FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RICBR (Chaperone protein htpG OS=Rickettsia bellii (strain RML369-C) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17
Identity = 66/233 (28.33%), Postives = 106/233 (45.49%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            F+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT                           K +    K+VLG               P CL   E      MER +  Q    N      +S K +E+NP+N I+E++    D   N+K+ ++LV L
Sbjct:  366 FWANFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIKGFKEGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHTIKSATRSDIDVDQATSSSEEKNKDDKKSDDEYKSLTDYFKEVLGILVKDVKISKKLTSSPACLAVSEAAMDIRMERFLIEQKQIAN------ASAKNLELNPKNKIIEKIFN--DLKANNKNNEELVKL 589          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RICB8 (Chaperone protein htpG OS=Rickettsia bellii (strain OSU 85-389) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17
Identity = 66/233 (28.33%), Postives = 106/233 (45.49%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            F+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT                           K +    K+VLG               P CL   E      MER +  Q    N      +S K +E+NP+N I+E++    D   N+K+ ++LV L
Sbjct:  366 FWANFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIKGFKEGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVDQATSSSEEKNKDDKKSDDEYKSLTDYFKEVLGILVKDVKISKKLTSSPACLAVSEAAMDIRMERFLIEQKQIAN------ASAKNLELNPKNKIIEKIFN--DLKANNKNNEELVKL 589          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_DESVH (Chaperone protein htpG OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17
Identity = 66/238 (27.73%), Postives = 109/238 (45.80%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEF-----------EGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKD 679
            F+    K  KLG + D  N+ K A LLR++S+   D   LTSL DY++R +EGQ +I+YI    ++A    P +E  ++KG EVLY+++ IDE+ +  L  +           +G+KL                               + +K +LG               P CLV      T++M+R+++    +D S+      +K  E+N ++PI+  L K   +D +D  V+D
Sbjct:  368 FWRQHGKVFKLG-YSDYANREKFAPLLRFNSSHHDDAQGLTSLDDYISRAREGQKEIWYIAAPGREAARLDPRVEVFRRKGLEVLYLLEPIDEFVLETLDSYSDFSFKAVEHADGEKLAQ----FEDTGPARDVTPLTEDEDAAFARLIERMKALLGDAVEDVRISHRLADSPACLVQPGGASTSSMDRLLRV-LHKDESV-----PRKVFEVNRDHPILRNLLKVFTSDASDPLVED 594          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RICFE (Chaperone protein htpG OS=Rickettsia felis GN=htpG PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 64/234 (27.35%), Postives = 108/234 (46.15%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KF+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT                           K++    K+ LG               P CL   +      MER +    +    +A   +S K +E+NP+N I+E++    D   N+K+ ++LV L
Sbjct:  365 KFWANFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIAGFKEGQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVEQTTSQSEEKNADSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFL----IEQKQIAA--ASAKNLELNPKNKIIEKIFN--DLKANNKNNEELVNL 589          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_EHRCJ (Chaperone protein htpG OS=Ehrlichia canis (strain Jake) GN=htpG PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 63/222 (28.38%), Postives = 100/222 (45.05%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTN--KTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEG---KKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV---IK---DVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 634
            KF+E+F   LK G+ E      + +L    R++ST S D L SL+DY+ RMKEGQ++IYY+TG    +++ SP LE    +G EV+ ++D +D++    + +++    K ++ A                            KV   +K    VL                P CL   +      MER      LR+     Y S+ K +EINP++PI+  +
Sbjct:  371 KFWENFGSVLKEGLCESMNTEFREELLSACRFYSTNSDDSLISLEDYIERMKEGQDNIYYLTGNDLDSIKKSPQLEGFVSRGIEVILLIDPVDDFWTNVVTDYQRVPLKSVIRADEDLEKLAHLKKDEEVGESKDENPDSKEKVDAFVKYAIQVLDKLVSGVRVSKKLTNSPVCLAVADGSMDIRMERF-----LREQKQLNYKST-KILEINPKHPIVSRM 586          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_METPB (Chaperone protein htpG OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17
