FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_NITOC (Chaperone protein htpG OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=htpG PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 71/215 (33.02%), Postives = 109/215 (50.70%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 637
            F++ F + +K G+ EDS N+ ++A LLR+ ST   + ++  SL DY++RMKEGQ+ IYYIT +S  A ++SP LE  +KKG EVL + D +DE+ V  L EFEGK L S T                            V  +K+ LG               P CLV  ++  +  +ER++K    +   +      +  +E+NP +PI+  L+
Sbjct:  380 FWKEFGQVMKEGVGEDSGNREQIARLLRFASTHHDTAEQTVSLADYLSRMKEGQDKIYYITADSFPAAKSSPHLEVFRKKGIEVLLLSDRVDEWLVASLPEFEGKSLQSVTKGELDLGHLEDEQEKQQQKEVEEDFQNLVERVKNNLGDKVKEVRVTHRLTDSPVCLVVEQHDMSGYLERLLKEAGQQAPHI------QPILELNPAHPIIARLK 588          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_MYCA1 (Chaperone protein htpG OS=Mycobacterium avium (strain 104) GN=htpG PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 72/226 (31.86%), Postives = 106/226 (46.90%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 679
            F+  F + +K G+  D  N+  L +L  + ST S +E T+L  YV RMKEGQ  I+Y TGE+++ +  SP LE  K KGYEVL + D +DE  VG + EF+GK L S A                              +KD L                P CL+T  +G T  + R+ +A      S       K+ +E+NP++P++  LR+      +D SV +
Sbjct:  390 FWTQFGRVVKEGLLSDFDNQETLLQLCSFASTHSEEEATTLAQYVERMKEGQTQIFYATGETRQQILKSPHLEAFKAKGYEVLLLTDPVDEVWVGTVTEFDGKPLQSIAKGEVDLSAEGEESQAEREEQQKEFADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGITPALARLYRA------SGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAE 609          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_AERS4 (Chaperone protein htpG OS=Aeromonas salmonicida (strain A449) GN=htpG PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 74/215 (34.42%), Postives = 105/215 (48.84%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 634
            KF+  F   LK G  ED  N+ ++A+LLR+ ST    E    SL+DYV RMKEGQ  IYYIT +S  A +NSP LE  +KKG EVL M + +DE+ +  L EF+GK+LVS T                            V  +K  LG               P C+VT  +G +  M ++M+A              K  +E+NP++ ++++L
Sbjct:  384 KFWSEFGNVLKEGPAEDYANREEIAKLLRFASTAGEGEAQTVSLEDYVGRMKEGQQKIYYITADSFAAAKNSPHLEIFRKKGVEVLLMWERVDEWLMSHLTEFDGKQLVSVTRGELDLGDLEDEASKQAQEEAEKANAGLVERVKTSLGEAVKEVRVTHRLTDSPSCIVTDNHGMSTQMIKLMRAAG------QPVPEQKYILELNPDHALVKKL 592          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_THICR (Chaperone protein htpG OS=Thiomicrospira crunogena (strain XCL-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.232e-24
Identity = 71/221 (32.13%), Postives = 103/221 (46.61%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELT---SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            F++ F   +K G+ ED  NK K+A+LLR+ ST      T   SL+DY+ RM EGQ  IYYIT ++  A   SP LE  +KKG EVL + D IDE+ V  L EFEGK+L S T                           + +K  +                P C+V+ E   +A+M R+M+               K  +E+NP++ ++++L    D  K
Sbjct:  378 FWDQFGNVMKEGVIEDFANKDKIAKLLRFSSTHESSGPTQRVSLQDYIDRMGEGQEAIYYITADTYAAATGSPHLEMFRKKGIEVLLLTDRIDEWLVSHLTEFEGKQLKSVTSADLKEFDEEADKELSEEDKKAREALTEKVKKAIEDQVSDVKITHRLTDSPACVVSAEGDISAHMARMMEQMG------QAMPKQKPVLELNPDHALVKKLDSLEDEPK 592          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RHOFD (Chaperone protein htpG OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=htpG PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.232e-24
Identity = 73/215 (33.95%), Postives = 103/215 (47.91%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKL--VSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK--AQALRDNSMAGYMSSKKTMEINPENPIMEEL 634
            KFY  F   LK G+ ED  NK +LA+LLR+ S+ +     S  DY  RMKEGQ  IYYIT ++  A +NSP LE  KKKG EVL M D +DE+A+  L+EF+G  L  V+                               +K+ L                P CLV  ++G +  + R++K   QA  D         K  +E+N E+P++++L
Sbjct:  417 KFYAEFGAVLKEGLGEDYANKDRLAKLLRFASSSTDTVSVSFADYKARMKEGQEAIYYITADTPAAAKNSPQLEVFKKKGIEVLLMTDRVDEWALNYLQEFDGTPLQSVAKGAVDLGKLQDEAEKKAAEEAAETFKPLLAKLKEALKDKAEDVRVTTRLVDSPACLVVQDHGMSTQLARMLKQAGQAAPD--------VKPVLEVNAEHPLVKKL 623          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_SHESA (Chaperone protein htpG OS=Shewanella sp. (strain ANA-3) GN=htpG PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24
