FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RICCN (Chaperone protein htpG OS=Rickettsia conorii GN=htpG PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16
Identity = 63/234 (26.92%), Postives = 106/234 (45.30%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KF+ +F   LK G+ E +TN  KL E+  + S    +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT                           K++    K+ LG               P CL   +      MER +  Q    N      +S K +E+NP+N I+E++    D   N+K+ ++LV L
Sbjct:  365 KFWANFGGALKEGLCEATTNHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKKIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEEKNTDSTKSNDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQKQIAN------ASAKNLELNPKNKIIEKIFN--DLKANNKNNEELVNL 589          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_NATTJ (Chaperone protein htpG OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=htpG PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16
Identity = 57/221 (25.79%), Postives = 106/221 (47.96%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 661
            +F+ESF   LK GI+ +   NK  L +LL ++S+K  +++ SL +Y++RM E Q  IYY TGES + ++  P  E +K KGYEVLY+ + +DE+A+  +  ++  +  S +                             + ++L                P CL   E   +  ME+++++     N     + ++K +EIN  + + ++L +  + D++
Sbjct:  380 EFFESFGTLLKYGIYSEFGQNKETLQDLLLFYSSKE-NKMVSLDEYISRMGEDQKYIYYATGESVERIDKLPQTEFVKDKGYEVLYLTEDVDEFAIKMMGSYQDVEFKSVSSKDLGLDSEDEETSDEKEKEYKGMF--DKMAEILSDKVNTVRASERLKDHPVCL-ANEGEISIEMEKVLQSMPNNQN-----VQAEKALEINVNHDVFDKLTEAYEQDED 591          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_BORBU (Chaperone protein htpG OS=Borrelia burgdorferi GN=htpG PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16
Identity = 58/222 (26.13%), Postives = 98/222 (44.14%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 667
            +F + F + +K G++ D  N+ KL  L+R+ S+ S D   S K+Y  RM E Q  IYYITG  +  ++ +P +   K+KG+E+L M D +DE  +  + E+EG KL +                               +K++L                P  ++      T  M++IM +       +      K  +E+NP N I++ L K  + +K +K
Sbjct:  370 EFSKEFGRCIKEGVYSDFENREKLISLIRFKSS-SVDGFVSFKEYKERMNESQKSIYYITGGKENILKENPIVAAYKEKGFEILIMDDELDEAILNLIPEYEGLKLKAINKNETSNELKDENFKKIEEEFKDTLTK---VKEILKDHIKEVNLSATLIKEPSAIIIDSNDPTYQMQKIMLSMGQEVKEI------KPILELNPNNKIVQNL-KNLEPEKLEK 580          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RICAH (Chaperone protein htpG OS=Rickettsia akari (strain Hartford) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16
Identity = 63/234 (26.92%), Postives = 105/234 (44.87%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KF+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KE QN IYY++G++   + +SP +E L  K  +VL   D +D++ V    E++G  + SAT                           K++    K+ LG               P CL   +      MER +  Q           +S K +E+NP+N I+E++    D   N+K+ ++LV L
Sbjct:  365 KFWANFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIAGFKEEQNTIYYLSGDNPDKLLSSPQIEGLLSKNIDVLLFTDTVDDFWVNVNSEYKGHAIKSATRSDIDVEQTTSQSEDKNTHSKKSDDEYKLLTDYFKETLGKLVKEVKISKKLTSSPACLAVSDSAMDIRMERFLIEQKQIT------AASAKNLELNPKNKIIEKIFN--DLKANNKNNEELVNL 589          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_EHRRG (Chaperone protein htpG OS=Ehrlichia ruminantium (strain Gardel) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16
Identity = 61/222 (27.48%), Postives = 98/222 (44.14%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTN--KTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEG---KKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIK------DVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 634
            KF+++F   LK G+ E      + +L  + R++ST S D L SL+DY+ RMK  QN+IYY+TG    +++ SP LE    +G EVL +VD +D++    + +++    + ++ A                            KV K       VL                P CL   +      MER      LR+     Y S+ K +EIN ++PI+ ++
Sbjct:  372 KFWDNFGSVLKEGLCESMNTEFREELISVCRFYSTHSNDSLISLEDYIERMKPEQNNIYYLTGNDLDSIKKSPQLEGFVSRGVEVLLLVDPVDDFWTNVVTDYQKVPLRSVIRADEDLEKFSDVEKGDESKDSQNEDTQSKEKVDKFIGYAAQVLNNLVSNVRVSKKLTDSPVCLAVADGSMDIRMERF-----LREQKQLNYKST-KILEINSKHPIISKM 587          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_BUCCC (Chaperone protein htpG OS=Buchnera aphidicola subsp. Cinara cedri GN=htpG PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.502e-16
