FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPL (Chaperone protein htpG OS=Legionella pneumophila (strain Lens) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.313e-26
Identity = 80/218 (36.70%), Postives = 105/218 (48.17%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            KF+  F   LK G  ED  NK  +A+LLR+ +T SG E    SL++YV+RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +                           K IK VL                P C+V  E      M+RI++A   +         SK   EINPE+ +++ L    D
Sbjct:  373 KFWNEFGLVLKEGPIEDFANKEAIAKLLRFSTTASGSEKQEVSLEEYVSRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFTGKKLQSIS-KGKVELGDDETSEQIKEQEKTLEPLIKHIKSVLNERVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQAAGQQ------IPVSKPIFEINPEHALIKRLHDIQD 583          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_HALHL (Chaperone protein htpG OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.313e-26
Identity = 72/216 (33.33%), Postives = 106/216 (49.07%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXX--CKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYM--SSKKTMEINPENPIMEEL 634
            F+++F +  K GI ED  N+ ++A LLR+ ST    E    SL DYV RMK+GQ  IYY+T ES  A  NSP LE  ++ G EVL + D +DE+ V  L E++GK+L S                              CK + + LG               P CLV GEY +   M+R+++A        AG+   + +  +E+NP++ ++E L
Sbjct:  383 FWQAFGRVFKEGIAEDPGNRERIARLLRFSSTHEEKETPDVSLDDYVARMKDGQEKIYYVTAESFNAARNSPHLEIFRRHGIEVLLLPDPVDEWLVAHLHEYDGKQLASVAKGELDLEALGEEDDKQARQEKEQAYEDLCKRLGETLGERVSEVRVSHRLTDSPACLVVGEYDFGMGMQRLLQA--------AGHQLPAGQPALEVNPDHSVIERL 590          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_NITMU (Chaperone protein htpG OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26
Identity = 73/215 (33.95%), Postives = 109/215 (50.70%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKL--VSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 637
            F++ F + +K G+ ED  N+ ++A+LLR+ ST S  E    SL DYV RMK+GQ  IYY+T +S  A ++SP LE  +KK  EV+ + D +DE+ V  L EFEGK L  V+                             + IK+VLG               P CLVT  +  + N+ER++K+   +         +K  +EINP +P++E L+
Sbjct:  385 FWKEFGQVMKEGVAEDYANRERIAKLLRFVSTHSDSEEQDVSLSDYVGRMKDGQEKIYYVTADSLTAAKSSPHLEIFRKKDIEVILLFDRVDEWLVANLPEFEGKHLQSVAKGSLDLGKLEDEAEKKEQEKEAGEYKELTEKIKEVLGEQVKDVRITLRLTESPACLVTETHDMSGNLERLLKSAGQK------VTHTKPILEINPYHPMVERLK 593          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: ENPLL_HUMAN (Putative endoplasmin-like protein OS=Homo sapiens GN=HSP90B2P PE=5 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26
Identity = 74/233 (31.76%), Postives = 112/233 (48.07%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKD-VLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDN---SMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            F++ F  N+KLG+ ED +N+T LA+LLR+ S+    ++TSL   V RMKE Q+ I  + G                  GYEV+Y+ + + EY +  L EF+GK+  +                               +KD  +                 C LV  +YGW+ NMERIMKAQA +     S   + S KKT EINP +P++ ++ +R   D++DK+V DL ++
Sbjct:  141 FWKEFGTNIKLGVIEDHSNRTCLAKLLRFQSSHHPADITSLHQDVERMKEKQDKICLMAG------------------GYEVIYLTEPVVEYCIQALPEFDGKRFQNVAKEGVKFDDSEKTKESHEAVEKEFEPLPNWVKDKAIKDKIEKAMVSQCLTESLCALVASQYGWSGNMERIMKAQAYQTGKGISTNYHASRKKTFEINPRHPLIRDMLRRIKEDEDDKTVLDLAVV 355          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_MARAV (Chaperone protein htpG OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.184e-25
Identity = 76/230 (33.04%), Postives = 117/230 (50.87%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKL--VSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDL 682
            F++ F   LK G  ED +N+ K+A LLR+ ST +G+  +  SL DY++RMKEGQN IYYITG++  A ++SP LE  +KKG EVL + D IDE+ +G L E++GK+   V+                             + IK  L                P CLV G++   A M++IM+A   +         SK   EIN ++P+++    R + ++ ++  K+L
Sbjct:  376 FWDEFGTVLKEGPAEDFSNREKIAGLLRFASTHTGEATQNVSLDDYISRMKEGQNKIYYITGDNFAAAKSSPHLEVFRKKGIEVLILSDRIDEWMMGYLSEYDGKQFQDVARGDLDLGEVETEEDKKHQEEAAKEHKDLLERIKTALEDQVQEVRVTNRLTDSPACLVVGQFDMGAQMKKIMEAAGQK------VPESKPIFEINVDHPLVQ----RLETEQGEQRFKEL 595          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPH (Chaperone protein htpG OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.184e-25
Identity = 79/218 (36.24%), Postives = 105/218 (48.17%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            KF+  F   LK G  ED  NK  +A+LLR+ +T SG E    SL++YV+RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +                           K IK VL                P C+V  E      M+RI++A   +         SK   EINP++ +++ L    D
