FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFT (Chaperone protein htpG OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=htpG PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.444e-25
Identity = 73/222 (32.88%), Postives = 106/222 (47.75%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            F+++F + LK G  ED +N+ K+A LLR+ ST   SGD   +L DY+ RMKEGQ+ +YY+TGES   +++SP+LE  +KKG EVL +VD IDE+ +  L EF+GK  V                                  IK  LG               P  L  GE      M ++++A   +         +K   E NP +P++E+L    D D+
Sbjct:  382 FWKNFGQVLKEGPAEDYSNREKVASLLRFASTYDTSGDPSVALTDYIARMKEGQDKLYYLTGESYAQIKDSPYLEVFRKKGIEVLLLVDRIDEWLMNYLHEFDGKSFVDIARGDLDLGNLDSEADKKAQEEIAKTKEALASRIKATLGEDVAEVRVSHRLTDSPAVLAIGEGDLGLQMRQLLEASGQK------VPETKPVFEFNPSHPLIEKLDAEQDMDR 597          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_XYLFA (Chaperone protein htpG OS=Xylella fastidiosa GN=htpG PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.444e-25
Identity = 73/222 (32.88%), Postives = 106/222 (47.75%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            F+++F + LK G  ED +N+ K+A LLR+ ST   SGD   +L DY+ RMKEGQ+ +YY+TGES   +++SP+LE  +KKG EVL +VD IDE+ +  L EF+GK  V                                  IK  LG               P  L  GE      M ++++A   +         +K   E NP +P++E+L    D D+
Sbjct:  383 FWKNFGQVLKEGPAEDYSNREKVASLLRFASTYDTSGDPSVALADYIARMKEGQDKLYYLTGESYAQIKDSPYLEVFRKKGIEVLLLVDRIDEWLMNYLHEFDGKSFVDIARGDLDLGNLDSEADKKAQEEIAKTKEALASRIKATLGEDVAEVRVSHRLTDSPAVLAIGEGDLGLQMRQLLEASGQK------VPETKPVFEFNPSHPLIEKLDAEQDMDR 598          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HSP90_PLAFP (Heat shock 90 kDa protein homolog (Fragment) OS=Plasmodium falciparum (isolate Palo Alto / Uganda) PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.444e-25
Identity = 63/132 (47.73%), Postives = 75/132 (56.82%), Query Frame = 2
Query:  296 KEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            K+F+GKKL   T                          CKVIKDVL                PC LVT E+GW+ANMERIMKAQALRDNSM  YM SKK MEIN  +PI+  L+++ADADK+DK+VK L+ L
Sbjct:    1 KDFDGKKLKCCTKEGLDIHHSEEAKKDFETLKAEYEGLCKVIKDVLHKKVEKVVVGQRITDSPCVLVTSEFGWSANMERIMKAQALRDNSMTSYMLSKKIMEINARHPIISALKQKADADKSDKTVKYLIWL 132          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_SHEAM (Chaperone protein htpG OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=htpG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 76/220 (34.55%), Postives = 104/220 (47.27%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            +F+  F   LK G  ED  N+ ++A LLR+ ST +GD     SL DY+ RMKEGQ  IYYI  +S +A  NSP LE LKKKG EVL + + IDE+ +  L +++ K L S T                            V   K  LG               P C+VTGE   ++ M ++M+A             SK T+E+NP +P++  L K  D
Sbjct:  382 QFWAEFGTVLKEGPAEDFANRERIAGLLRFASTHTGDATPSVSLDDYIGRMKEGQEKIYYIVADSHEAAANSPHLELLKKKGIEVLLLSERIDEWLINHLHDYKEKALHSVTRGDLDLGALEDEAEKAAQEKLAQESEPLVERFKSALGDKVSDVKITTRLTDTPACVVTGEGEMSSQMIKLMQAAG------QPVPESKPTLELNPTHPLVARLDKEQD 595          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_PSEMY (Chaperone protein htpG OS=Pseudomonas mendocina (strain ymp) GN=htpG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 76/222 (34.23%), Postives = 106/222 (47.75%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELT-SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            F+++F + LK G  ED  NK K+A LLR+ ST   GDE + SL DY+ R+K+GQ+ IYY+TGES   ++NSP LE  +KKG EVL + D IDE+ +  L EF+GK+ V                               +  +K  LG               P  L  GE      M +I++A   +         SK   E NP +P++E L   AD D+
Sbjct:  380 FWKAFGQVLKEGPAEDFANKEKIAGLLRFASTAGEGDEQSVSLADYLGRVKDGQDKIYYLTGESYAQIKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLTEFDGKQFVDVARGDLDLGKLDSEEDKKAQEEVAKAKEGLIERLKGALGEQVKEVRVSHRLTDSPAILAIGEQDLGLQMRQILEASGQK------VPESKPIFEFNPSHPLIERLDAEADEDR 595          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_MYCPA (Chaperone protein htpG OS=Mycobacterium paratuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 72/226 (31.86%), Postives = 106/226 (46.90%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 679
            F+  F + +K G+  D  N+  L +L  + ST S +E T+L  YV RMKEGQ  I+Y TGE+++ +  SP LE  K KGYEVL + D +DE  VG + EF+GK L S A                              +KD L                P CL+T  +G T  + R+ +A      S       K+ +E+NP++P++  LR+      +D SV +