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSG--DELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 331
            KF+  F   +K GI EDS NKT L+ LLR+ S K G  ++  SL +Y+  MK+ Q  IY+IT +S K+  NSP LE  K+   +VL + + IDE+ +  L EF   K  S +
Sbjct:  375 KFWNVFGIIIKEGIAEDSENKTILSNLLRFSSIKKGNIEQTLSLNEYIKNMKKNQKKIYFITSDSYKSALNSPNLEIFKENDIDVLILSEKIDEWMMNYLTEFNNIKFQSVS 486          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPS (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB5) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15
Identity = 67/235 (28.51%), Postives = 102/235 (43.40%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-----ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            + +E+F   LK G++ED   + KL  L R+  T +  E  +L  YV  MKE Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      +F GK L S                                   VIKD LG                 CLV G +G    +E+++     R N  A   ++K  +EIN  +P++  L   A ADK D +    +LL
Sbjct:  371 RIWEAFGPVLKEGLYEDYERREKLLALARF--TTTAGEKRTLSQYVEAMKENQTEIYYLVGDSIERLKSNPKLESATARGIEVLLLTDGVDAFWTSGQLDFGGKPLKSLSQGDVNFDLIPKLDADKPDDKPDETKADEATVIAVIKDALGERVSDVKASQRLTSSASCLVAGGFGPDRELEKML----ARANKGA---ATKPVLEINLGHPLVAALAD-AKADKADATDLSFLLL 595          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP5 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisA53) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15
Identity = 66/227 (29.07%), Postives = 102/227 (44.93%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV---IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSV 673
            K +++F   +K GI ED   + KL  L R+ +TK GD  T LK+YV  +++ Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      +F GK L S +                            V   IKD LG                 CL+ G  G    +ER M AQ  R        +SK  +EIN  +P++  + +  +AD  D S+
Sbjct:  371 KIWDAFGPVIKEGIWEDYERREKLLALSRFTTTK-GDNRT-LKNYVEDLRDNQTEIYYLVGDSLERLKSNPKLESAAARGIEVLLLTDPVDAFWTSAPLDFGGKPLKSLSQGDVNFDLIPTTDEAKDEQPKPETDEALVIATIKDALGERVSDVRASQRLTASASCLIAGGQGPDRALER-MLAQQNRGG------ASKPILEINLRHPLVAAIGRPGNADAADLSL 588          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RHIEC (Chaperone protein htpG OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.110e-15
Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 331
            F+++F   LK GI+ED   + +L  L R+H++ S +   SL +YV   KEGQ+ IYY+ G S   ++ SP LE  + +G EVL + D++D + V    EFEGK   S T
Sbjct:  374 FWKNFGPVLKEGIYEDYERRAQLMALARFHTSASPEGHRSLAEYVKDAKEGQDAIYYLAGGSLDQLKASPQLEGFRARGIEVLLLTDSVDSFWVVNAPEFEGKAFKSIT 482          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RHORT (Chaperone protein htpG OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15
Identity = 63/222 (28.38%), Postives = 98/222 (44.14%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEF--EGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKV------IKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRA 646
            F+E+F   LK GI+ED   K  L  L R+ +T S D   SL+  + RMKEGQ+ +YYITG+   A+  SP +E    +G EVL + D IDE+ V  + +      K V+                             K+      +K  LG               P CLV  E   + +++++     LR  +    +S  + +EINP + +++ L +RA
Sbjct:  367 FWENFGAVLKEGIYEDFERKEDLVALARFRTTAS-DTPVSLETVIGRMKEGQSALYYITGDDATALARSPQVEGFVARGVEVLLLTDPIDEFWVSAVPKVGDTALKAVAQGSADLERLALIDGKQPPDDAEHAPAETAKMDALIAAMKAALGTAVADVRVSARLTDSPVCLVAKEGAMSLHLQKL-----LRQANQGSELSGDRVLEINPRHALVKTLAERA 582          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_RICCN4.985e-1626.92Chaperone protein htpG OS=Rickettsia conorii GN=ht... [more]
HTPG_NATTJ4.985e-1625.79Chaperone protein htpG OS=Natranaerobius thermophi... [more]
HTPG_BORBU6.510e-1626.13Chaperone protein htpG OS=Borrelia burgdorferi GN=... [more]
HTPG_RICAH8.502e-1626.92Chaperone protein htpG OS=Rickettsia akari (strain... [more]
HTPG_EHRRG8.502e-1627.48Chaperone protein htpG OS=Ehrlichia ruminantium (s... [more]
HTPG_BUCCC8.502e-1641.96Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_RHOPS1.110e-1528.51Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_RHOP51.110e-1529.07Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_RHIEC1.110e-1540.37Chaperone protein htpG OS=Rhizobium etli (strain C... [more]
HTPG_RHORT1.450e-1528.38Chaperone protein htpG OS=Rhodospirillum rubrum (s... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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