FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_BUCAI (Chaperone protein htpG OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=htpG PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19
Identity = 65/213 (30.52%), Postives = 94/213 (44.13%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 634
            F+  F   LK G  ED  N  K+A LLR+ S KS   ++  SLK+Y++ M E Q  IYYIT +S  +  NSP LE  KK   +VL + D IDE+ +  L EFEGKK  S +                            K +K++LG               PC L++     T  M ++  A              K   EINP++ +++++
Sbjct:  374 FWNQFGLVLKEGPAEDHENLNKIANLLRFTSMKSNNSEQKMSLKEYISNMNEQQEKIYYITADSYSSANNSPHLELFKKNNIDVLLLSDRIDEWMMNYLSEFEGKKFQSISKEDISLNKLTKEKKIKNKDVSTEMIEFLKKVKNILGNQVKDVRLTHRLTETPCVLLSDSTEMTTQMAKLFSAAG------QSVPELKYIFEINPDHILIKKI 580          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_WOLSU (Chaperone protein htpG OS=Wolinella succinogenes GN=htpG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 60/218 (27.52%), Postives = 100/218 (45.87%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADK 658
            F++ F + LK G++ D  NK KL EL+R+HS+ S ++  SL+ Y  RMKEGQ  IYY+ GE+   ++NSP LEK KK+  EVL+  + ID   +  + ++    L +                             +  +  L                P C+V  E      M ++M+      N++  +   K  +E+NPE+P++ +L    D ++
Sbjct:  368 FFKEFGRALKEGLYGDFENKEKLLELMRFHSSLSPNKKISLQSYKERMKEGQKAIYYLMGENADLLQNSPLLEKFKKREIEVLFFDEEIDSIVMPMVNQYGDLPLKAIN--SAEADKDFEEESVSEEEKERFKPLLERFEKALSGEIKSVRLSKRLVDSPACVVADEDDPNFAMIKMMRQMG---NALGDFPEPKPILELNPEHPMVGKLLALEDEER 580          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RICCK (Chaperone protein htpG OS=Rickettsia canadensis (strain McKiel) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 67/234 (28.63%), Postives = 107/234 (45.73%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KF+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT                           K++    K+ LG               P CL   E      MER +  Q    N      +S K +E+NP+N I+E++    D   N+K+ K+LV L
Sbjct:  365 KFWSNFGGALKEGLCESTTDHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVEQTTSSSEEKNTDSKKSDDEYKLLTDYFKETLGDLVKDVKISKKLTSSPACLAVSESAMDIRMERFLIEQKQIAN------ASAKNLELNPKNKIIEKIFN--DLKANNKNNKELVNL 589          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_GLUOX (Chaperone protein htpG OS=Gluconobacter oxydans GN=htpG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19
Identity = 66/225 (29.33%), Postives = 111/225 (49.33%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 679
            F+E+F   +K G+ ED+ ++T++A   R+HST S D+L +L DY++RMK+GQ+ IYY+TG+S  A+++S  LE  + +G EVL + D +D +   +L  ++ K L S T                             +KD LG                  ++T + G    M+R+M+       S     +    +EINP++P+++ L +R       +SVKD
Sbjct:  374 FWENFGAVIKEGLWEDAEHRTEIAGFARFHSTYS-DDLITLDDYISRMKDGQDAIYYLTGDSLDALKSSAQLEGFRARGLEVLLLSDPVDGFWPERLSSYQEKPLRSVT-HSHGDLEKFESVEADTTEAADVEKLVPALKDALG-DQVKDVRSTVRLTGSAVVITSDGGPDLTMQRLMR------RSGQAMPAMPPILEINPKHPLIKALAERV---AKGESVKD 586          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_SODGM (Chaperone protein htpG OS=Sodalis glossinidius (strain morsitans) GN=htpG PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18
Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTK--SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 331
            F++ F   LK G  ED TN   +A+LLR+ ST   S  +  SL++YV RM EGQ  IYYIT +S  A ++SP LE L+KKG EVL   D IDE+ +  L EF+GK   S +
Sbjct:  378 FWQEFGLVLKEGAGEDPTNGEAVAKLLRFASTHGDSPAQTVSLEEYVGRMVEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLFSDRIDEWMMSYLTEFDGKAFQSVS 488          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_HELAH (Chaperone protein htpG OS=Helicobacter acinonychis (strain Sheeba) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18
Identity = 47/102 (46.08%), Postives = 67/102 (65.69%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFE 307
            KFYE F K LK G++ D  NK KL ELLR++S K  ++L SLK+Y   +KE Q  IYY+ GE+   ++ SP LEK  +KGY+VL + D ID + +  + E++
