FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_ACIF2 (Chaperone protein htpG OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=htpG PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.973e-24
Identity = 76/219 (34.70%), Postives = 106/219 (48.40%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            F+  F + LK G  ED +N+ ++A LLR+ ST +  +    SL DY+ RM EGQ+ IYYIT +S  A +NSP LE L+KKG EVL + D +DE+    L EFEGK L S                              V  IK+ LG               P C+V GE      M++++K QA  + S     S+K  +EINP +P++  +    D
Sbjct:  375 FWNEFGRVLKEGPGEDYSNREQIARLLRFASTHTDTDTQNVSLADYLARMAEGQDKIYYITADSFLAAKNSPQLELLRKKGIEVLLLSDRVDEWLTSHLPEFEGKALTSVAKGALDLGAIETEEERKSQEETEKDAEGLVERIKNALGERVETVRVSHRLTSSPACIVLGERDMALYMQQLLK-QAGHEIS-----STKPVLEINPTHPMLARIEGEKD 587          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_COXBU (Chaperone protein htpG OS=Coxiella burnetii GN=htpG PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.495e-24
Identity = 74/221 (33.48%), Postives = 113/221 (51.13%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            F+++F + LK G  ED  N+ ++A LLR+ ST +   ++  SL+DY++RMK  QN IYYI  ++  + +NSP LE  +KK  EVL M D +DE+ V  L EFEGK L S A                            K  K+VLG               P C+V  E   + +++R++  Q  +D     +M +K  +EINP +P++  LR + ++DK
Sbjct:  382 FWKAFGQVLKEGPAEDFANRDRIANLLRFASTHNDTDEQNVSLQDYISRMKPEQNKIYYIVADTYTSAKNSPLLEVFRKKDIEVLLMSDRVDEWLVAHLNEFEGKSLQSIAKGTLDLGDLEKEEKVETEKFEKDFDELLKQFKEVLGEKIKDVRITHRLTDSPTCVVFDENEMSGHLQRLL-IQTGQD-----FMQAKPILEINPSHPLI--LRVKNESDK 594          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_COXBR (Chaperone protein htpG OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.495e-24
Identity = 74/221 (33.48%), Postives = 113/221 (51.13%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            F+++F + LK G  ED  N+ ++A LLR+ ST +   ++  SL+DY++RMK  QN IYYI  ++  + +NSP LE  +KK  EVL M D +DE+ V  L EFEGK L S A                            K  K+VLG               P C+V  E   + +++R++  Q  +D     +M +K  +EINP +P++  LR + ++DK
Sbjct:  382 FWKAFGQVLKEGPAEDFANRDRIANLLRFASTHNDTDEQNVSLQDYISRMKPEQNKIYYIVADTYTSAKNSPLLEVFRKKDIEVLLMSDRVDEWLVAHLNEFEGKSLQSIAKGTLDLGDLEKEEKVETEKFEKDFDELLKQFKEVLGEKIKDVRITHRLTDSPTCVVFDENEMSGHLQRLL-IQTGQD-----FMQAKPILEINPSHPLI--LRVKNESDK 594          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_SHESM (Chaperone protein htpG OS=Shewanella sp. (strain MR-4) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 76/220 (34.55%), Postives = 104/220 (47.27%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            +F+  F + LK G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQ  IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L E++ K+L S T                            V  IK  LG               P C+VTGE   ++ M ++M+A              K T EINP +P++  L    D
Sbjct:  382 QFWAEFGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYLSRMKEGQTKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLVERIKAALGASVADVKVTSRLTDTPACVVTGEGEMSSQMIKLMQAAG------QPVPEVKPTFEINPAHPLVSRLNDLQD 595          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_PSESM (Chaperone protein htpG OS=Pseudomonas syringae pv. tomato GN=htpG PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 76/230 (33.04%), Postives = 108/230 (46.96%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDL 682
            F+++F + LK G  ED  NK K+A LLR+ ST   SG++  SL DY+ R KEGQ+ IYY+TGES   V NSP LE  +KKG EVL + D IDE+ +  L +F+GK  V                               +  +K  LG               P  L  GE      M +I++A   +         SK   E NP +P++ +L    DA+++++   DL
Sbjct:  381 FWKNFGQVLKEGPAEDFANKEKIAGLLRFASTSDDSGEQSVSLADYLARGKEGQDKIYYLTGESYAQVRNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLSDFDGKNFVDVARGDLDLGNLDSEEDKKAQEEIAKDKEGLIERLKAALGESVSEVRVSHRLTDSPAILAIGEQDMGLQMRQILEASGQK------VPDSKPIFEFNPAHPLIGKL----DAEQSEERFGDL 600          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_PSEFS (Chaperone protein htpG OS=Pseudomonas fluorescens (strain SBW25) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 75/230 (32.61%), Postives = 110/230 (47.83%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS--GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDL 682
            F+++F + +K G  ED  NK K+A LLR+ ST+   G+++ SL +Y+ R KEGQ+ IYY+TGE+   V+NSP LE  +KKG EVL + D IDE+ +  L EF+GK  V                               V  IK  LG               P  L  GE      M +I++A   +         SK   E NP +P++E+L    D +++++   DL