Sbjct:  390 FWTQFGRVVKEGLLSDFDNQETLVQLCSFASTHSEEEATTLAQYVERMKEGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDEVWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAERDEQQKEFADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGITPALARLYRA------SGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAE 609          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_METCA (Chaperone protein htpG OS=Methylococcus capsulatus GN=htpG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 75/219 (34.25%), Postives = 106/219 (48.40%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKL--VSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            F++ F + LK G+ ED  NK +LA+LLR+ ST   S ++  +L +YV+RMKEGQ+ IY+++ ES  A  NSP LE  +KK  EVL + D IDE+ V  L E+EGK L  V+                             + +K  L                P CL++  YG +  MERIMK+             SK  +EINP + ++  L   AD
Sbjct:  381 FWKEFGQVLKEGLIEDFANKDRLAKLLRFSSTHTDSEEQTVTLDEYVSRMKEGQDKIYFVSAESFGAARNSPHLEIFRKKDIEVLLLSDRIDEWLVSYLTEYEGKPLQSVARGDLDLGKLEGEEEKAEAAAEKEAFAPLTERLKKALEAKVNDVRLSHRLTDSPACLISESYGMSRTMERIMKSAG------QNIPGSKPILEINPHHGLIARLNTEAD 593          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.309e-24
Identity = 74/215 (34.42%), Postives = 105/215 (48.84%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 634
            KF+  F   LK G  ED  N+ ++A+LLR+ ST    E    SL+DYV RMKEGQ  IYYIT +S  A +NSP LE  +KKG EVL M + +DE+ +  L EF+GK+LVS T                            V  +K  LG               P C+VT  +G +  M ++M+A              K  +E+NP++ ++++L
Sbjct:  388 KFWSEFGNVLKEGPAEDYANREEIAKLLRFASTAGEGEAQTVSLEDYVGRMKEGQQKIYYITADSYAAAKNSPHLEIFRKKGVEVLLMWERVDEWLMSHLTEFDGKQLVSVTRGELDLGDLEDEASKQAQEEAEKANAGLVERVKQSLGEAVKEVRVTHRLTDSPSCIVTDAHGMSTQMIKLMRAAG------QPVPEQKYILELNPDHALVKKL 596          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_SHESR (Chaperone protein htpG OS=Shewanella sp. (strain MR-7) GN=htpG PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 77/220 (35.00%), Postives = 105/220 (47.73%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            +F+  F + LK G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQN IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L E++ K+L S T                            V  IK  LG               P C+VTGE   ++ M ++M+A              K T EINP +P++  L    D
Sbjct:  382 QFWAEFGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYLSRMKEGQNKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLVERIKAALGASVADVKVTSRLTDTPACVVTGEGEMSSQMIKLMQAAG------QPVPEVKPTFEINPAHPLVSRLNDLQD 595          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPK (Chaperone protein htpG OS=Pseudomonas putida (strain KT2440) GN=htpG PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 75/222 (33.78%), Postives = 104/222 (46.85%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            F+++F + LK G  ED  NK K+A LLR+ ST+  SG++  +L DY+ R KEGQ+ IYY+TGES   V+NSP LE  +KKG EVL + D IDE+ +  L EF+GK  V                               V  +K  LG               P  L  GE      M +I++A   +         SK   E NP +P++E+L      D+
Sbjct:  380 FWKNFGQVLKEGPAEDFANKEKIAGLLRFASTQDDSGEQSVALADYLARAKEGQDKIYYLTGESYAQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLNEFDGKAFVDIARGDLDLGKLDSEEDKKAQEEVAKDKEGLVERLKGALGDSVAEVRVSHRLTDSPAILAIGEQDLGLQMRQILEASGQK------VPESKPIFEFNPSHPLIEKLDHEQSEDR 595          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_XYLFT3.444e-2532.88Chaperone protein htpG OS=Xylella fastidiosa (stra... [more]
HTPG_XYLFA3.444e-2532.88Chaperone protein htpG OS=Xylella fastidiosa GN=ht... [more]
HSP90_PLAFP3.444e-2547.73Heat shock 90 kDa protein homolog (Fragment) OS=Pl... [more]
HTPG_SHEAM1.309e-2434.55Chaperone protein htpG OS=Shewanella amazonensis (... [more]
HTPG_PSEMY1.309e-2434.23Chaperone protein htpG OS=Pseudomonas mendocina (s... [more]
HTPG_MYCPA1.309e-2431.86Chaperone protein htpG OS=Mycobacterium paratuberc... [more]
HTPG_METCA1.309e-2434.25Chaperone protein htpG OS=Methylococcus capsulatus... [more]
HTPG_AERHH1.309e-2434.42Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
HTPG_SHESR1.709e-2435.00Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_PSEPK1.709e-2433.78Chaperone protein htpG OS=Pseudomonas putida (stra... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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