FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_SALTO (Chaperone protein htpG OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23
Identity = 67/228 (29.39%), Postives = 106/228 (46.49%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV---IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 679
            F+  F   +K G+ +D+ N+  L E+L   ST    E T L DYVTRMK+GQ DIYY TGE++  +ENSP +E  + KG+EVL + D +DE  V ++ E+EGK L S                              +   +   L                P C+V   +  T  +E++ +A       +      K+ +E+NP +P++  LRK  +    ++S+K+
Sbjct:  380 FWTEFGAVVKEGLIDDTENRDSLLEILSVASTHDPAEPTDLADYVTRMKDGQTDIYYATGENRSTIENSPHMEAFRAKGFEVLLLTDPVDEVWVERVGEYEGKTLRSVAKGQVDLDTEEERSAAEAERERQRTEYADLLTWLSSTLADQVREVRLSARLTTSPACVVGDAHDVTPTLEKMYRAMGHEVPQV------KRILELNPTHPLVSGLRKAREQGVTEESLKE 601          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_BORPE (Chaperone protein htpG OS=Bordetella pertussis GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23
Identity = 69/224 (30.80%), Postives = 108/224 (48.21%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 664
            F+  F + LK G  ED+ N+ ++A LLR+ ST  G++    S  DYV RMK+GQ+ IYY+T ++  A  NSP LE  +KKG EVL + D +DE+ +  L+EF+GK LVS                              V  ++  L                P C+V G+   + ++ R++KA       +      K  +EINP++ ++  +R  +DA+  D
Sbjct:  384 FWTEFGQVLKEGTGEDAANRERIARLLRFASTHDGEQAQTVSFADYVGRMKDGQDKIYYVTADTFTAAANSPHLEIFRKKGIEVLLLSDRVDEWMLSYLREFDGKSLVSVAKGGLDLAELADEEEKKRQSEVAETFKPLVERLQQALAEQVKEVRVTQRLVDSPACVVVGQNELSPHLLRMLKAAGQEAPEV------KPVLEINPDHALVARIRDASDAEFGD 601          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_BORBR (Chaperone protein htpG OS=Bordetella bronchiseptica GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23
Identity = 69/224 (30.80%), Postives = 108/224 (48.21%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL--TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 664
            F+  F + LK G  ED+ N+ ++A LLR+ ST  G++    S  DYV RMK+GQ+ IYY+T ++  A  NSP LE  +KKG EVL + D +DE+ +  L+EF+GK LVS                              V  ++  L                P C+V G+   + ++ R++KA       +      K  +EINP++ ++  +R  +DA+  D
Sbjct:  384 FWTEFGQVLKEGTGEDAANRERIARLLRFASTHDGEQAQTVSFADYVGRMKDGQDKIYYVTADTFTAAANSPHLEIFRKKGIEVLLLSDRVDEWMLSYLREFDGKSLVSVAKGGLDLAELADEEEKKRQSEVAETFKPLVERLQQALAEQVKEVRVTQRLVDSPACVVVGQNELSPHLLRMLKAAGQEAPEV------KPVLEINPDHALIARIRDASDAEFGD 601          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_ACIAD (Chaperone protein htpG OS=Acinetobacter sp. (strain ADP1) GN=htpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23
Identity = 73/221 (33.03%), Postives = 106/221 (47.96%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKL--VSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK--AQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD 655
            FY+ F   LK G+ ED TN+ ++ +LLRY ++   +  TS  DY  RMKEGQ  IYY++ +S  A +NSP LE  KKKG EVL M + +DE+A+  + EF+G  L  VS                               + D L                P CLVT +   +  + R++K   QA+ +        SK  +EINPE+P++++L   A  D
