVCHIFVDATADFEMAREIIVNAKTQRPGVCNALETLLIHKDIAETFVPFIYEALTTLKVELRGDKTFRQFAPKAAKATE----EDWYAEYLELILAAAVVDGLDAAID 332          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PSEHT (Gamma-glutamyl phosphate reductase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=proA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.874e-30
Identity = 80/256 (31.25%), Postives = 135/256 (52.73%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSN----AILHKVIT---------SAIPDTVGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL---KIPETRLFHHEYNSMVCTVEIVDDVRAAIDIFITWKCH 720
            GQ+   T+  +G+ + K   PLGV+ +++E+RP+      +L  +SGN ++L+GGKEA++S+    +++H V+          S IPD     L+ L+  R+ I              PRG   L++ + E++ IPV+ H  G+CH+YVDK A+L+VA N++++ K      CNA+E L+VH+D+A N  LN   V L+ EGV +    +A+       +     F  EY  +   + +V    AA++    +  H
Sbjct:   93 GQLRDITERPNGIKIRKMRVPLGVVCMIYEARPNVTADAGALCFKSGNSVILRGGKEALKSSQAIASVMHSVLAKHNLPEALISVIPDPDRGLLMELMQQRDSIDLII----------PRGGEGLINFVTENSTIPVIQHFKGVCHLYVDKDADLEVAINLLLNGKTQRTGVCNALEGLVVHQDIA-NEFLNLCAVVLRQEGVKINADSQAATYFDNATVLGDDEFGEEYLDLEIAIRVVPSFAAAVEHIAQFGSH 337          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PSEAE (Gamma-glutamyl phosphate reductase OS=Pseudomonas aeruginosa GN=proA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.874e-30
Identity = 84/250 (33.60%), Postives = 124/250 (49.60%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT---VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL----FHHEYNSMVCTVEIVDDVRAAIDIFITW-KCHTD 726
            G+I     +  G+ + K   PLGV+ I++ESRP+  +  ASL ++SGN  +L+GG EA+ SN  + + I   + +         +   T R  +              PRG   L+ +I    K+PV+ H DGICHVY+D +A+LD A  +  +AK    A CN METLLVH  +A    L  L    + +GV L G      LL           +  EYN+ + ++ IVD + AAI+   T+   HTD
Sbjct:   98 GEIRDMRYVPSGIQIGKMRVPLGVVGIIYESRPNVTIDAASLCLKSGNATILRGGSEAIHSNQAIARCIQQGLAEAGLPAAAVQVVETTDRAAVGALISMPEYVDVIVPRGGKGLIERISREAKVPVIKHLDGICHVYIDVAADLDKAIRVADNAKTQRYAPCNTMETLLVHAGIA-ERVLPPLATIYREKGVELRGDAATRALLGADVLEATEEDWRTEYNAPILSIRIVDGLDAAIEHINTYGSQHTD 346          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_PSEA8 (Gamma-glutamyl phosphate reductase OS=Pseudomonas aeruginosa (strain LESB58) GN=proA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.874e-30
Identity = 84/250 (33.60%), Postives = 124/250 (49.60%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT---VGEKLIGLVTSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL----FHHEYNSMVCTVEIVDDVRAAIDIFITW-KCHTD 726
            G+I     +  G+ + K   PLGV+ I++ESRP+  +  ASL ++SGN  +L+GG EA+ SN  + + I   + +         +   T R  +              PRG   L+ +I    K+PV+ H DGICHVY+D +A+LD A  +  +AK    A CN METLLVH  +A    L  L    + +GV L G      LL           +  EYN+ + ++ IVD + AAI+   T+   HTD
Sbjct:   98 GEIRDMRYVPSGIQIGKMRVPLGVVGIIYESRPNVTIDAASLCLKSGNATILRGGSEAIHSNQAIARCIQQGLAEAGLPAAAVQVVETTDRAAVGALISMPEYVDVIVPRGGKGLIERISREAKVPVIKHLDGICHVYIDVAADLDKAIRVADNAKTQRYAPCNTMETLLVHAGIA-ERVLPPLATIYREKGVELRGDAATRALLGADVLEATEEDWRTEYNAPILSIRIVDGLDAAIEHINTYGSQHTD 346          