Sbjct:  382 FWKNFGQVMKEGPAEDFANKEKIAGLLRFASTQGDDGEQVVSLAEYLARAKEGQDKIYYLTGETYAQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLNEFDGKSFVDVARGDLDLGNLDSEEEKKEAEEVAKSKEGLVERIKASLGDAVSEVRVSHRLTDSPAILAIGEQDLGMQMRQILEASGQK------VPDSKPIFEFNPAHPLIEKL----DGEQSEERFGDL 601          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_COXBN (Chaperone protein htpG OS=Coxiella burnetii (strain Dugway 5J108-111) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24
Identity = 74/221 (33.48%), Postives = 113/221 (51.13%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            F+++F + LK G  ED  N+ ++A LLR+ ST +   ++  SL+DY++RMK  QN IYYI  ++  + +NSP LE  +KK  EVL M D +DE+ V  L EFEGK L S A                            K  K+VLG               P C+V  E   + +++R++  Q  +D     +M +K  +EINP +P++  LR + ++DK
Sbjct:  382 FWKAFGQVLKEGPAEDFANRDRIANLLRFASTHNDTDEQNVSLQDYISRMKPEQNRIYYIVADTYTSAKNSPLLEVFRKKDIEVLLMSDRVDEWLVAHLNEFEGKSLQSIAKGTLDLGDLEKEEKVETEKFEKDFDELLKQFKEVLGEKIKDVRITHRLTDSPTCVVFDENEMSGHLQRLL-IQTGQD-----FMQAKPILEINPSHPLI--LRVKNESDK 594          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_SHEON (Chaperone protein htpG OS=Shewanella oneidensis GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23
Identity = 74/220 (33.64%), Postives = 103/220 (46.82%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            +F+  F + LK G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQ  IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L E++ K+L S T                            +  IK  LG               P C+VTGE   +  M ++M+A              K T E+NP +P++  L    D
Sbjct:  382 QFWAEFGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYISRMKEGQTKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGELELGELEDAAEKEAQEKLAEESAPLIERIKAALGASVADVKVTSRLTDTPACVVTGEGEMSTQMIKLMQAAG------QPVPEVKPTFEVNPAHPLVSRLNDLQD 595          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB9 (Chaperone protein htpG OS=Shewanella baltica (strain OS195) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23
Identity = 75/220 (34.09%), Postives = 102/220 (46.36%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            +F+  F + LK G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQ  IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L E++ K+L S T                            V  IK  LG               P C+V GE   +  M ++M+A              K T EINP +P++  L    D
Sbjct:  382 QFWAEFGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYISRMKEGQTKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGDLELGELEDASEKEAQEKLEQESVALVERIKAALGSTVADVKVTSRLTDTPACVVAGEGEMSTQMIKLMQAAG------QPVPEVKPTFEINPAHPLVSRLNDLQD 595          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB8 (Chaperone protein htpG OS=Shewanella baltica (strain OS185) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23
Identity = 75/220 (34.09%), Postives = 102/220 (46.36%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            +F+  F + LK G  ED  N+ ++A LLR+ ST +G      SL DY++RMKEGQ  IYYI  +S +A  NSP LE L+KKG EVL M + IDE+ +  L E++ K+L S T                            V  IK  LG               P C+V GE   +  M ++M+A              K T EINP +P++  L    D
Sbjct:  382 QFWAEFGQVLKEGPAEDFANRERIAGLLRFASTHTGSAAPTVSLDDYISRMKEGQTKIYYIVADSHEAAANSPHLELLRKKGIEVLLMSERIDEWLINHLTEYKEKQLHSVTRGDLELGELEDASEKEAQEKLEQESVALVERIKAALGSTVADVKVTSRLTDTPACVVAGEGEMSTQMIKLMQAAG------QPVPEVKPTFEINPAHPLVSRLNDLQD 595          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_ACIF24.973e-2434.70Chaperone protein htpG OS=Acidithiobacillus ferroo... [more]
HTPG_COXBU6.495e-2433.48Chaperone protein htpG OS=Coxiella burnetii GN=htp... [more]
HTPG_COXBR6.495e-2433.48Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_SHESM8.483e-2434.55Chaperone protein htpG OS=Shewanella sp. (strain M... [more]
HTPG_PSESM8.483e-2433.04Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_PSEFS8.483e-2432.61Chaperone protein htpG OS=Pseudomonas fluorescens ... [more]
HTPG_COXBN8.483e-2433.48Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_SHEON1.108e-2333.64Chaperone protein htpG OS=Shewanella oneidensis GN... [more]
HTPG_SHEB91.108e-2334.09Chaperone protein htpG OS=Shewanella baltica (stra... [more]
HTPG_SHEB81.108e-2334.09Chaperone protein htpG OS=Shewanella baltica (stra... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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