FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_CHLPD (Chaperone protein htpG OS=Chlorobium phaeobacteroides (strain DSM 266) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20
Identity = 59/229 (25.76%), Postives = 112/229 (48.91%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD-ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLV 685
            KFY++F   LK+G++ D T++ ++  L+R+ STK+ + E  + K+YV RM+ GQN+IYY +G ++  +   P LE  + KG EVL + D +D + +  + E++ K L S                              + +  +G               P  LV+G+    ++ME++MK         A   ++KK +E+N  +PI++ L     A++++  ++ ++
Sbjct:  369 KFYKAFGPFLKIGLNTDFTHRDRIIGLMRFESTKTAEGEYVTFKEYVERMEAGQNEIYYHSGSNRIQLLAHPNLEYFQHKGIEVLLLSDPVDVFVIPSIHEYDKKPLKSIEKADIDFTRTGDDKTEPPLPETLSQPLLGLFRQTIGDVIEDVVESHRLVSSPVTLVSGKDSLDSSMEKMMKMM------HAEMPAAKKILEVNTSHPIIKNLSGMIMANEHNPLIRTVI 591          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_BACA2 (Chaperone protein htpG OS=Bacillus amyloliquefaciens (strain FZB42) GN=htpG PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20
Identity = 66/220 (30.00%), Postives = 106/220 (48.18%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVT-GEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            FYESF + LK G++ D   NK  L +LL ++S+K   +L +L +YV+RM E Q  IYY +G+S + +E  P  E +  KGYE+LY  + IDE+A+  L  +E K+  S +                           + +K++L                P C  T GE   T  ME+++   A+ D+     + ++K +EINP + + E L+     D+
Sbjct:  379 FYESFGRQLKFGVYNDFGANKDVLKDLLLFYSSKE-KKLVTLDEYVSRMPEDQKYIYYASGDSYERIEKLPQTEMVADKGYEILYFTEDIDEFAIKMLTSYEEKEFKSVSSADLGIDSDEDEKQTEAEENEYKDLF-ESMKEILADKVKNVRASKRLKSHPVCFATDGEV--TIEMEKVL--NAMPDSQQ---VKAEKVLEINPNHEVFETLKNAHGQDR 589          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HS904_HUMAN (Putative heat shock protein HSP 90-alpha A4 OS=Homo sapiens GN=HSP90AA4P PE=5 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20
Identity = 44/62 (70.97%), Postives = 55/62 (88.71%), Query Frame = 2
Query:  506 YGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            YGWTANMERIMKAQALRDNS  GYM++KK +EINP++  ++ LR++A+ DKNDKSVKDLV+L
Sbjct:  292 YGWTANMERIMKAQALRDNSTTGYMAAKKHLEINPDHSFIDTLRQKAETDKNDKSVKDLVIL 353          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_CLOPE (Chaperone protein htpG OS=Clostridium perfringens GN=htpG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.268e-19
Identity = 65/223 (29.15%), Postives = 106/223 (47.53%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 667
            KFY+SF + LK G+++D   NK +L +LL ++S+K   ++ SL +YV RM E Q  IYY  GES + +E  P  E +  KGYE+LY  + +DE+A+  L  ++ K+  S +                           + +K+ LG               P CL + E   +  ME+I+ A           + ++K +E+N  + +   L+   DA +NDK
Sbjct:  378 KFYKSFGRQLKYGVYDDFGMNKDELKDLLMFYSSKE-KKMVSLAEYVERMAEDQKYIYYAVGESNERIEKMPQTEMVLDKGYEILYFTEDVDEFAIKMLMNYKEKEFKSVSSGDLGIESEEENKKENEENKGIF----EAMKEALGEKISAVKASSRLKNYPVCL-SSEGEVSIEMEKILSAMPNNQG-----VKAQKVLEVNTNHEVFNSLK---DALENDK 586          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_CLOP1 (Chaperone protein htpG OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.268e-19
Identity = 65/223 (29.15%), Postives = 106/223 (47.53%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 667
            KFY+SF + LK G+++D   NK +L +LL ++S+K   ++ SL +YV RM E Q  IYY  GES + +E  P  E +  KGYE+LY  + +DE+A+  L  ++ K+  S +                           + +K+ LG               P CL + E   +  ME+I+ A           + ++K +E+N  + +   L+   DA +NDK
Sbjct:  378 KFYKSFGRQLKYGVYDDFGMNKDELKDLLMFYSSKE-KKMVSLAEYVERMAEDQKYIYYAVGESNERIEKMPQTEMVLDKGYEILYFTEDVDEFAIKMLMNYKEKEFKSVSSGDLGIESEEENKKENEENKGIF----EAMKEALGEKISAVKASSRLKNYPVCL-SSEGEVSIEMEKILSAMPNNQG-----VKAQKVLEVNTNHEVFNSLK---DALENDK 586          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_POLSJ (Chaperone protein htpG OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.162e-19
Identity = 49/107 (45.79%), Postives = 67/107 (62.62%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 325