BLAST of FC920855 vs. ExPASy Swiss-Prot
Match: PROA_CLOK5 (Gamma-glutamyl phosphate reductase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=proA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.874e-30
Identity = 81/240 (33.75%), Postives = 131/240 (54.58%), Query Frame = 1
Query:    1 GQILKRTDLADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS-AIPDTVGEKLIGLV--TSREEIPXXXXXXXXXXXXXPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLKIPETRL-----FHHEYNSMVCTVEIVDDVRAAID 696
            G++ +    ++ L + +   PLG + I++E+RP+  V  A+L ++SGN ++LKGGKEA+ SN  ++  I   AI   +    I  +  T R+ +              PRG + L+  + E++ +PV+    G CHVYVD SA+L +A+NIVI+AK   P  CNAMETLLVH+ +A    +  L   L   GV + G  +  +L  IP+ RL     +  E+  ++  V++V  +  A+D
Sbjct:   96 GEVTRMWKKSNELNIGRVRVPLGTIGIIYEARPNVTVDAAALCVKSGNSVILKGGKEAINSNLAIYNAINKGAIEAGLPAGTIEFINMTERKAVEVLMKLNEYVDVLIPRGGSGLIKSVVENSTVPVIETGIGNCHVYVDSSADLTMAENIVINAKTQRPGVCNAMETLLVHEAVA-EKLIPHLTETLSKMGVEIRGCLKTKRL--IPDIRLATAEDYAQEFLDLILAVKVVSSLDEALD 332          
The following BLAST results are available for this feature:
BLAST of FC920855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PROA_DEHE12.271e-3032.23Gamma-glutamyl phosphate reductase OS=Dehalococcoi... [more]
PROA_AZOVD2.271e-3035.56Gamma-glutamyl phosphate reductase OS=Azotobacter ... [more]
PROA_PSEFS2.966e-3034.80Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_PELPD2.966e-3031.95Gamma-glutamyl phosphate reductase OS=Pelobacter p... [more]
PROA_NITSB2.966e-3034.45Gamma-glutamyl phosphate reductase OS=Nitratirupto... [more]
PROA_GEOSM2.966e-3031.54Gamma-glutamyl phosphate reductase OS=Geobacter sp... [more]
PROA_PSEHT3.874e-3031.25Gamma-glutamyl phosphate reductase OS=Pseudoaltero... [more]
PROA_PSEAE3.874e-3033.60Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_PSEA83.874e-3033.60Gamma-glutamyl phosphate reductase OS=Pseudomonas ... [more]
PROA_CLOK53.874e-3033.75Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]

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Properties
Property NameValue
Genbank descriptionC32013H03EF RVDevelop1 Citrus clementina cDNA clone C32013H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920855 ID=FC920855; Name=FC920855; organism=Citrus clementina; type=EST; length=728bp
GGTCAAATTTTAAAGAGAACAGACCTTGCGGATGGACTCATCCTGGAGAA
AACATCATGTCCTTTGGGCGTCCTCTTGATAGTATTTGAATCTCGACCTG
ATGCCCTGGTCCAGATAGCTTCATTGGCCATTCGGAGTGGAAATGGTCTA
CTACTGAAAGGAGGAAAAGAAGCTATGCGGTCAAATGCAATCTTGCACAA
GGTCATCACCTCAGCTATCCCAGATACTGTTGGTGAGAAACTTATTGGAC
TTGTGACTTCCAGGGAAGAGATTCCTGATTTGCTCAAGCTTGATGATGTG
ATAGATCTTGTTATCCCCAGAGGCAGCAATAAGCTTGTTTCTCAAATCAA
GGAGTCAACAAAAATTCCTGTACTTGGTCATGCTGATGGAATTTGTCATG
TTTATGTTGATAAATCGGCTAACCTTGATGTGGCAAAGAACATTGTTATT
GATGCGAAGATAGACTATCCTGCAGCCTGCAATGCTATGGAAACTCTTCT
GGTACACAAGGATTTAGCATGCAATGGTGCACTCAATGAGCTTGTTGTAG
AACTTCAACATGAAGGTGTCGGTTTATTTGGCGGACCAAGAGCAAGTAAA
TTACTAAAAATTCCTGAGACACGCTTATTCCATCATGAGTACAACTCAAT
GGTTTGTACGGTTGAAATTGTGGACGATGTGCGTGCTGCTATTGACATAT
TCATCACATGGAAGTGCCATACTGATGC
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