Sbjct:  394 FYQEFGSVLKEGLGEDFTNRERILKLLRYATSNQDEISTSFADYKARMKEGQKAIYYVSADSLAAAKNSPQLELFKKKGIEVLLMSERVDEWAMNFVHEFDGTPLQNVSKGAVDLGDLQDAEEKKALEQAAEQFKPVVDKLTDALKDKTKEVRVTTRLVDSPACLVTSDGELSPQLIRMLKQAGQAVPE--------SKPILEINPEHPLVQKLEGSAQFD 606          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_STRCO (Chaperone protein htpG OS=Streptomyces coelicolor GN=htpG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23
Identity = 71/224 (31.70%), Postives = 108/224 (48.21%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKS 670
            F+  F   LK G+  DS N+  +     + ST   +E T+LKDYV RMKEGQ+DIYY+TGES++A+ENSP +E  + KG EVL + DA+DE  V  + E+EGK L S                              +  + + LG               P C+V+     T  +E + +A             +K+ +E+NPE+ +++ L  RA  D+ D++
Sbjct:  383 FWREFGAVLKEGLVTDSDNRDAILAACSFASTHDAEEPTALKDYVERMKEGQDDIYYMTGESRQAIENSPHMEAFRAKGVEVLLLTDAVDEVWVDAVGEYEGKTLRSVAKGEIDLSGTEADKSDAEKEKQGEEYAGLLGWMTEHLGEEVKEVRLSSRLTVSPACVVSDAGELTPALENMYRAMGQE------VPGAKRILELNPEHQLVKSL-NRAWTDRQDRA 599          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_NITEU (Chaperone protein htpG OS=Nitrosomonas europaea GN=htpG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23
Identity = 69/215 (32.09%), Postives = 105/215 (48.84%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKL--VSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELR 637
            F+  F + LK GI ED +N+ ++A+LLR+ ST  +  ++  SL DY+ RMK  Q  IYYIT +  KA ++SP LE  +KKG EVL + D IDE+ V  L E+ GK L  ++                               +K+VLG               P CLV   +  + N+ R++K+   +         SK  +EINP +P+++ L+
Sbjct:  385 FWREFGQVLKEGIAEDYSNRERIAKLLRFTSTHDEREEQTVSLDDYIARMKPEQEKIYYITADGLKAAQSSPHLEIFRKKGIEVLLLCDRIDEWLVANLNEYTGKSLQSIAKGNLDLGKLEDEEEKKEHEKEAGDFQELTNKMKEVLGEQVKDVRITYRLTESPACLVADTHDVSGNLGRLLKSAGQK------VPDSKPFLEINPHHPMIQRLK 593          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_MAGSM (Chaperone protein htpG OS=Magnetococcus sp. (strain MC-1) GN=htpG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23
Identity = 72/226 (31.86%), Postives = 108/226 (47.79%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELT--SLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT------XXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            F++ F   LK G+ ED  NK ++A+L R+ +T  G+ +   +L DYV RMKEGQ  IYY+TGES +A  +SP LE  +KKG EVL + D +DE+ V  L EF+GK L + T                                 + +  VL                P CLV   +  +A +ER++K             ++K+ +EINP + +++ L   AD +K
Sbjct:  387 FWKEFGMVLKEGMIEDFANKERIAKLCRFSTTHDGERVPKIALADYVERMKEGQEAIYYVTGESFEACSSSPHLEIFRKKGIEVLLLSDRVDEWTVTHLTEFDGKPLQAITKGELDLSKFAGGEEEAKDEEAEKAQEEALKPITERMAKVLEGQVKEVRLSHRLTESPACLVGDAHDMSATLERLLKEAGQE------VPTAKRILEINPSHALLKRLADEADEEK 606          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_ACISJ (Chaperone protein htpG OS=Acidovorax sp. (strain JS42) GN=htpG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23
Identity = 71/215 (33.02%), Postives = 103/215 (47.91%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMK--AQALRDNSMAGYMSSKKTMEINPENPIMEEL 634
