FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RHOPB (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain BisB18) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15
Identity = 66/227 (29.07%), Postives = 99/227 (43.61%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXC---KVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSV 673
            K +++F   +K GI ED   + KL  L R+ +TK   E  +LK YV  +KE Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      +F GK L S +                                IKD LG                 CLV G  G    +ER++  Q    N  A   +SK  +E+N  +PI+  + K   AD  D S+
Sbjct:  371 KIWDAFGLVIKEGIWEDYERRDKLLALSRFTTTKG--ENRTLKQYVEDLKENQTEIYYLVGDSIERLKSNPKLESAAARGIEVLLLTDPVDAFWTSAPLDFGGKPLKSLSQGDVDFGQIPTTEENKDEQAKPETDEALTIAAIKDALGDKVSDVRASQRLTASASCLVAGGLGPDRALERMLAQQ----NRGA---ASKPILEVNLRHPIVAAVAKANAADAADLSL 588          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_EXIS2 (Chaperone protein htpG OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15
Identity = 42/110 (38.18%), Postives = 66/110 (60.00%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHED-STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 331
            FY++F + LK GI+ D    K  + +L+ +HS K   +L +L +YV  M E Q  IYY +GES   ++  P  E +K KG+++LY  + IDE+A+  L  ++GK+  S T
Sbjct:  378 FYQAFGRQLKFGIYNDYGMQKDTVKDLVLFHSAKE-KKLVTLAEYVAAMPEEQKYIYYASGESTDRLDKLPQSELVKDKGFDILYFTEEIDEFAIQMLLNYDGKEFKSVT 486          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_EHRRW (Chaperone protein htpG OS=Ehrlichia ruminantium (strain Welgevonden) GN=htpG PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15
Identity = 61/222 (27.48%), Postives = 98/222 (44.14%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTN--KTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEG---KKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIK------DVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEEL 634
            KF+++F   LK G+ E      + +L  + R++ST S D L SL+DY+ RMK  QN+IYY+TG    +++ SP LE    +G EVL +VD +D++    + +++    + ++ A                            KV K       VL                P CL   +      MER      LR+     Y S+ K +EIN ++PI+ ++
Sbjct:  372 KFWDNFGSVLKEGLCESMNTEFREELISVCRFYSTHSNDSLISLEDYIERMKPEQNNIYYLTGNDLDSIKKSPQLEGFVSRGIEVLLLVDPVDDFWTNVVTDYQKVPLRSVIRADEDLEKFSDVEKDDESKESQNEDAQSKEKVDKFISYAAQVLTNLVSNVRVSKKLTDSPVCLAVADGSMDIRMERF-----LREQKQLNYKST-KILEINSKHPIVSKM 587          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_WIGBR (Chaperone protein htpG OS=Wigglesworthia glossinidia brevipalpis GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15
Identity = 46/109 (42.20%), Postives = 67/109 (61.47%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 325
            F++ F   LK G  ED  N   + +L R+ ST   S ++  SL+DYV RM+ GQN I+YIT ++  + +N+P LEKLK+K  EVL + D IDE+ +  + EF+  K  S
Sbjct:  382 FWKEFGLILKEGPSEDIKNYENVIKLFRFSSTYINSENQEVSLEDYVKRMQSGQNKIFYITSDNYLSAKNNPHLEKLKEKKIEVLLLFDRIDEWMMNYMTEFKKIKFQS 490          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RICM5 (Chaperone protein htpG OS=Rickettsia massiliae (strain Mtu5) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15
Identity = 62/234 (26.50%), Postives = 106/234 (45.30%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVI----KDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            KF+ +F   LK G+ E +T+  KL E+  + S    +++ SL +Y+   KEGQ+ IYY++G++   + +SP +E L  K  +VL   D +D++ V    +++   + SAT                           K++    K+ LG               P CL   +      MER +  Q    N      +S K +E+NP+N I+E++    D   N+K+ ++LV L
Sbjct:  367 KFWANFGGALKEGLCEATTDHEKLLEVCIFRSALH-NKMISLDEYIANFKEGQSTIYYLSGDNPDKLLSSPQIEGLLSKEIDVLLFTDTVDDFWVNVNSKYKEHAIKSATRSDIDVEQTTSQSEEKNTDSKKSDDEYKLLTDYFKETLGELVKEVKISKKLTSSPACLAVSDAAMDIRMERFLIEQKQIAN------ASAKNLELNPKNKIIEKIFN--DLKANNKNNEELVNL 591          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RHIME (Chaperone protein htpG OS=Rhizobium meliloti GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15
Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 331
            K +E+F   +K GI+ED   + +L  L R+ +T   D+  +L DYV  MKEGQ+ IYY+TG++   ++ SP LE  + +G EVL +   +D + V    +F+GK   S T
