FC920857
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920857 vs. ExPASy Swiss-Prot
Match: ERF1_BLEAM (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma americanum GN=eRF1 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 4.590e-56 Identity = 103/168 (61.31%), Postives = 138/168 (82.14%), Query Frame = 2 Query: 170 DGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLY-NKVPPNGLVLYTGTVVTDDGK-EKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 667 +G E +NIE WKIK+LI L+ ARGNGTS+ISLI+PPR+Q+ + KM+ +E+G +SNIKSR+ RQ+V +A+TS ++RLKLY N++P NGL+LY G V+ ++G EKK TIDF+P++ IN +LY+CDNKFHT+ L +LL DDKFGFI++DGNGTLFGTL GNT+EVL Sbjct: 2 EGDELTQNIEQWKIKRLIDNLDKARGNGTSLISLIIPPREQLPIINKMITEEYGKSSNIKSRIVRQAVQSALTSTKERLKLYNNRLPANGLILYCGEVINEEGVCEKKYTIDFQPYRAINTTLYICDNKFHTQPLKDLLVMDDKFGFIIIDGNGTLFGTLQGNTKEVL 169
BLAST of FC920857 vs. ExPASy Swiss-Prot
Match: ERF1_BLEMU (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma musculus GN=eRF1 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 7.830e-56 Identity = 103/168 (61.31%), Postives = 137/168 (81.55%), Query Frame = 2 Query: 170 DGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLY-NKVPPNGLVLYTGTVVTDDGK-EKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 667 +G E +NIE WKIK+LI L+ ARGNGTS+ISLI+PPR+Q+ + KM+ +E+G +SNIKSR+ RQ+V +A+TS ++RLKLY N++P NGL+LY G V+ ++G EKK TIDF+P++ IN +LY+CDNKFHT+ L +LL DDKFGFI++DGNG LFGTL GNTREVL Sbjct: 2 EGDELTQNIEQWKIKRLIDNLDKARGNGTSLISLIIPPREQLPIINKMITEEYGKSSNIKSRIVRQAVQSALTSTKERLKLYNNRLPANGLILYCGEVINEEGVCEKKYTIDFQPYRAINTTLYICDNKFHTQPLKDLLVMDDKFGFIIIDGNGALFGTLQGNTREVL 169
BLAST of FC920857 vs. ExPASy Swiss-Prot
Match: ERF1_TRYBB (Eukaryotic peptide chain release factor subunit 1 OS=Trypanosoma brucei brucei GN=ERF1 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.633e-53 Identity = 100/163 (61.35%), Postives = 133/163 (81.60%), Query Frame = 2 Query: 179 ETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 667 E++K IE +K+KKLI+ LESARG GTS+IS+ M P++QIS + L +E+GTASNIKS N+ SV +AIT++ RLK YN++PPNGL+LY GTV+T + KEKK+T+D EPFKP++ SLYLCDNKFHTE L+ +LESD+KFGFIV+DG+GT + TL G+ +E L Sbjct: 8 ESEKAIERYKVKKLIQMLESARGMGTSVISIYMTPKEQISGMVTKLNNEYGTASNIKSHTNKLSVQSAITASLGRLKQYNRLPPNGLLLYCGTVLTAENKEKKLTLDIEPFKPVSRSLYLCDNKFHTEELHRMLESDEKFGFIVVDGSGTTYATLCGSVKEKL 170
BLAST of FC920857 vs. ExPASy Swiss-Prot
Match: ERF1_TETTH (Eukaryotic peptide chain release factor subunit 1 OS=Tetrahymena thermophila GN=ERF1 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 6.859e-52 Identity = 98/168 (58.33%), Postives = 125/168 (74.40%), Query Frame = 2 Query: 164 MSDGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 667 M + + +NIE +KIKKL+ L + RG+GTSM+SLI+PP+ QI+ TK++ DEF A+NIK RVNRQSV A+ SA QRLKLY + P NGL+LY G V+ ++GKE K+ IDFEP+KPIN SLY CD+KFH + L LLE+D FGFIVMDG G L+ L GNT+ VL Sbjct: 1 MEEKDQRQRNIEHFKIKKLMTRLRNTRGSGTSMVSLIIPPKKQINDSTKLISDEFSKATNIKDRVNRQSVQDAMVSALQRLKLYQRTPNNGLILYCGKVLNEEGKEIKLLIDFEPYKPINTSLYFCDSKFHVDELGSLLETDPPFGFIVMDGQGALYANLQGNTKTVL 168
BLAST of FC920857 vs. ExPASy Swiss-Prot
Match: ERF1_OXYTR (Eukaryotic peptide chain release factor subunit 1 OS=Oxytricha trifallax GN=ERF1 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 8.958e-52 Identity = 98/173 (56.65%), Postives = 128/173 (73.99%), Query Frame = 2 Query: 155 VPTMSDGQETD-KNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGK-EKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 667 V +++ GQ +D K+IE+WK+KKLI LE +GNGTSM+SLI+PP+D I++ K+L E A NIKSR+ +QSV+ AITS +++LKLY + P NGL LY G + +DGK EKK+ DFEPF+PIN LY C KF TE L LL DDKFGFI++DGNG L+ TL GN+RE+L Sbjct: 2 VESIAAGQVSDNKHIEMWKVKKLISKLEHCKGNGTSMVSLIIPPKDDINKYGKLLTGEMSAAQNIKSRITKQSVVTAITSTKEKLKLYKQTPTNGLCLYCGVIYMEDGKTEKKINFDFEPFRPINQFLYFCGGKFQTEPLLSLLADDDKFGFIIVDGNGALYATLQGNSREIL 174
BLAST of FC920857 vs. ExPASy Swiss-Prot