            +FY  F   LK G+ ED  N+ +LA+LLR+ ST S     S  DY  RMKEGQ  IYYIT ++  A +NSP LE  KKKG EVL M D +DE+A+  L++F+G  L S                              +  +K+ L                P CLV  + G +  + R++K   Q+  D        +K  +E+NPE+ ++++L
Sbjct:  404 QFYAEFGAVLKEGLGEDFANRERLAKLLRFASTTSDTPSVSFADYKARMKEGQEAIYYITADTLAAAKNSPQLEVFKKKGIEVLLMTDRVDEWALNYLQDFDGTPLQSVAKGAVDLGKLQDEAEKKAAEEAAEAFKPMLAKLKEALKDKAEDVRVTTRLVDSPACLVVQDGGMSTQLARLLKQAGQSAPD--------AKPVLEVNPEHALVKKL 610          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_PSE14 (Chaperone protein htpG OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=htpG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.890e-23
Identity = 75/230 (32.61%), Postives = 109/230 (47.39%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV--IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDL 682
            F+++F + LK G  ED  NK K+A LLR+ ST   SG++  SL +Y+ R KEGQ+ IYY+TGES   V+NSP LE  +KKG EVL + D IDE+ +  L +F+GK  V                               +  +K  LG               P  L  GE      M +I++A   +         SK   E NP +P++ +L    DA+++++   DL
Sbjct:  381 FWKNFGQVLKEGPAEDFANKEKIAGLLRFASTSDDSGEQSVSLAEYLARAKEGQDKIYYLTGESYAQVKNSPHLEVFRKKGIEVLLLTDRIDEWLMSYLSDFDGKGFVDVARGDLDLGNLDSEEDKKAQEEIAKDKEGLIERLKAALGESVSEVRVSHRLTDSPAILAIGEQDMGLQMRQILEASGQK------VPDSKPIFEFNPAHPLIGKL----DAEQSEERFGDL 600          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_MYCGI (Chaperone protein htpG OS=Mycobacterium gilvum (strain PYR-GCK) GN=htpG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.890e-23
Identity = 70/215 (32.56%), Postives = 101/215 (46.98%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI---KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRK 640
            F+  F + LK G+  D+ N+  L  +  + ST+S DE T+L +YV RM EGQ  I+Y  GES++ + NSP LE  K KGYEVL + D +DE  V  + EF+GK L S                              VI    +VLG               P CL+T  +G T  + R+ +A      S       K+ +E+NP +P++  LR+
Sbjct:  391 FWTQFGRVLKEGLLSDTDNQETLLRVSSFASTRSDDEPTTLAEYVERMPEGQTQIFYAAGESRQQLLNSPHLEAFKAKGYEVLLLTDPVDEVWVESIHEFDGKPLQSVAKGEVDLDSEADKEAQETERQQREKEFADVIAWLTEVLGDHVKEVRLSTRLTDSPACLITDTFGITPALARMYRA------SGQPVPVEKRILELNPTHPLVVGLRE 599          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_SALTO1.108e-2329.39Chaperone protein htpG OS=Salinispora tropica (str... [more]
HTPG_BORPE1.108e-2330.80Chaperone protein htpG OS=Bordetella pertussis GN=... [more]
HTPG_BORBR1.108e-2330.80Chaperone protein htpG OS=Bordetella bronchiseptic... [more]
HTPG_ACIAD1.108e-2333.03Chaperone protein htpG OS=Acinetobacter sp. (strai... [more]
HTPG_STRCO1.447e-2331.70Chaperone protein htpG OS=Streptomyces coelicolor ... [more]
HTPG_NITEU1.447e-2332.09Chaperone protein htpG OS=Nitrosomonas europaea GN... [more]
HTPG_MAGSM1.447e-2331.86Chaperone protein htpG OS=Magnetococcus sp. (strai... [more]
HTPG_ACISJ1.447e-2333.02Chaperone protein htpG OS=Acidovorax sp. (strain J... [more]
HTPG_PSE141.890e-2332.61Chaperone protein htpG OS=Pseudomonas syringae pv.... [more]
HTPG_MYCGI1.890e-2332.56Chaperone protein htpG OS=Mycobacterium gilvum (st... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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