Identity = 65/223 (29.15%), Postives = 100/223 (44.84%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKS 670
            KF+E+F   LK GI+ED   + ++A LLR+ S+  G   TSL DYV+RMK  Q  IYY+  +  +A++NS  LE  + +G EVL + D +D +   QL +FE K L S T                             +K  L                   L     G    M+R+++       +  G+  S   +EINP + ++  L  RA+A ++ K+
Sbjct:  370 KFFENFGSVLKEGIYEDFERRAEIAPLLRFRSSTEGG-WTSLPDYVSRMKPEQEAIYYLVADDVEALKNSAQLEGFRARGVEVLLLSDHVDAFWPEQLGKFEDKPLRSVTQGSADLAKLKPEGEAAEDAPALDRLVA-ALKLALEPDVSDVRVTDRLVDSAVVLAASGMGPDLQMQRLLR------RAGRGFGGSAPILEINPRHALIRSLNDRAEAGEDLKA 584          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_OCEIH (Chaperone protein htpG OS=Oceanobacillus iheyensis GN=htpG PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 43/111 (38.74%), Postives = 71/111 (63.96%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 331
            KF+++F + +K G++ D   NK +L +LL ++S+K   +L +L++YV+ M E Q  IYY TG+S+  +E  P  E +  KGYE+LY  D IDE+A+  L  ++ K+  S +
Sbjct:  378 KFFDAFGQQIKFGVYSDYGQNKDELKDLLLFYSSKE-KKLVTLEEYVSCMPEDQKYIYYATGDSRDRIEKLPQTELVADKGYEILYFTDEIDEFAIKMLMNYDEKEFRSVS 487          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_METEP (Chaperone protein htpG OS=Methylobacterium extorquens (strain PA1) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 65/223 (29.15%), Postives = 101/223 (45.29%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKS 670
            KF+E+F   LK GI+ED   + ++A LLR+ S+  G   TSL +YV RMK  Q  IYY+  +  +A++NS  LE  + +G EVL + D +D +   QL +FE K L S T                             +K  L                   L T   G    M+R+++       +  G+  S   +EINP + ++  L +RA+A ++ K+
Sbjct:  370 KFFENFGPVLKEGIYEDFERRGEIAPLLRFRSSTEGG-WTSLPEYVARMKPEQEAIYYLVADDVEALKNSAQLEGFRARGVEVLLLSDHVDAFWPEQLGKFEDKPLRSVTQGSADLAKLKPEGETAEAAPALDTLVA-ALKLALEPDVSDVRTTDRLVDSAVVLATSGMGPDLQMQRLLR------RAGRGFGGSAPILEINPRHALIRSLNERAEAGEDLKA 584          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_BORAP (Chaperone protein htpG OS=Borrelia afzelii (strain PKo) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16
Identity = 59/222 (26.58%), Postives = 99/222 (44.59%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 667
            +F + F + +K G++ D  N+ KL  L+R+ S+ S D   S K+Y  RM EGQ  IYYITG  +  ++ +P +   K+KG+E+L M D +DE  +  + E+EG KL +                               +K++L                P  ++      T  M++IM +       +      K  +E+NP N I++ L K  + +K +K
Sbjct:  370 EFSKEFGRCIKEGVYSDFENREKLISLIRFKSS-SVDGFVSFKEYKERMNEGQKSIYYITGGKENILKENPIVTAYKEKGFEILIMDDELDEAILNLIPEYEGLKLKAINKNETSNELKDENFKKIEEEFKDTLTR---VKEILKDQIKEVNLSATLIKEPSAIIVDSNDPTYQMQKIMLSMGQEVKEI------KPILELNPNNKIVQNL-KNLEPEKLEK 580          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_HELHP (Chaperone protein htpG OS=Helicobacter hepaticus GN=htpG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16
Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 325
            FYE F K LK G++ D  NK K+ ELLR+ S KS  E  SLK Y   M   Q  IYY+ GE+K A++N+P LEK  +KG++VL + D ID   +  + E++   L S
Sbjct:  377 FYEQFGKVLKEGLYGDYENKEKILELLRFDSFKS--EYISLKAYKESMGNEQKSIYYMLGENKDALKNAPLLEKFAQKGFDVLLLSDEIDAIVMPMVGEYDKVPLKS 481          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_RICBR2.643e-1728.33Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_RICB82.643e-1728.33Chaperone protein htpG OS=Rickettsia bellii (strai... [more]
HTPG_DESVH3.452e-1727.73Chaperone protein htpG OS=Desulfovibrio vulgaris (... [more]
HTPG_RICFE4.508e-1727.35Chaperone protein htpG OS=Rickettsia felis GN=htpG... [more]
HTPG_EHRCJ4.508e-1728.38Chaperone protein htpG OS=Ehrlichia canis (strain ... [more]
HTPG_METPB5.888e-1729.15Chaperone protein htpG OS=Methylobacterium populi ... [more]
HTPG_OCEIH7.690e-1738.74Chaperone protein htpG OS=Oceanobacillus iheyensis... [more]
HTPG_METEP7.690e-1729.15Chaperone protein htpG OS=Methylobacterium extorqu... [more]
HTPG_BORAP1.004e-1626.58Chaperone protein htpG OS=Borrelia afzelii (strain... [more]
HTPG_HELHP1.312e-1644.86Chaperone protein htpG OS=Helicobacter hepaticus G... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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