            FY  F   LK G+ ED  N+ +LA+LLR+ S+ +        DY  RMKEGQ+ IYY+T ++  A ++SP LE  +KKG EVL M D +DE+A+  L EF+G  L S
Sbjct:  381 FYAEFGAVLKEGLGEDFANRERLAKLLRFASSTTDTVSVGFADYKARMKEGQDAIYYVTADTLAAAKSSPQLEIFRKKGIEVLLMADRVDEWALNYLHEFDGTPLQS 487          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_KLEP7 (Chaperone protein htpG OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.162e-19
Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 325
            F++ F   LK G  ED +N+  +A+LLR+ +T   S  +  SL++YV+RMKEGQ  IYYIT +S  A ++SP LE L+KKG EVL + D IDE+ +  L EF+GK   S
Sbjct:  374 FWKQFGLVLKEGPAEDPSNQEAIAKLLRFATTHTDSSAQTVSLEEYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMSYLTEFDGKAFQS 482          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_CLOPS (Chaperone protein htpG OS=Clostridium perfringens (strain SM101 / Type A) GN=htpG PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19
Identity = 64/223 (28.70%), Postives = 106/223 (47.53%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 667
            KFY+SF + LK G+++D   NK +L +LL ++S+K   ++ SL +YV RM E Q  IYY  GES + +E  P  E +  KGYE+LY  + +DE+A+  L  ++ K+  S +                           + +K+ LG               P CL + E   +  ME+I+ A           + ++K +E+N  + +   L+   DA +ND+
Sbjct:  378 KFYKSFGRQLKYGVYDDFGMNKDELKDLLMFYSSKE-KKMVSLAEYVERMAEDQKYIYYAVGESNERIEKMPQTEMVLDKGYEILYFTEDVDEFAIKMLMNYKEKEFKSVSSGDLGIESEEENKKENEENKGIF----EAMKEALGEKISAVKASSRLKNYPVCL-SSEGEVSIEMEKILSAMPNNQG-----VKAQKVLEVNTNHEVFNSLK---DALENDR 586          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_ERWCT (Chaperone protein htpG OS=Erwinia carotovora subsp. atroseptica GN=htpG PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.688e-19
Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGD--ELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 331
            F++ F   LK G  ED +N+  +A+LLR+ +T+S    +  SL+DYV+RM EGQ+ IYYIT +S  A ++SP LE  +KKG EVL + + IDE+ +  L EF+GK   S +
Sbjct:  377 FWQQFGLVLKEGPAEDGSNREAIAKLLRFATTQSDSSAQTVSLEDYVSRMVEGQDKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSERIDEWMMSYLTEFDGKSFQSVS 487          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_CLOAB (Chaperone protein htpG OS=Clostridium acetobutylicum GN=htpG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19
Identity = 68/231 (29.44%), Postives = 109/231 (47.19%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KF+ SF + LK G++ D  +NK  L +LL ++S+    +L +L +YV+RMKE Q  IYY  GES + +E  P  E +K KGYE+LY  D +DE+A+  L +++ K+  S +                             +K+VL                P CL + +   +  ME+++K     +N     + ++K +EIN  + +   + K A  D  DK  K   LL
Sbjct:  378 KFFNSFGRQLKYGVYSDFGSNKEVLQDLLMFYSSTE-KKLVTLDEYVSRMKEDQKYIYYAAGESNEKIEKLPQTEVVKDKGYEILYFTDDVDEFAIKMLMKYKEKEFKSVSNKDLGFEADEKESKKETEENKDLF---DFMKEVLDGKVKEVRASSRLKSHPVCL-SNDGELSIEMEKVLKMMPDNNN-----VKAEKILEINTNHEMFNSI-KAAFKDDKDKLKKYASLL 597          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_CHLPD9.705e-2025.76Chaperone protein htpG OS=Chlorobium phaeobacteroi... [more]
HTPG_BACA29.705e-2030.00Chaperone protein htpG OS=Bacillus amyloliquefacie... [more]
HS904_HUMAN9.705e-2070.97Putative heat shock protein HSP 90-alpha A4 OS=Hom... [more]
HTPG_CLOPE1.268e-1929.15Chaperone protein htpG OS=Clostridium perfringens ... [more]
HTPG_CLOP11.268e-1929.15Chaperone protein htpG OS=Clostridium perfringens ... [more]
HTPG_POLSJ2.162e-1945.79Chaperone protein htpG OS=Polaromonas sp. (strain ... [more]
HTPG_KLEP72.162e-1947.71Chaperone protein htpG OS=Klebsiella pneumoniae su... [more]
HTPG_CLOPS2.824e-1928.70Chaperone protein htpG OS=Clostridium perfringens ... [more]
HTPG_ERWCT3.688e-1945.05Chaperone protein htpG OS=Erwinia carotovora subsp... [more]
HTPG_CLOAB4.817e-1929.44Chaperone protein htpG OS=Clostridium acetobutylic... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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