Sbjct:  377 KFYEPFGKVLKEGLYGDFENKEKLLELLRFYS-KDKEKLISLKEYKENLKENQKSIYYLLGENLDLLKASPILEKYAQKGYDVLLLSDEIDAFVMPSVNEYD 477          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_BACLD (Chaperone protein htpG OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=htpG PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18
Identity = 63/220 (28.64%), Postives = 105/220 (47.73%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 661
            FY+SF + LK G++ D   +K  L +LL ++S+K   +L +L++YV+RM E Q  IYY +G+S   +E  P  E + +KGYE+LY  + IDE+A+  L  ++ K+  S +                           ++ K + G                C    GE   T  ME+I+   A+ DN    ++ + K +EIN  + + + L+   D DK+
Sbjct:  379 FYQSFGRQLKFGVYNDFGAHKDLLKDLLLFYSSKE-KKLVTLEEYVSRMPEDQKYIYYASGDSYDRIEKLPQTELVSEKGYEILYFTEDIDEFAIKMLANYQEKEFKSVSSGDLGIENDDEQNQSDGDDSQYKDLFEEMKKTLDGKVKSVRASKRLKTHSVCLAADGEV--TIEMEKIL--NAMPDNQ---HVKADKVLEINTNHEVFKTLQNAFDNDKD 590          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_HELPY (Chaperone protein htpG OS=Helicobacter pylori GN=htpG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18
Identity = 47/102 (46.08%), Postives = 67/102 (65.69%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFE 307
            KFYE F K LK G++ D  NK KL ELLR++S K  ++L SLK+Y   +KE Q  IYY+ GE+   ++ SP LEK  +KGY+VL + D ID + +  + E++
Sbjct:  377 KFYEPFGKVLKEGLYGDFENKEKLLELLRFYS-KDKEKLISLKEYKENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYD 477          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_BACHD (Chaperone protein htpG OS=Bacillus halodurans GN=htpG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18
Identity = 62/221 (28.05%), Postives = 105/221 (47.51%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 661
            +FY SF + LK G++ D   NK  L +LL ++S+    ++ +L +YV+RMKE Q  IYY TGES   +E  P  E +  KGYE+LY  + +DE+A+  L  ++ K+  S +                           + +K +L                P CL T E   +  ME++++A     N     + ++K +EIN  + + + L+   ++DK+
Sbjct:  378 QFYRSFGRQLKYGVYSDFGANKEDLQDLLLFYSSTE-KKMVTLDEYVSRMKEDQPYIYYATGESYARIEKLPQTEMVADKGYEILYFTEDVDEFAIKMLASYKEKEFRSVSSGDLGFEDDEQKDTAADTDEQKELF--EHMKTILDGKVKDVRASKRLKSHPVCL-TAEGEVSIEMEKVLRAMPDNQN-----VQAEKVLEINVNHDVFDVLKASFESDKD 589          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_ALKOO (Chaperone protein htpG OS=Alkaliphilus oremlandii (strain OhILAs) GN=htpG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18
Identity = 66/221 (29.86%), Postives = 107/221 (48.42%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKND 664
            F+E+F + LK GI+ +  +NK  L +LL ++S+K   +L +L +Y++RM E Q  IYY TGESK+ +E  P  E + +KG+E+LY+ + IDE+A+  L  ++ K+  S +                           K+   +L                P CL   E   +  ME+I+ A    +N     + + K +EIN  + + E L+   DA KND
Sbjct:  379 FFEAFGRQLKYGIYSEFGSNKDVLQDLLLFYSSKE-KKLVTLDEYISRMSEEQKYIYYATGESKERIEKLPQTELVSEKGFEILYLTEDIDEFAIKVLMSYKDKEFKSVSSSDLGIEDSETEKNTETEELENKELFEKMTA-LLSDKVTAVRISKRLKSHPVCL-ANEGEISIEMEKILSAMPNNEN-----IKANKILEINGNHQVFEVLK---DAYKND 588          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_BUCAI4.817e-1930.52Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_WOLSU8.216e-1927.52Chaperone protein htpG OS=Wolinella succinogenes G... [more]
HTPG_RICCK8.216e-1928.63Chaperone protein htpG OS=Rickettsia canadensis (s... [more]
HTPG_GLUOX8.216e-1929.33Chaperone protein htpG OS=Gluconobacter oxydans GN... [more]
HTPG_SODGM1.401e-1847.75Chaperone protein htpG OS=Sodalis glossinidius (st... [more]
HTPG_HELAH1.401e-1846.08Chaperone protein htpG OS=Helicobacter acinonychis... [more]
HTPG_BACLD1.401e-1828.64Chaperone protein htpG OS=Bacillus licheniformis (... [more]
HTPG_HELPY2.391e-1846.08Chaperone protein htpG OS=Helicobacter pylori GN=h... [more]
HTPG_BACHD2.391e-1828.05Chaperone protein htpG OS=Bacillus halodurans GN=h... [more]
HTPG_ALKOO2.391e-1829.86Chaperone protein htpG OS=Alkaliphilus oremlandii ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
back to top