FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_WOLTR (Chaperone protein htpG OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=htpG PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16
Identity = 67/239 (28.03%), Postives = 106/239 (44.35%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHE--DSTNKTKLAELLRYHSTKSGDE-LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT------XXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KF+ +F   LK G+ E   +  +  L  + R+HST  GD+ L S+ DY++RMK  Q  IYY+TG S  +V+NSP LE    KG EVL  VD +D++    + E++G+K  S T                                 +    VLG               P CL   E      MER      LR+ +   Y  + K +E+N ++ +++ + K    +  + +++D+V L
Sbjct:  375 KFWTNFGAVLKEGLCEAMPTEEREALLSICRFHST--GDKKLVSIDDYISRMKPEQGYIYYLTGNSLDSVKNSPQLEGFISKGLEVLLFVDPVDDFWTSVIHEYKGQKFKSVTRADVDLEKFSPEEKDKENKSDEERAEGNTDSILQYFTKVLGNAVKSVKISKKLTDSPVCLAVDEGAMDLRMERF-----LREQNQLNY-RTPKVLEVNTKHSVIKSIIKSYAENGENPTLEDMVHL 605          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPA (Chaperone protein htpG OS=Rhodopseudomonas palustris GN=htpG PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16
Identity = 68/235 (28.94%), Postives = 99/235 (42.13%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-----ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            K +++F   LK G++ED   + KL  L R+  T +  E  SLK YV  MKE Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      +F GK L S                                   VIKD LG                 CLV G  G    +E+++     R N  AG   SK  +EIN ++P++  L    D   +     DL  L
Sbjct:  371 KIWDAFGPVLKEGLYEDFERREKLLSLARF--TTTAGEKRSLKQYVEAMKENQTEIYYLVGDSLERLKSNPKLESATARGIEVLLLTDPVDAFWTSGQLDFGGKPLKSLSQGDVNFDLIPKLEQDQDKDNKDEAKVDEATVIAVIKDALGERVSDVKASQRLTSSASCLVAGGMGPDRELEKLL----ARANKGAG---SKPILEINLQHPLVAAL---GDTKTDKAEAADLAFL 593          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_NITHX (Chaperone protein htpG OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=htpG PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16
Identity = 62/233 (26.61%), Postives = 97/233 (41.63%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCK---VIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            K +E+F    K GI++ +  +  +  L R+ +T     L SLKDYV  +K+ Q  IYY+ G+    +E SP LE  + +G EVL + D +D + V     FEGK   S T                           +    +K  L                P CL+  E G    +E+I+    +    + G  +SK  +E+NP +P++  L    D D+  K     +LL
Sbjct:  380 KVWEAFGPMFKEGIYDAADRRDAILSLCRFRTTAGS--LRSLKDYVGALKDNQTSIYYLAGQDAARLEASPHLEGFRARGVEVLLLSDPVDSFWVTSAPSFEGKPFKSVTQGDTDLAAIPRVDASAETLQEVSASVTEFLAFLKTTLADLVSDVRSSERLTDSPVCLIAAESGPDRQLEKIL----VGVGQLTG--ASKPVLEVNPRHPLIASLAALGDGDRAFKEDTARMLL 604          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_NITWN (Chaperone protein htpG OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16
Identity = 65/233 (27.90%), Postives = 97/233 (41.63%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCK---VIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            K +E+F    K GI++ +  +  +  L R+ +T     L SLKDYV  +KE Q  IYY+ G+    +E SP LE  + +G EVL + D +D + V     FEGK   S T                           +    +K  L                P CLV  E G    +E+I+    L    +AG  +SK  +E+NP +P++  L      D+  K     +LL
Sbjct:  375 KIWEAFGPMFKEGIYDAADRRDTVLGLSRFRTTAGS--LRSLKDYVGALKENQTSIYYLAGQDAARLEASPHLEGFRARGVEVLLLSDPVDSFWVTSGPSFEGKPFKSVTQGAADLAAIPRLDAGTEPSPDVSEGVTEFLAFLKTTLSDLVSDVRSSDRLTDSPVCLVAAESGPDRQLEKIL----LGVGQLAG--ASKPVLEVNPNHPLVASLAALGQDDREFKEDAARMLL 599          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_EHRCR (Chaperone protein htpG OS=Ehrlichia chaffeensis (strain Arkansas) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16
Identity = 62/222 (27.93%), Postives = 95/222 (42.79%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTN--KTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSA---------TXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 634
            KF+E+F   LK G+ E      + +L    R++ST S D L SL+DY+ RMK GQ++IYY+TG    +V+ SP LE    +G EV+ +VD +D++    + +++   L S                                      K    VL                P CL   +      MER      LR+     Y S+ K +EINP++PI+ ++
Sbjct:  371 KFWENFGSVLKEGLCESMNTEFREELMSACRFYSTYSDDSLISLEDYIERMKAGQDNIYYLTGNDLDSVKKSPQLEGFISRGIEVILLVDPVDDFWTNVVTDYQKVPLKSVIRADEDLEKLAHLDKSEEIKENEDESVDSKEKVDTFVKYAAQVLDKLVSSVRVSKKLTNSPVCLAVADGSMDIRMERF-----LREQKQLNYKST-KILEINPKHPIVTKM 586          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_CLOTE (Chaperone protein htpG OS=Clostridium tetani GN=htpG PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16