Match: ERF1_GIALA (Eukaryotic peptide chain release factor subunit 1 OS=Giardia lamblia GN=ERF1 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.528e-51 Identity = 99/176 (56.25%), Postives = 133/176 (75.57%), Query Frame = 2 Query: 140 LQFQPVPTMSDGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 667 + P S+G++ ++ I IW++K+ I+ LES G+GTS+ISL++PP +Q+S VT ML +E+GTASNIKSRVN+ +VL+AITSA RLKLYN++PPNGL +Y G + +DGK KV ID+ P+KPI+ +YLCD+KFHTE L ELL +DD FGFI+MDG TL TLSG R +L Sbjct: 1 MSINPDAPQSNGEQ-ERQIAIWQLKRTIEKLESYTGSGTSVISLLIPPGEQLSSVTGMLTNEYGTASNIKSRVNKNAVLSAITSAMSRLKLYNRLPPNGLAVYCGE-IEEDGKNTKVVIDYTPYKPISNFIYLCDSKFHTEHLRELLTNDDTFGFIIMDGKETLMATLSGTVRTIL 174
BLAST of FC920857 vs. ExPASy Swiss-Prot
Match: ERF1_DIDNA (Eukaryotic peptide chain release factor subunit 1 OS=Didinium nasutum GN=eRF1 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.528e-51 Identity = 97/163 (59.51%), Postives = 129/163 (79.14%), Query Frame = 2 Query: 179 ETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 667 E ++N+E++++K+LI LES +G+GTSMI+LI+ +DQI+ +ML +E G ASNIKSRV RQ+V A+TS ++LKLYNK PPNGLV++ G V +DG EK + ID EPFKPIN +LY CD+ FHTE + +LLE +DKFGFI+MDGNG+LFGTL G+TR VL Sbjct: 9 EYERNVEMFRLKRLIAKLESMKGSGTSMITLIINFKDQINIHARMLAEEVGKASNIKSRVTRQNVTDALTSTLEKLKLYNKTPPNGLVIFCGLVQQEDGGEKMIKIDLEPFKPINTTLYKCDSVFHTEEVRKLLEDNDKFGFIIMDGNGSLFGTLQGSTRTVL 171
BLAST of FC920857 vs. ExPASy Swiss-Prot
Match: ERF1_STYMT (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia mytilus GN=ERF1 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.404e-51 Identity = 96/173 (55.49%), Postives = 129/173 (74.57%), Query Frame = 2 Query: 155 VPTMSDGQETD-KNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGK-EKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 667 V +++ GQ D K+IE+WKIK+LI LE+ +GNGTSM+SLI+PP++ I++ K+L E A NIKSR+ RQSV+ AITS +++LKLY + P NGL +Y G ++ +DGK EKK+ DFEPF+PIN +Y C KF TE L LL DDKFGFI++DGNG L+ TL GN+RE+L Sbjct: 2 VESIAAGQVGDNKHIEMWKIKRLINKLENCKGNGTSMVSLIIPPKEDINKSGKLLVGELSAAQNIKSRITRQSVITAITSTKEKLKLYRQTPTNGLCIYCGVILMEDGKTEKKINFDFEPFRPINQFMYFCGGKFQTEPLTTLLADDDKFGFIIVDGNGALYATLQGNSREIL 174
BLAST of FC920857 vs. ExPASy Swiss-Prot
Match: ERF1_STYLE (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia lemnae GN=ERF1 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 3.404e-51 Identity = 96/173 (55.49%), Postives = 129/173 (74.57%), Query Frame = 2 Query: 155 VPTMSDGQETD-KNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGK-EKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 667 V +++ GQ D K+IE+WKIK+LI LE+ +GNGTSM+SLI+PP++ I++ K+L E A NIKSR+ RQSV+ AITS +++LKLY + P NGL +Y G ++ +DGK EKK+ DFEPF+PIN +Y C KF TE L LL DDKFGFI++DGNG L+ TL GN+RE+L Sbjct: 2 VESIAAGQVGDNKHIEMWKIKRLINKLENCKGNGTSMVSLIIPPKEDINKSGKLLVGELSAAQNIKSRITRQSVITAITSTKEKLKLYRQTPTNGLCIYCGVILMEDGKTEKKINFDFEPFRPINQFMYFCGGKFQTEPLTTLLADDDKFGFIIVDGNGALYATLQGNSREIL 174
BLAST of FC920857 vs. ExPASy Swiss-Prot
Match: ERF1_DILMA (Eukaryotic peptide chain release factor subunit 1 OS=Dileptus margaritifer GN=eRF1 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.025e-47 Identity = 91/163 (55.83%), Postives = 123/163 (75.46%), Query Frame = 2 Query: 179 ETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVL 667 E ++++E++++KKLI L++ +G+GTSMISLI+ +DQI+ KML DE G ASNIKSRV RQ+V A+TS ++LKLYNK P NGL++Y G D EK ID EPFKPIN SLY CD+ FHTE + +LLE +D+FGF++MDGNG+LFG++ G TR V+ Sbjct: 9 EYERSVEMFRLKKLIHKLDNLKGSGTSMISLIINYKDQINPFMKMLVDEVGKASNIKSRVTRQNVTDALTSTMEKLKLYNKTPNNGLIIYCGLASEGDSGEKMFKIDMEPFKPINTSLYRCDSVFHTEEVKKLLEDNDRFGFLIMDGNGSLFGSVQGATRTVI 171 The following BLAST results are available for this feature:
BLAST of FC920857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920857 ID=FC920857; Name=FC920857; organism=Citrus clementina; type=EST; length=669bpback to top |