Identity = 75/220 (34.09%), Postives = 105/220 (47.73%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            +F+  F + LK G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQN IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L E++ K+L S T                            +  IK  LG               P C+VTGE   ++ M ++M+A              K T E+NP +P++  L    D
Sbjct:  382 QFWAEFGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYLSRMKEGQNKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLIERIKAALGASVADVKVTSRLTDTPACVVTGEGEMSSQMIKLMQAAG------QPVPEVKPTFEVNPAHPLVSRLNDLQD 595          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPF (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf0-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 72/222 (32.43%), Postives = 103/222 (46.40%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            F+++F + +K G  ED  NK K+A LLR+ ST    G+++  L +Y+ R KEGQ+ IYY+TGE+   V+NSP LE  +KKG EVL + D IDE+ +  L EF+GK  V                               V  +K  LG               P  L  GE      M +I++A   +         SK   E NP +P++E+L   A  D+
Sbjct:  380 FWKNFGQVMKEGPAEDFANKEKIAGLLRFASTNGTDGEQIVGLAEYLARAKEGQDKIYYLTGETYAQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLSEFDGKTFVDVARGDLDLGNLDSEEDKKAAEEVAKSKEGLVERLKTALGDSVAEVRVSHRLTDSPAILAIGEQDLGLQMRQILEASGQK------VPDSKPIFEFNPSHPLIEKLDNEASEDR 595          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_PSEF5 (Chaperone protein htpG OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 76/230 (33.04%), Postives = 109/230 (47.39%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDL 682
            F+++F + +K G  ED  NK K+A LLR+ ST+   G++  SL DY+ R KEGQ+ IY++TGES   V+NSP LE  +KKG EVL + D IDE+ +  L EF+GK  V                               V  IK  LG               P  L  GE      M +I++A   +         SK   E NP +P++E+L    D +++++   DL
Sbjct:  380 FWKNFGQVMKEGPAEDFANKEKIAGLLRFASTQGDDGEQNVSLADYLARAKEGQDKIYFLTGESYAQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLNEFDGKSFVDVARGDLDLGNLDSEEDKKAAEEVAKTKEGLVERIKTALGESVSEVRVSHRLTDSPAILAIGEQDLGLQMRQILEASGQK------VPDSKPIFEFNPTHPLIEKL----DGEQSEERFGDL 599          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_DESPS (Chaperone protein htpG OS=Desulfotalea psychrophila GN=htpG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 72/224 (32.14%), Postives = 115/224 (51.34%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL---TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 655
            +F+ +F   LK G+  D   + +L +LLR+ ++KS  EL    SL DY+ RM   Q  IYYI G S+ A+E  P++E  KKK  E++Y +D ID++ +  L+EFEGKKLVSA                            +++   K+ L                P  +V  +   +A+MER++ A + ++  +AG   SKK +EIN +NP++++L +   AD
Sbjct:  359 QFWSTFGIYLKEGVTTDYEYQKELGKLLRFETSKS--ELGVPVSLADYLLRMNPDQEKIYYINGASRAAIEAGPYVEMFKKKDIEIVYTLDPIDDFVLSHLQEFEGKKLVSADGADISLDKEEAEDALVDESGVDKAELAELLTWMKEELKDEVGDVLSSHRLVDAPAMIVNADGFMSASMERVL-AASRKEQGIAGVDGSKKHLEINGKNPLIKQLAELRKAD 579          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF5 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 76/219 (34.70%), Postives = 106/219 (48.40%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            F+  F + LK G  ED +N+ ++A LLR+ ST +  +    SL DY+ RM EGQ+ IYYIT +S  A +NSP LE L+KKG EVL + D +DE+    L EFEGK L S                              V  IK+ LG               P C+V GE      M++++K QA  + S     S+K  +EINP +P++  +    D
Sbjct:  375 FWNEFGRVLKEGPGEDYSNREQIARLLRFASTHTDTDTQNVSLADYLARMAEGQDKIYYITADSFLAAKNSPQLELLRKKGIEVLLLSDRVDEWLTSHLPEFEGKALTSVAKGALDLGAIETEEERKSQEETEKDAEGLVERIKNALGERVETVRVSHRLTSSPACIVLGERDMALYMQQLLK-QAGHEIS-----STKPVLEINPTHPMLARIEGEKD 587          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_NITOC1.709e-2433.02Chaperone protein htpG OS=Nitrosococcus oceani (st... [more]
HTPG_MYCA11.709e-2431.86Chaperone protein htpG OS=Mycobacterium avium (str... [more]
HTPG_AERS41.709e-2434.42Chaperone protein htpG OS=Aeromonas salmonicida (s... [more]
HTPG_THICR2.232e-2432.13Chaperone protein htpG OS=Thiomicrospira crunogena... [more]
HTPG_RHOFD2.232e-2433.95Chaperone protein htpG OS=Rhodoferax ferrireducens... [more]
HTPG_SHESA2.915e-2434.09Chaperone protein htpG OS=Shewanella sp. (strain A... [more]
HTPG_PSEPF4.973e-2432.43Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_PSEF54.973e-2433.04Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_DESPS4.973e-2432.14Chaperone protein htpG OS=Desulfotalea psychrophil... [more]
HTPG_ACIF54.973e-2434.70Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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