Identity = 58/221 (26.24%), Postives = 98/221 (44.34%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 661
            KFY +F + LK G++ D   NK  L +L+ ++S+    +L +L +YV+RMK+ Q  IYY  GE+   +E  P  E ++ KGYE+LY  D +DE+A+  L  ++ K+  S                             + +KDVL                P CL       +  ME+++      +N     + + K +EIN  + +   ++     DK+
Sbjct:  378 KFYNNFGRQLKYGVYSDFGANKEVLQDLIMFYSSTE-KKLVTLDEYVSRMKDDQKYIYYAPGENIDKIEKLPQTEIVRDKGYEILYFADEVDEFAIKMLMNYKEKEFKSV---YSKDLGFEAEEKEEQKENDENKEVFEFMKDVLNGKVKEVRASKRLKSHPVCLANAS-DISIEMEKVLSMMPNNEN-----IKADKILEINTNHNMFNTIKSAFKDDKD 588          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_ARCB4 (Chaperone protein htpG OS=Arcobacter butzleri (strain RM4018) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16
Identity = 68/221 (30.77%), Postives = 97/221 (43.89%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKS-GDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYM----VDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRAD 649
            +F   + + LK G+++D TNK  + ELLRY S+K+   ++TSL+ Y  R    Q  IYYI GE++K + NSP LE  KK   EVL +    +D I   A+G  KE+E K + +                               IKD LG               P C+V       A+ +    A   R    A    S   +EINPE+ I+++L   AD
Sbjct:  385 EFVAQYIRPLKEGVYQDYTNKEAILELLRYKSSKTEAGKMTSLEAYKERANSEQKAIYYIVGENEKVLRNSPLLESYKKNDIEVLILDDKEIDEIITPAIGAFKEWEFKDITA-----IEPPKVEQSEEEKKEVEEKFQDILSKIKDKLGDAVKDVKVTSRLSESPSCVVKD----AADAQMAAMAHMFRAMGQA-MPESAPILEINPEHEIVKKLNGCAD 595          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_METC4 (Chaperone protein htpG OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.817e-16
Identity = 64/223 (28.70%), Postives = 100/223 (44.84%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKS 670
            KF+E+F   LK GI+ED   + ++A LLR+ S+  G   TSL +YV RMK  Q  IYY+  +  +A++NS  LE  + +  EVL + D +D +   QL +FE K L S T                             +K  L                   L T   G    M+R+++       +  G+  S   +EINP + ++  L +RA+A ++ K+
Sbjct:  370 KFFENFGPVLKEGIYEDFERRAEIAPLLRFRSSTEGG-WTSLPEYVARMKPEQEAIYYLVADDVEALKNSAQLEGFRARRVEVLLLSDHVDAFWPEQLGKFEDKPLRSVTQGSADLAKLKPEGETAEAAPALDTLVA-ALKLALEPDVSDVRTTDRLVDSAVVLATSGMGPDLQMQRLLR------RAGRGFGGSAPILEINPRHALIRSLNERAEAGEDLKA 584          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RICRS (Chaperone protein htpG OS=Rickettsia rickettsii (strain Sheila Smith) GN=htpG PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16
Identity = 63/234 (26.92%), Postives = 106/234 (45.30%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KF+ +F   LK G+ E +TN  KL E+  + S    +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT                           K++    K+ LG               P CL   +      MER +  Q    N      +S K +E+NP+N I+E++    D   N+K+ ++LV L
Sbjct:  365 KFWANFGGALKEGLCEATTNHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEAKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQKQIAN------ASAKNLELNPKNKIIEKIFN--DLKANNKNNEELVNL 589          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RICRO (Chaperone protein htpG OS=Rickettsia rickettsii (strain Iowa) GN=htpG PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16
Identity = 63/234 (26.92%), Postives = 106/234 (45.30%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KF+ +F   LK G+ E +TN  KL E+  + S    +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT                           K++    K+ LG               P CL   +      MER +  Q    N      +S K +E+NP+N I+E++    D   N+K+ ++LV L
Sbjct:  365 KFWANFGGALKEGLCEATTNHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEAKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQKQIAN------ASAKNLELNPKNKIIEKIFN--DLKANNKNNEELVNL 589          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_WOLTR1.713e-1628.03Chaperone protein htpG OS=Wolbachia sp. subsp. Bru... [more]
HTPG_RHOPA1.713e-1628.94Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_NITHX1.713e-1626.61Chaperone protein htpG OS=Nitrobacter hamburgensis... [more]
HTPG_NITWN2.237e-1627.90Chaperone protein htpG OS=Nitrobacter winogradskyi... [more]
HTPG_EHRCR2.237e-1627.93Chaperone protein htpG OS=Ehrlichia chaffeensis (s... [more]
HTPG_CLOTE2.922e-1626.24Chaperone protein htpG OS=Clostridium tetani GN=ht... [more]
HTPG_ARCB42.922e-1630.77Chaperone protein htpG OS=Arcobacter butzleri (str... [more]
HTPG_METC43.817e-1628.70Chaperone protein htpG OS=Methylobacterium chlorom... [more]
HTPG_RICRS4.985e-1626.92Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_RICRO4.985e-1626.92Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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