FC920860

Overview
NameFC920860
Unique NameFC920860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_BAUCH (Chaperone protein htpG OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=htpG PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15
Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHST--KSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGK 313
            F++ F   +K G+ ED  N   +A LLR+ +T  KS ++  SL +YV+R+ E Q  IYYI  +S  A  +SP LE L+KKG EVL + + ID + +  L EF GK
Sbjct:  376 FWQHFGLVIKEGLAEDPNNSKSIARLLRFSTTHSKSMEQNVSLDEYVSRIAEQQEKIYYIIADSYAAANSSPHLELLQKKGIEVLLLHERIDAWMMNYLIEFNGK 480          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HS905_HUMAN (Putative heat shock protein HSP 90-alpha A5 OS=Homo sapiens GN=HSP90AA5P PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 48/130 (36.92%), Postives = 66/130 (50.77%), Query Frame = 2
Query:   44 HEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVL 433
            H+  TN  +    +++ S +   +L  LKD    MK  Q  IYYITGE+K  V NS F+E L+K G EV+YM++ ID+Y V QLKE E K +VS                            CK++KD+L
Sbjct:  137 HQSLTNNWEDHLAVKHFSVEG--QLEELKDSRRVMKANQKHIYYITGETKDQVANSAFVECLQKHGLEVIYMIELIDKYCVQQLKELESKTVVSVAKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDML 264          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: TRAP1_HUMAN (Heat shock protein 75 kDa, mitochondrial OS=Homo sapiens GN=TRAP1 PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14
Identity = 42/111 (37.84%), Postives = 68/111 (61.26%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTK--LAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 325
            KF+E +   ++ GI   +  + K  +A+LLRY S+     +LTSL +Y +RM+ G  +IYY+   ++   E+SP+ E +KKK  EVL+  +  DE  +  L+EF+ KKL+S
Sbjct:  439 KFFEDYGLFMREGIVTATEQEVKEDIAKLLRYESSALPSGQLTSLSEYASRMRAGTRNIYYLCAPNRHLAEHSPYYEAMKKKDTEVLFCFEQFDELTLLHLREFDKKKLIS 549          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: TRAP1_BOVIN (Heat shock protein 75 kDa, mitochondrial OS=Bos taurus GN=TRAP1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14
Identity = 41/111 (36.94%), Postives = 68/111 (61.26%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTK--LAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 325
            +F+E +   ++ GI   +  + K  +A+LLRY S+     +LTSL DY +RM+ G  +IYY+   ++   E+SP+ E +K+K  EVL+  +  DE  +  L+EF+ KKL+S
Sbjct:  438 RFFEDYGLFVREGIVTTAEQEVKEDIAKLLRYESSALPAGQLTSLSDYASRMQAGTRNIYYLCAPNRHLAEHSPYYEAMKRKNTEVLFCYEQFDELTLLHLREFDKKKLIS 548          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: TRAP1_RAT (Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus GN=Trap1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14
Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTK--LAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 325
            KF+E +   ++ GI   +    K  +A+LLRY S+     +LTSL DY +RM+ G  +IYY+   ++   E+SP+ E +K+K  EVL+  +  DE  +  L+EF+ KKL+S
Sbjct:  441 KFFEDYGLFMREGIVTTAEQDIKEDIAKLLRYESSALPAGQLTSLSDYASRMQAGTRNIYYLCAPNRHLAEHSPYYEAMKQKQTEVLFCYEQFDELTLLHLREFDKKKLIS 551          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: TRAP1_MOUSE (Heat shock protein 75 kDa, mitochondrial OS=Mus musculus GN=Trap1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 42/111 (37.84%), Postives = 67/111 (60.36%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHEDSTNKTK--LAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 325
            KF+E +   ++ GI   +    K  +A+LLRY S+     +LTSL DY +RM+ G  +IYY+   ++   E+SP+ E +K+K  EVL+  +  DE  +  L+EF+ KKL+S
Sbjct:  441 KFFEDYGLFMREGIVTTAEQDIKEDIAKLLRYESSALPAGQLTSLPDYASRMQAGTRNIYYLCAPNRHLAEHSPYYEAMKQKHTEVLFCYEQFDELTLLHLREFDKKKLIS 551          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_ANAPZ (Chaperone protein htpG OS=Anaplasma phagocytophilum (strain HZ) GN=htpG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 37/106 (34.91%), Postives = 68/106 (64.15%), Query Frame = 2