Sbjct:  373 KFWNEFGLVLKEGPIEDFANKEAIAKLLRFSTTASGSEKQEVSLEEYVSRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFAGKKLQSIS-KGKVELGDDETSEQIKEQEKTLEPLIKHIKSVLNERVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQAAGQQ------VPVSKPIFEINPDHALIKRLHDIQD 583          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPA (Chaperone protein htpG OS=Legionella pneumophila (strain Paris) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.184e-25
Identity = 79/218 (36.24%), Postives = 105/218 (48.17%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            KF+  F   LK G  ED  NK  +A+LLR+ +T SG E    SL++YV+RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +                           K IK VL                P C+V  E      M+RI++A   +         SK   EINP++ +++ L    D
Sbjct:  373 KFWNEFGLVLKEGPIEDFANKEAIAKLLRFSTTASGSEKQEVSLEEYVSRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFAGKKLQSIS-KGKIELGDDETSEQIKEQEKTLEPLIKHIKSVLNDRVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQAAGQQ------VPVSKPIFEINPDHALIKRLHDIQD 583          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_PSEA7 (Chaperone protein htpG OS=Pseudomonas aeruginosa (strain PA7) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25
Identity = 76/222 (34.23%), Postives = 107/222 (48.20%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            F+++F + LK G  ED  NK K+A LLR+ ST   SG++  +L DY+ RMKEGQ+ IYY+TGES   V+NSP LE  +KKG EVL + D IDE+ +  L +F+GK  V                               +  +K VL                P  L  GE      M +I++A   +         SK   EINP++P++E+L    D D+
Sbjct:  380 FWKNFGQVLKEGPAEDFGNKEKIAGLLRFASTGGDSGEQSVALADYIGRMKEGQDKIYYLTGESYSQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLPDFDGKSFVDVARGDLDLGSLDSEEDKKAQEEVAKSKEGLIERLKKVLDEQASEVRVSHRLTDSPAILAIGEQDLGLQMRQILEASGQK------VPESKPIFEINPQHPLIEKLDAEPDEDR 595          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_LEGPC (Chaperone protein htpG OS=Legionella pneumophila (strain Corby) GN=htpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25
Identity = 78/218 (35.78%), Postives = 105/218 (48.17%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            KF+  F   LK G  ED  NK  +A+LLR+ +T SG E    SL++Y++RMKEGQ+ IYYIT  S  A +NSP LE  +KKG EVL + D +DE+ VG + EF GKKL S +                           K IK VL                P C+V  E      M+RI++A   +         SK   EINP++ +++ L    D
Sbjct:  373 KFWNEFGLVLKEGPIEDFANKEAIAKLLRFSTTASGSEKQEVSLEEYISRMKEGQDKIYYITASSYNAAKNSPHLEIFRKKGIEVLLLSDKVDEWLVGYMNEFAGKKLQSIS-KGKIELGDDETSEQIKEQEKTLEPLIKHIKSVLNERVKDVLLTNRLTDSPACVVADEQDMGLEMQRILQAAGQQ------VPVSKPIFEINPDHALIKRLHDIQD 583          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_MYCLE (Chaperone protein htpG OS=Mycobacterium leprae GN=htpG PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25
Identity = 73/229 (31.88%), Postives = 107/229 (46.72%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDL 682
            F+  F K LK G+  DS N+  L  +  + ST S +E T+L  YV RMK+GQ+ I+Y TGES++ V NSP LE  K KGYEVL + D +DE  VG   EF+GK L S                              ++   K+ L                P CL+T  +G T  + RI +A      S       K+ +E+NP +P++  L++  +   +D  ++ L
Sbjct:  397 FWTQFGKVLKEGLMSDSDNRDTLLHISSFASTHSDEEPTTLAQYVERMKDGQDQIFYATGESRQQVMNSPHLEAFKAKGYEVLLLTDPVDEVWVGMAPEFDGKPLKSVARGEVDLESEEEKTAHEAERKEQEQNFAGLVNWLKETLSDHVKEVRLSTRLTESPACLITDAFGITPALARIYRA------SGQDVPFGKRILELNPNHPLITGLQQAHENGGDDTHLRQL 619          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_LEGPL5.313e-2636.70Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_HALHL5.313e-2633.33Chaperone protein htpG OS=Halorhodospira halophila... [more]
HTPG_NITMU6.939e-2633.95Chaperone protein htpG OS=Nitrosospira multiformis... [more]
ENPLL_HUMAN6.939e-2631.76Putative endoplasmin-like protein OS=Homo sapiens ... [more]
HTPG_MARAV1.184e-2533.04Chaperone protein htpG OS=Marinobacter aquaeolei (... [more]
HTPG_LEGPH1.184e-2536.24Chaperone protein htpG OS=Legionella pneumophila s... [more]
HTPG_LEGPA1.184e-2536.24Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_PSEA71.546e-2534.23Chaperone protein htpG OS=Pseudomonas aeruginosa (... [more]
HTPG_LEGPC1.546e-2535.78Chaperone protein htpG OS=Legionella pneumophila (... [more]
HTPG_MYCLE2.019e-2531.88Chaperone protein htpG OS=Mycobacterium leprae GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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