Sbjct:  372 KIWENFGSVIKEGIYEDFERRGQLLALSRFRTTADDDKPRALSDYVKEMKEGQSAIYYLTGDNLAQLKASPQLEGFRARGIEVLLLTCPVDSFWVTTAPDFDGKPFKSIT 481          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_AZOC5 (Chaperone protein htpG OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.894e-15
Identity = 64/227 (28.19%), Postives = 98/227 (43.17%), Query Frame = 2
Query:    8 YESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS----LKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT----XXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIM-KAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKN 661
            + +F   LK G++ED   + +L  L R+ +T SG    +    LKDYV  +KE Q  IYYITG+  + VE++P LE  + +G EVL + D +D + V    ++EGK   S T                                 +K+ LG                 CLV  E G    +E+++  A  L D       ++K  +EINP +P++  L     +D N
Sbjct:  375 WSNFGAVLKEGLYEDYERRAQLLNLARFKTTTSGTAADTGWRTLKDYVADLKENQTAIYYITGDLAR-VEHAPQLEGFRARGVEVLLLPDQVDSFWVTAGVDYEGKPFKSVTQGAADLSLIPLPKSDEAETPEPEAKDTGDFIAFVKETLGDQVADVRASDRLTTSAVCLVAPESGIDRRLEKLLASAGRLGD-------AAKPVLEINPRHPLVAALAAHGASDSN 593          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_BRAJA (Chaperone protein htpG OS=Bradyrhizobium japonicum GN=htpG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15
Identity = 68/234 (29.06%), Postives = 98/234 (41.88%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT----XXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            K +++F   LK GI+ED   + KL  L R+ +T    E  SLK  V   K  Q +IYY+ G+S + ++++P LE    +G EVL + D +D +      EFEGK L S +                                VIK  LG                 CLV    G +  +ERI+  Q          M +K  +EIN  +P++  + K   A    K+V DL LL
Sbjct:  371 KIWDAFGAVLKEGIYEDFERREKLLALSRFTTTTG--EKRSLKQVVADFKPNQTEIYYLVGDSIERLKSNPRLEAATARGIEVLLLSDPVDAFWTSMPTEFEGKPLKSLSQGDLNLDLIPRVDATDEAKKDEPEADEAATIAVIKAALGERVSDVKASTRLTSSASCLVADSQGPSRELERILSQQNRG-------MRAKPVLEINLRHPMVGAITK---AQAGSKAVDDLSLL 592          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_ALCBS (Chaperone protein htpG OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=htpG PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15
Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDEL-TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSA 328
            KF+  F   +K G+ ED  N+  +A LLR+ ++K+ D + TSL  Y+      Q+ IYY+  ++  A   SP LE  +KKG EVL + D +DE+ VG L+ ++  KLV+A
Sbjct:  371 KFWAQFGSVIKEGVAEDRDNQQSIAALLRFATSKTPDSVSTSLDQYLESKPADQDCIYYLLADTPSAARQSPHLEVFRKKGIEVLLLSDPVDEWMVGYLESYKEVKLVNA 480          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_RHOP2 (Chaperone protein htpG OS=Rhodopseudomonas palustris (strain HaA2) GN=htpG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15
Identity = 67/235 (28.51%), Postives = 100/235 (42.55%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS-----ATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLL 691
            K +++F   +K G++ED   + KL  L R+  T +  E  SL  YV  MKE Q +IYY+ G+S   ++ +P LE    +G EVL + DA+D +      +F GK L S                                   VIKD LG                 CLV G +G    +E+++     R N  A   ++K  +EIN  +P++  L     ADK D +    +LL
Sbjct:  371 KIWDAFGPVIKEGLYEDYERREKLLSLARF--TTTAGEKRSLAQYVEAMKENQTEIYYLVGDSLDRLKANPKLESAAARGIEVLLLTDAVDAFWTSGGLDFGGKPLKSLSQGEVNFDLIPKLDADKAEDKPDEAKADEATVIAVIKDALGDRVSDVKASQRLTASASCLVAGGFGPDRELEKML----ARANKGA---ATKPVLEINLGHPLVAALAD-TKADKADATDLSFLLL 595          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_RHOPB1.450e-1529.07Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]
HTPG_EXIS21.450e-1538.18Chaperone protein htpG OS=Exiguobacterium sibiricu... [more]
HTPG_EHRRW1.450e-1527.48Chaperone protein htpG OS=Ehrlichia ruminantium (s... [more]
HTPG_WIGBR1.894e-1542.20Chaperone protein htpG OS=Wigglesworthia glossinid... [more]
HTPG_RICM51.894e-1526.50Chaperone protein htpG OS=Rickettsia massiliae (st... [more]
HTPG_RHIME1.894e-1538.18Chaperone protein htpG OS=Rhizobium meliloti GN=ht... [more]
HTPG_AZOC51.894e-1528.19Chaperone protein htpG OS=Azorhizobium caulinodans... [more]
HTPG_BRAJA3.231e-1529.06Chaperone protein htpG OS=Bradyrhizobium japonicum... [more]
HTPG_ALCBS3.231e-1539.09Chaperone protein htpG OS=Alcanivorax borkumensis ... [more]
HTPG_RHOP24.220e-1528.51Chaperone protein htpG OS=Rhodopseudomonas palustr... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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