Query:    2 KFYESFSKNLKLGIHE--DSTNKTKLAELLRYHSTK-SGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEG 310
            KF+E+F   LK G+ E  D+ ++  +  + ++H++  +  EL SL DY++RMK GQ  I+Y++G+  ++ + SP +EKL   G EV+ +VD +D++    + E++G
Sbjct:  365 KFWENFGPVLKEGLCEAMDTESREGVLSVCKFHTSACAAGELVSLADYISRMKPGQESIFYLSGDDLESTKRSPQIEKLVSSGIEVILLVDPVDDFWTSVVSEYKG 470          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_BUCBP (Chaperone protein htpG OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=htpG PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDE--LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 331
            F++ F   LK G  EDS N+T ++ L+R+ S  +  +    SL++YV  MK+ Q  IY+IT ++  +  +SP LE  KKK  +VL + D IDE+ +  L E+  KK  S +
Sbjct:  375 FWKQFGLILKEGPAEDSENRTSISNLIRFSSLLNNTQKPTMSLENYVKNMKQNQEKIYFITADNYASAVSSPHLEFFKKKNIDVLILSDKIDEWMMNYLIEYNEKKFQSVS 485          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJE (Chaperone protein htpG OS=Campylobacter jejuni GN=htpG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 325
            F+++F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP LE+ K+K  EVL M D ID      L EFEG K VS
Sbjct:  370 FFKTFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPML-EFEGLKFVS 474          
BLAST of FC920860 vs. ExPASy Swiss-Prot
Match: HTPG_CAMJJ (Chaperone protein htpG OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 2
Query:    5 FYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVS 325
            F+++F K LK G++     K  L +L+ Y STK G+ L SL++Y   ++  Q +I+YI G ++  +  SP LE+ K+K  EVL M D ID      L EFEG K V+
Sbjct:  370 FFKTFGKVLKEGLYGFGGEKDSLLKLMLYKSTK-GENLRSLEEYKNDLQGEQKEIFYIAGNNESLLRTSPLLEEYKQKNIEVLLMDDEIDSLVTPML-EFEGLKFVA 474          
The following BLAST results are available for this feature:
BLAST of FC920860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
HTPG_BAUCH4.220e-1542.86Chaperone protein htpG OS=Baumannia cicadellinicol... [more]
HS905_HUMAN9.400e-1536.92Putative heat shock protein HSP 90-alpha A5 OS=Hom... [more]
TRAP1_HUMAN2.094e-1437.84Heat shock protein 75 kDa, mitochondrial OS=Homo s... [more]
TRAP1_BOVIN3.572e-1436.94Heat shock protein 75 kDa, mitochondrial OS=Bos ta... [more]
TRAP1_RAT6.093e-1437.84Heat shock protein 75 kDa, mitochondrial OS=Rattus... [more]
TRAP1_MOUSE7.958e-1437.84Heat shock protein 75 kDa, mitochondrial OS=Mus mu... [more]
HTPG_ANAPZ7.958e-1434.91Chaperone protein htpG OS=Anaplasma phagocytophilu... [more]
HTPG_BUCBP1.357e-1337.84Chaperone protein htpG OS=Buchnera aphidicola subs... [more]
HTPG_CAMJE1.773e-1341.12Chaperone protein htpG OS=Campylobacter jejuni GN=... [more]
HTPG_CAMJJ3.950e-1340.19Chaperone protein htpG OS=Campylobacter jejuni sub... [more]

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Properties
Property NameValue
Genbank descriptionC32013H09EF RVDevelop1 Citrus clementina cDNA clone C32013H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920860 ID=FC920860; Name=FC920860; organism=Citrus clementina; type=EST; length=691bp
GAAGTTTTATGAGTCATTCTCCAAGAACCTAAAGCTTGGTATCCATGAGG
ACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGATTATGTGACCAGAATGAA
GGAAGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTG
TTGAGAACTCCCCATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTG
CTCTACATGGTTGATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGA
GTTTGAGGGAAAGAAGCTTGTCTCAGCAACCAAAGAAGGTCTCAAGCTTG
ACGAGAGTGAAGATGAGAAGAAGAAGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAA
GGTTGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTG
GTGAGTATGGATGGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCC
TTGAGAGACAACAGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGA
GATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATG
CTGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTG
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